RNA–Protein interactions for RNA: ENST00000619449.1

MALAT1-215, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 794 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-215ENST00000619449 PRAM1Q96QH2 718 aa25.98■■□□□ 1.75
MALAT1-215ENST00000619449 ROCK2O75116 1388 aaKnown RBP25.96■■□□□ 1.75
MALAT1-215ENST00000619449 C14orf37Q86TY3 774 aa25.96■■□□□ 1.75
MALAT1-215ENST00000619449 CADPS2Q86UW7 1296 aa25.95■■□□□ 1.74
MALAT1-215ENST00000619449 CDC42BPGQ6DT37 1551 aa25.95■■□□□ 1.74
MALAT1-215ENST00000619449 MST1RQ04912 1400 aa25.93■■□□□ 1.74
MALAT1-215ENST00000619449 ILDR1Q86SU0 546 aaPredicted RBP25.92■■□□□ 1.74
MALAT1-215ENST00000619449 ADGRB2O60241 1585 aa25.91■■□□□ 1.74
MALAT1-215ENST00000619449 ATF3P18847 181 aa25.91■■□□□ 1.74
MALAT1-215ENST00000619449 SLAIN2Q9P270 581 aa25.91■■□□□ 1.74
MALAT1-215ENST00000619449 POGKQ9P215 609 aa25.89■■□□□ 1.74
MALAT1-215ENST00000619449 SAFB2Q14151 953 aaKnown RBP eCLIP25.88■■□□□ 1.731e-323■□□□□ 9.4
MALAT1-215ENST00000619449 PIP4K2BP78356 416 aa25.87■■□□□ 1.73
MALAT1-215ENST00000619449 FMN2Q9NZ56 1722 aa25.85■■□□□ 1.73
MALAT1-215ENST00000619449 C1orf167Q5SNV9 1468 aa25.85■■□□□ 1.73
MALAT1-215ENST00000619449 ROBO1Q9Y6N7 1651 aa25.85■■□□□ 1.73
MALAT1-215ENST00000619449 CARD11Q9BXL7 1154 aa25.85■■□□□ 1.73
MALAT1-215ENST00000619449 CENPJQ9HC77 1338 aaPredicted RBP25.83■■□□□ 1.73
MALAT1-215ENST00000619449 MINK1Q8N4C8 1332 aaPredicted RBP25.82■■□□□ 1.72
MALAT1-215ENST00000619449 QRICH2Q9H0J4 1663 aa25.8■■□□□ 1.72
MALAT1-215ENST00000619449 BRINP3Q76B58 766 aa25.8■■□□□ 1.72
MALAT1-215ENST00000619449 HIRIP3Q9BW71 556 aaPredicted RBP25.8■■□□□ 1.72
MALAT1-215ENST00000619449 SCAF1Q9H7N4 1312 aaKnown RBP25.79■■□□□ 1.72
MALAT1-215ENST00000619449 USP32Q8NFA0 1604 aa25.78■■□□□ 1.72
MALAT1-215ENST00000619449 WASLO00401 505 aaPredicted RBP25.78■■□□□ 1.72
MALAT1-215ENST00000619449 EIF3AQ14152 1382 aaKnown RBP25.78■■□□□ 1.72
MALAT1-215ENST00000619449 SBNO2Q9Y2G9 1366 aa25.77■■□□□ 1.72
MALAT1-215ENST00000619449 ANKARQ7Z5J8 1434 aa25.75■■□□□ 1.71
MALAT1-215ENST00000619449 TULP4Q9NRJ4 1543 aa25.74■■□□□ 1.71
MALAT1-215ENST00000619449 HSPA1LP34931 641 aa25.74■■□□□ 1.71
MALAT1-215ENST00000619449 ORAI2Q96SN7 254 aa25.74■■□□□ 1.71
MALAT1-215ENST00000619449 AHDC1Q5TGY3 1603 aaPredicted RBP25.74■■□□□ 1.71
MALAT1-215ENST00000619449 PRR36Q9H6K5 1346 aa25.73■■□□□ 1.71
MALAT1-215ENST00000619449 RGPD8O14715 1765 aaPredicted RBP25.72■■□□□ 1.71
MALAT1-215ENST00000619449 NHSL1Q5SYE7 1610 aa25.72■■□□□ 1.71
MALAT1-215ENST00000619449 NUTM2FA1L443 756 aa25.71■■□□□ 1.71
MALAT1-215ENST00000619449 CDK19Q9BWU1 502 aa25.71■■□□□ 1.71
MALAT1-215ENST00000619449 ATP7BP35670 1465 aa25.71■■□□□ 1.71
MALAT1-215ENST00000619449 USP47Q96K76 1375 aa25.7■■□□□ 1.71
MALAT1-215ENST00000619449 TESK2Q96S53 571 aa25.69■■□□□ 1.7
MALAT1-215ENST00000619449 ST20-MTHFSA0A0A6YYL1 179 aa25.68■■□□□ 1.7
MALAT1-215ENST00000619449 COL16A1Q07092 1604 aaPredicted RBP25.67■■□□□ 1.7
MALAT1-215ENST00000619449 ESCO1Q5FWF5 840 aa25.67■■□□□ 1.7
MALAT1-215ENST00000619449 PHLPP1O60346 1717 aa25.66■■□□□ 1.7
MALAT1-215ENST00000619449 KIF1AQ12756 1690 aa25.65■■□□□ 1.7
MALAT1-215ENST00000619449 TOPAZ1Q8N9V7 1692 aa25.64■■□□□ 1.7
MALAT1-215ENST00000619449 NUDT16Q96DE0 195 aaKnown RBP25.64■■□□□ 1.7
MALAT1-215ENST00000619449 EVC2Q86UK5 1308 aa25.63■■□□□ 1.69
MALAT1-215ENST00000619449 DDX17Q92841 729 aaKnown RBP25.63■■□□□ 1.69
MALAT1-215ENST00000619449 PHF8Q9UPP1 1060 aa25.62■■□□□ 1.69
MALAT1-215ENST00000619449 SOS2Q07890 1332 aaPredicted RBP25.62■■□□□ 1.69
MALAT1-215ENST00000619449 CABP2Q9NPB3 220 aa25.61■■□□□ 1.69
MALAT1-215ENST00000619449 PXDNQ92626 1479 aa25.6■■□□□ 1.69
MALAT1-215ENST00000619449 ITSN1Q15811 1721 aa25.6■■□□□ 1.69
MALAT1-215ENST00000619449 CCDC61Q9Y6R9 512 aa25.59■■□□□ 1.69
MALAT1-215ENST00000619449 NPHP3Q7Z494 1330 aa25.59■■□□□ 1.69
MALAT1-215ENST00000619449 FOXO3O43524 673 aa25.58■■□□□ 1.69
MALAT1-215ENST00000619449 SRPK2P78362 688 aaKnown RBP25.58■■□□□ 1.69
MALAT1-215ENST00000619449 PLEKHG3A1L390 1219 aa25.57■■□□□ 1.68
MALAT1-215ENST00000619449 PUS7Q96PZ0 661 aaKnown RBP25.56■■□□□ 1.68
MALAT1-215ENST00000619449 SLC24A1O60721 1099 aa25.55■■□□□ 1.68
MALAT1-215ENST00000619449 PMFBP1Q8TBY8 1022 aa25.55■■□□□ 1.68
MALAT1-215ENST00000619449 POLR3AO14802 1390 aaPredicted RBP25.55■■□□□ 1.68
MALAT1-215ENST00000619449 EIF4G2P78344 907 aaKnown RBP eCLIP25.54■■□□□ 1.68
MALAT1-215ENST00000619449 HSPA5P11021 654 aaKnown RBP25.53■■□□□ 1.68
MALAT1-215ENST00000619449 DISP3Q9P2K9 1392 aa25.53■■□□□ 1.68
MALAT1-215ENST00000619449 PPIP5K1Q6PFW1 1433 aa25.53■■□□□ 1.68
MALAT1-215ENST00000619449 ATAD2Q6PL18 1390 aa25.52■■□□□ 1.68
MALAT1-215ENST00000619449 JCADQ9P266 1359 aa25.51■■□□□ 1.67
MALAT1-215ENST00000619449 SHPRHQ149N8 1683 aa25.5■■□□□ 1.67
MALAT1-215ENST00000619449 KRT28Q7Z3Y7 464 aa25.5■■□□□ 1.67
MALAT1-215ENST00000619449 LRRC59Q96AG4 307 aaKnown RBP25.5■■□□□ 1.67
MALAT1-215ENST00000619449 TRPM3Q9HCF6 1732 aaPredicted RBP25.49■■□□□ 1.67
MALAT1-215ENST00000619449 ACEP12821 1306 aa25.49■■□□□ 1.67
MALAT1-215ENST00000619449 XPCQ01831 940 aaPredicted RBP25.49■■□□□ 1.67
MALAT1-215ENST00000619449 CABP1Q9NZU7 370 aa25.49■■□□□ 1.67
MALAT1-215ENST00000619449 SBNO1A3KN83 1393 aa25.47■■□□□ 1.67
MALAT1-215ENST00000619449 PNPLA6Q8IY17 1366 aa25.47■■□□□ 1.67
MALAT1-215ENST00000619449 TMF1P82094 1093 aa25.47■■□□□ 1.67
MALAT1-215ENST00000619449 NGDNQ8NEJ9 315 aaKnown RBP25.46■■□□□ 1.67
MALAT1-215ENST00000619449 SPATA31A3Q5VYP0 1347 aa25.45■■□□□ 1.66
MALAT1-215ENST00000619449 PSME1Q06323 249 aa25.45■■□□□ 1.66
MALAT1-215ENST00000619449 CPSF1Q10570 1443 aaKnown RBP25.45■■□□□ 1.66
MALAT1-215ENST00000619449 CD163L1Q9NR16 1453 aa25.44■■□□□ 1.66
MALAT1-215ENST00000619449 COL22A1Q8NFW1 1626 aaPredicted RBP25.44■■□□□ 1.66
MALAT1-215ENST00000619449 TNS3Q68CZ2 1445 aa25.43■■□□□ 1.66
MALAT1-215ENST00000619449 ALS2Q96Q42 1657 aa25.42■■□□□ 1.66
MALAT1-215ENST00000619449 SSH2Q76I76 1423 aa25.42■■□□□ 1.66
MALAT1-215ENST00000619449 AKAP12Q02952 1782 aa25.41■■□□□ 1.66
MALAT1-215ENST00000619449 SPATA31A6Q5VVP1 1343 aa25.39■■□□□ 1.66
MALAT1-215ENST00000619449 USP6P35125 1406 aa25.39■■□□□ 1.66
MALAT1-215ENST00000619449 SLC12A5Q9H2X9 1139 aa25.39■■□□□ 1.66
MALAT1-215ENST00000619449 BRD4O60885 1362 aaPredicted RBP25.39■■□□□ 1.65
MALAT1-215ENST00000619449 NINLQ9Y2I6 1382 aa25.39■■□□□ 1.65
MALAT1-215ENST00000619449 CDCA8Q53HL2 280 aa25.38■■□□□ 1.65
MALAT1-215ENST00000619449 LRP6O75581 1613 aa25.37■■□□□ 1.65
MALAT1-215ENST00000619449 C11orf95C9JLR9 678 aaPredicted RBP25.37■■□□□ 1.65
MALAT1-215ENST00000619449 ZNF692Q9BU19 519 aaPredicted RBP25.36■■□□□ 1.65
MALAT1-215ENST00000619449 MYOM1P52179 1685 aa25.36■■□□□ 1.65
MALAT1-215ENST00000619449 MED1Q15648 1581 aaPredicted RBP25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 150.2 ms