RNA–Protein interactions for RNA: ENST00000618548.4

PCSK6-217, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCSK6, Length 4,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-217ENST00000618548 CIZ1Q9ULV3 898 aaPredicted RBP25.21■■□□□ 1.63
PCSK6-217ENST00000618548 KDM2BQ8NHM5 1336 aa25.21■■□□□ 1.63
PCSK6-217ENST00000618548 PLEKHH1Q9ULM0 1364 aa25.21■■□□□ 1.63
PCSK6-217ENST00000618548 FGD1P98174 961 aa25.2■■□□□ 1.62
PCSK6-217ENST00000618548 DNMBPQ6XZF7 1577 aa25.2■■□□□ 1.62
PCSK6-217ENST00000618548 C14orf37Q86TY3 774 aa25.19■■□□□ 1.62
PCSK6-217ENST00000618548 STAC3Q96MF2 364 aa25.19■■□□□ 1.62
PCSK6-217ENST00000618548 INTS3Q68E01 1043 aaKnown RBP25.19■■□□□ 1.62
PCSK6-217ENST00000618548 CAMSAP2Q08AD1 1489 aa25.19■■□□□ 1.62
PCSK6-217ENST00000618548 RTF1Q92541 710 aaKnown RBP25.17■■□□□ 1.62
PCSK6-217ENST00000618548 TAOK2Q9UL54 1235 aa25.17■■□□□ 1.62
PCSK6-217ENST00000618548 CHD1LQ86WJ1 897 aa25.17■■□□□ 1.62
PCSK6-217ENST00000618548 SPATA31E1Q6ZUB1 1445 aa25.16■■□□□ 1.62
PCSK6-217ENST00000618548 SNAPC4Q5SXM2 1469 aa25.15■■□□□ 1.62
PCSK6-217ENST00000618548 RALGAPBQ86X10 1494 aa25.15■■□□□ 1.62
PCSK6-217ENST00000618548 CCDC39Q9UFE4 941 aa25.15■■□□□ 1.62
PCSK6-217ENST00000618548 SPINK5Q9NQ38 1064 aaPredicted RBP25.15■■□□□ 1.62
PCSK6-217ENST00000618548 TMEM57Q8N5G2 664 aa25.15■■□□□ 1.62
PCSK6-217ENST00000618548 GOLGA6L6A8MZA4 724 aa25.14■■□□□ 1.62
PCSK6-217ENST00000618548 HMOX1P09601 288 aa25.14■■□□□ 1.62
PCSK6-217ENST00000618548 NAP1L2Q9ULW6 460 aaPredicted RBP25.14■■□□□ 1.62
PCSK6-217ENST00000618548 API5Q9BZZ5 524 aaKnown RBP25.14■■□□□ 1.61
PCSK6-217ENST00000618548 MINK1Q8N4C8 1332 aaPredicted RBP25.13■■□□□ 1.61
PCSK6-217ENST00000618548 UQCRHLA0A096LP55 91 aa25.13■■□□□ 1.61
PCSK6-217ENST00000618548 UQCRHP07919 91 aa25.13■■□□□ 1.61
PCSK6-217ENST00000618548 CABP2Q9NPB3 220 aa25.13■■□□□ 1.61
PCSK6-217ENST00000618548 ANO2Q9NQ90 1003 aa25.13■■□□□ 1.61
PCSK6-217ENST00000618548 TEX14Q8IWB6 1497 aa25.13■■□□□ 1.61
PCSK6-217ENST00000618548 LMOD3Q0VAK6 560 aa25.12■■□□□ 1.61
PCSK6-217ENST00000618548 RABEP1Q15276 862 aa25.12■■□□□ 1.61
PCSK6-217ENST00000618548 TNNQ9UQP3 1299 aa25.12■■□□□ 1.61
PCSK6-217ENST00000618548 SSFA2P28290 1259 aa25.12■■□□□ 1.61
PCSK6-217ENST00000618548 CUL7Q14999 1698 aa25.12■■□□□ 1.61
PCSK6-217ENST00000618548 THOC2Q8NI27 1593 aaKnown RBP25.12■■□□□ 1.61
PCSK6-217ENST00000618548 STK31Q9BXU1 1019 aa25.1■■□□□ 1.61
PCSK6-217ENST00000618548 SSH1Q8WYL5 1049 aa25.1■■□□□ 1.61
PCSK6-217ENST00000618548 MTERF4Q7Z6M4 381 aaKnown RBP25.1■■□□□ 1.61
PCSK6-217ENST00000618548 AFAP1Q8N556 730 aa25.1■■□□□ 1.61
PCSK6-217ENST00000618548 NEK4P51957 841 aa25.09■■□□□ 1.61
PCSK6-217ENST00000618548 GCC1Q96CN9 775 aa25.09■■□□□ 1.61
PCSK6-217ENST00000618548 CHMP3Q9Y3E7 222 aa25.09■■□□□ 1.61
PCSK6-217ENST00000618548 TESK2Q96S53 571 aa25.09■■□□□ 1.61
PCSK6-217ENST00000618548 NRDCO43847 1150 aa25.09■■□□□ 1.61
PCSK6-217ENST00000618548 PDCL3Q9H2J4 239 aa25.09■■□□□ 1.61
PCSK6-217ENST00000618548 A0A0U1RQG5 324 aaPredicted RBP25.08■■□□□ 1.61
PCSK6-217ENST00000618548 XPCQ01831 940 aaPredicted RBP25.08■■□□□ 1.6
PCSK6-217ENST00000618548 TCOF1Q13428 1488 aaKnown RBP25.07■■□□□ 1.6
PCSK6-217ENST00000618548 RLBP1P12271 317 aa25.06■■□□□ 1.6
PCSK6-217ENST00000618548 MBD3O95983 291 aa25.05■■□□□ 1.6
PCSK6-217ENST00000618548 GNAI1P63096 354 aa25.04■■□□□ 1.6
PCSK6-217ENST00000618548 CT47B1P0C2W7 299 aaPredicted RBP25.04■■□□□ 1.6
PCSK6-217ENST00000618548 TRIM27P14373 513 aa25.04■■□□□ 1.6
PCSK6-217ENST00000618548 IQGAP2Q13576 1575 aa25.04■■□□□ 1.6
PCSK6-217ENST00000618548 ZNF771Q7L3S4 317 aaPredicted RBP25.03■■□□□ 1.6
PCSK6-217ENST00000618548 CC2D2AQ9P2K1 1620 aa25.03■■□□□ 1.6
PCSK6-217ENST00000618548 VGFO15240 615 aaPredicted RBP25.02■■□□□ 1.6
PCSK6-217ENST00000618548 BCL11BQ9C0K0 894 aaPredicted RBP25.02■■□□□ 1.6
PCSK6-217ENST00000618548 SCAPERQ9BY12 1400 aa25.02■■□□□ 1.6
PCSK6-217ENST00000618548 PRKAR2BP31323 418 aa25.02■■□□□ 1.6
PCSK6-217ENST00000618548 SYCE3A1L190 88 aa25.01■■□□□ 1.59
PCSK6-217ENST00000618548 ATP6V1DQ9Y5K8 247 aa25.01■■□□□ 1.59
PCSK6-217ENST00000618548 TSPY26PQ9H489 355 aa25.01■■□□□ 1.59
PCSK6-217ENST00000618548 ZNF592Q92610 1267 aa25■■□□□ 1.59
PCSK6-217ENST00000618548 TMPOP42166 694 aaKnown RBP25■■□□□ 1.59
PCSK6-217ENST00000618548 ARHGEF11O15085 1522 aa25■■□□□ 1.59
PCSK6-217ENST00000618548 PLB1Q6P1J6 1458 aa24.99■■□□□ 1.59
PCSK6-217ENST00000618548 CWC22Q9HCG8 908 aaKnown RBP24.98■■□□□ 1.59
PCSK6-217ENST00000618548 PZPP20742 1482 aa24.98■■□□□ 1.59
PCSK6-217ENST00000618548 NSD3Q9BZ95 1437 aa24.97■■□□□ 1.59
PCSK6-217ENST00000618548 PRDM10Q9NQV6 1147 aa24.97■■□□□ 1.59
PCSK6-217ENST00000618548 DMRT2Q9Y5R5 561 aa24.96■■□□□ 1.59
PCSK6-217ENST00000618548 ARHGAP5Q13017 1502 aa24.96■■□□□ 1.59
PCSK6-217ENST00000618548 BAG4O95429 457 aaKnown RBP24.96■■□□□ 1.59
PCSK6-217ENST00000618548 TWISTNBQ3B726 338 aaPredicted RBP24.96■■□□□ 1.59
PCSK6-217ENST00000618548 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.95■■□□□ 1.59
PCSK6-217ENST00000618548 PRAG1Q86YV5 1406 aa24.94■■□□□ 1.58
PCSK6-217ENST00000618548 HMGN5P82970 282 aaKnown RBP24.94■■□□□ 1.58
PCSK6-217ENST00000618548 VPS37CA5D8V6 355 aaPredicted RBP24.94■■□□□ 1.58
PCSK6-217ENST00000618548 RBM42Q9BTD8 480 aaKnown RBP24.94■■□□□ 1.58
PCSK6-217ENST00000618548 GPATCH8Q9UKJ3 1502 aaKnown RBP24.93■■□□□ 1.58
PCSK6-217ENST00000618548 NECTIN2Q92692 538 aa24.93■■□□□ 1.58
PCSK6-217ENST00000618548 NUTM2FA1L443 756 aa24.92■■□□□ 1.58
PCSK6-217ENST00000618548 DIAPH3Q9NSV4 1193 aa24.92■■□□□ 1.58
PCSK6-217ENST00000618548 CCDC27Q2M243 656 aa24.92■■□□□ 1.58
PCSK6-217ENST00000618548 SMC3Q9UQE7 1217 aa24.92■■□□□ 1.58
PCSK6-217ENST00000618548 TBC1D9Q6ZT07 1266 aa24.92■■□□□ 1.58
PCSK6-217ENST00000618548 KIAA0586Q9BVV6 1533 aa24.91■■□□□ 1.58
PCSK6-217ENST00000618548 KLHL40Q2TBA0 621 aa24.91■■□□□ 1.58
PCSK6-217ENST00000618548 GPRASP1Q5JY77 1395 aa24.91■■□□□ 1.58
PCSK6-217ENST00000618548 THUMPD2Q9BTF0 503 aaKnown RBP24.91■■□□□ 1.58
PCSK6-217ENST00000618548 IFT57Q9NWB7 429 aa24.91■■□□□ 1.58
PCSK6-217ENST00000618548 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.89■■□□□ 1.58
PCSK6-217ENST00000618548 HTATSF1O43719 755 aaKnown RBP24.89■■□□□ 1.58
PCSK6-217ENST00000618548 MLECQ14165 292 aa24.89■■□□□ 1.58
PCSK6-217ENST00000618548 FIBPO43427 364 aa24.89■■□□□ 1.57
PCSK6-217ENST00000618548 RBM27Q9P2N5 1060 aaKnown RBP24.89■■□□□ 1.57
PCSK6-217ENST00000618548 SPC24Q8NBT2 197 aa24.89■■□□□ 1.57
PCSK6-217ENST00000618548 BMP2KLQ5H9B9 411 aa24.88■■□□□ 1.57
PCSK6-217ENST00000618548 COG3Q96JB2 828 aa24.88■■□□□ 1.57
PCSK6-217ENST00000618548 ERC2O15083 957 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms