RNA–Protein interactions for RNA: ENST00000617546.4

CUL4A-212, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 5,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-212ENST00000617546 CPLX2Q6PUV4 134 aaKnown RBP12.38□□□□□ -0.43
CUL4A-212ENST00000617546 CDR1P51861 262 aa12.38□□□□□ -0.43
CUL4A-212ENST00000617546 WDR33Q9C0J8 1336 aaKnown RBP12.38□□□□□ -0.43
CUL4A-212ENST00000617546 AEBP1Q8IUX7 1158 aa12.38□□□□□ -0.43
CUL4A-212ENST00000617546 KIF2AO00139 706 aaPredicted RBP12.38□□□□□ -0.43
CUL4A-212ENST00000617546 PRPF40AO75400 957 aaKnown RBP12.38□□□□□ -0.43
CUL4A-212ENST00000617546 RBM10P98175 930 aaKnown RBP12.38□□□□□ -0.43
CUL4A-212ENST00000617546 SUPT6HQ7KZ85 1726 aaKnown RBP12.38□□□□□ -0.43
CUL4A-212ENST00000617546 ERC2O15083 957 aa12.37□□□□□ -0.43
CUL4A-212ENST00000617546 PSMA5P28066 241 aa12.37□□□□□ -0.43
CUL4A-212ENST00000617546 RIPK4P57078 832 aa12.37□□□□□ -0.43
CUL4A-212ENST00000617546 DYNC1I1O14576 645 aa12.37□□□□□ -0.43
CUL4A-212ENST00000617546 ANO2Q9NQ90 1003 aa12.37□□□□□ -0.43
CUL4A-212ENST00000617546 IPO7O95373 1038 aaKnown RBP12.37□□□□□ -0.43
CUL4A-212ENST00000617546 CCDC192P0DO97 292 aa12.37□□□□□ -0.43
CUL4A-212ENST00000617546 VGFO15240 615 aaPredicted RBP12.37□□□□□ -0.43
CUL4A-212ENST00000617546 CCDC112Q8NEF3 446 aa12.37□□□□□ -0.43
CUL4A-212ENST00000617546 POLA1P09884 1462 aaPredicted RBP12.37□□□□□ -0.43
CUL4A-212ENST00000617546 MVPQ14764 893 aaKnown RBP12.36□□□□□ -0.43
CUL4A-212ENST00000617546 LEKR1Q6ZMV7 388 aa12.36□□□□□ -0.43
CUL4A-212ENST00000617546 FANCD2Q9BXW9 1451 aa12.36□□□□□ -0.43
CUL4A-212ENST00000617546 CCAR2Q8N163 923 aaKnown RBP12.36□□□□□ -0.43
CUL4A-212ENST00000617546 PLEKHH1Q9ULM0 1364 aa12.35□□□□□ -0.43
CUL4A-212ENST00000617546 SLFN5Q08AF3 891 aa12.35□□□□□ -0.43
CUL4A-212ENST00000617546 STK26Q9P289 416 aa12.35□□□□□ -0.43
CUL4A-212ENST00000617546 TRIM5Q9C035 493 aa12.34□□□□□ -0.43
CUL4A-212ENST00000617546 SAFB2Q14151 953 aaKnown RBP eCLIP12.34□□□□□ -0.43
CUL4A-212ENST00000617546 NAIPQ13075 1403 aa12.34□□□□□ -0.43
CUL4A-212ENST00000617546 HIP1O00291 1037 aa12.33□□□□□ -0.43
CUL4A-212ENST00000617546 KIF3BO15066 747 aa12.33□□□□□ -0.43
CUL4A-212ENST00000617546 HECW1Q76N89 1606 aa12.33□□□□□ -0.43
CUL4A-212ENST00000617546 USP8P40818 1118 aa12.33□□□□□ -0.44
CUL4A-212ENST00000617546 RNF214Q8ND24 703 aa12.33□□□□□ -0.44
CUL4A-212ENST00000617546 PRIMPOLQ96LW4 560 aa12.33□□□□□ -0.44
CUL4A-212ENST00000617546 ERBINQ96RT1 1412 aa12.33□□□□□ -0.44
CUL4A-212ENST00000617546 VPS37CA5D8V6 355 aaPredicted RBP12.33□□□□□ -0.44
CUL4A-212ENST00000617546 HS1BP3Q53T59 392 aa12.33□□□□□ -0.44
CUL4A-212ENST00000617546 GORABQ5T7V8 394 aa12.33□□□□□ -0.44
CUL4A-212ENST00000617546 RUFY1Q96T51 708 aa12.33□□□□□ -0.44
CUL4A-212ENST00000617546 NBPF8Q3BBV2 869 aa12.32□□□□□ -0.44
CUL4A-212ENST00000617546 TCP11L2Q8N4U5 519 aa12.32□□□□□ -0.44
CUL4A-212ENST00000617546 NKTRP30414 1462 aaKnown RBP12.32□□□□□ -0.44
CUL4A-212ENST00000617546 GAPVD1Q14C86 1478 aa12.32□□□□□ -0.44
CUL4A-212ENST00000617546 TRIM29Q14134 588 aa12.32□□□□□ -0.44
CUL4A-212ENST00000617546 COG3Q96JB2 828 aa12.32□□□□□ -0.44
CUL4A-212ENST00000617546 CALCOCO1Q9P1Z2 691 aa12.32□□□□□ -0.44
CUL4A-212ENST00000617546 CGNQ9P2M7 1197 aaKnown RBP12.31□□□□□ -0.44
CUL4A-212ENST00000617546 TRAK1Q9UPV9 953 aa12.31□□□□□ -0.44
CUL4A-212ENST00000617546 CCDC47Q96A33 483 aaKnown RBP12.31□□□□□ -0.44
CUL4A-212ENST00000617546 TAOK2Q9UL54 1235 aa12.31□□□□□ -0.44
CUL4A-212ENST00000617546 UVSSAQ2YD98 709 aa12.31□□□□□ -0.44
CUL4A-212ENST00000617546 OLFM4Q6UX06 510 aa12.31□□□□□ -0.44
CUL4A-212ENST00000617546 CNTROBQ8N137 903 aa12.31□□□□□ -0.44
CUL4A-212ENST00000617546 EIF3JO75822 258 aaKnown RBP12.31□□□□□ -0.44
CUL4A-212ENST00000617546 CHD1LQ86WJ1 897 aa12.31□□□□□ -0.44
CUL4A-212ENST00000617546 GNAI3P08754 354 aa12.31□□□□□ -0.44
CUL4A-212ENST00000617546 IFIT2P09913 472 aaKnown RBP12.31□□□□□ -0.44
CUL4A-212ENST00000617546 SRCIN1Q9C0H9 1055 aa12.3□□□□□ -0.44
CUL4A-212ENST00000617546 RDXP35241 583 aaKnown RBP12.3□□□□□ -0.44
CUL4A-212ENST00000617546 ANKRD1Q15327 319 aa12.3□□□□□ -0.44
CUL4A-212ENST00000617546 CCDC184Q52MB2 194 aa12.3□□□□□ -0.44
CUL4A-212ENST00000617546 LRPPRCP42704 1394 aaKnown RBP12.3□□□□□ -0.44
CUL4A-212ENST00000617546 ERLIN1O75477 346 aa12.3□□□□□ -0.44
CUL4A-212ENST00000617546 NEK4P51957 841 aa12.3□□□□□ -0.44
CUL4A-212ENST00000617546 FOXD4L6Q3SYB3 417 aaPredicted RBP12.3□□□□□ -0.44
CUL4A-212ENST00000617546 FOXD4L3Q6VB84 417 aaPredicted RBP12.3□□□□□ -0.44
CUL4A-212ENST00000617546 CFTRP13569 1480 aa12.3□□□□□ -0.44
CUL4A-212ENST00000617546 SYNE3Q6ZMZ3 975 aa12.29□□□□□ -0.44
CUL4A-212ENST00000617546 ZNF396Q96N95 335 aaPredicted RBP12.29□□□□□ -0.44
CUL4A-212ENST00000617546 GGT6Q6P531 493 aa12.29□□□□□ -0.44
CUL4A-212ENST00000617546 ATF7IPQ6VMQ6 1270 aa12.29□□□□□ -0.44
CUL4A-212ENST00000617546 ZSCAN31Q96LW9 406 aaPredicted RBP12.29□□□□□ -0.44
CUL4A-212ENST00000617546 DCTN1Q14203 1278 aa12.29□□□□□ -0.44
CUL4A-212ENST00000617546 ZMYND15Q9H091 742 aa12.29□□□□□ -0.44
CUL4A-212ENST00000617546 NCAPD3P42695 1498 aa12.28□□□□□ -0.44
CUL4A-212ENST00000617546 KINO60870 393 aaKnown RBP12.28□□□□□ -0.44
CUL4A-212ENST00000617546 DAPK1P53355 1430 aa12.28□□□□□ -0.44
CUL4A-212ENST00000617546 NEMFO60524 1076 aa12.28□□□□□ -0.44
CUL4A-212ENST00000617546 BCAR3O75815 825 aa12.28□□□□□ -0.44
CUL4A-212ENST00000617546 RASSF8Q8NHQ8 419 aa12.28□□□□□ -0.44
CUL4A-212ENST00000617546 CBFA2T2O43439 604 aa12.27□□□□□ -0.44
CUL4A-212ENST00000617546 APPP05067 770 aa12.27□□□□□ -0.45
CUL4A-212ENST00000617546 KRT85P78386 507 aa12.27□□□□□ -0.45
CUL4A-212ENST00000617546 KLHL40Q2TBA0 621 aa12.27□□□□□ -0.45
CUL4A-212ENST00000617546 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.27□□□□□ -0.45
CUL4A-212ENST00000617546 TBC1D2Q9BYX2 928 aa12.27□□□□□ -0.45
CUL4A-212ENST00000617546 GPRASP1Q5JY77 1395 aa12.27□□□□□ -0.45
CUL4A-212ENST00000617546 AKAP17AQ02040 695 aaKnown RBP12.26□□□□□ -0.45
CUL4A-212ENST00000617546 CPLX1O14810 134 aa12.26□□□□□ -0.45
CUL4A-212ENST00000617546 PIP4K2AP48426 406 aaPredicted RBP12.26□□□□□ -0.45
CUL4A-212ENST00000617546 TERF1P54274 439 aa12.26□□□□□ -0.45
CUL4A-212ENST00000617546 TBC1D32Q96NH3 1257 aa12.26□□□□□ -0.45
CUL4A-212ENST00000617546 ANKRD30BQ9BXX2 1392 aa12.26□□□□□ -0.45
CUL4A-212ENST00000617546 SMARCE1Q969G3 411 aa12.26□□□□□ -0.45
CUL4A-212ENST00000617546 GTPBP4Q9BZE4 634 aaKnown RBP12.26□□□□□ -0.45
CUL4A-212ENST00000617546 ABCC11Q96J66 1382 aa12.26□□□□□ -0.45
CUL4A-212ENST00000617546 JPH4Q96JJ6 628 aa12.26□□□□□ -0.45
CUL4A-212ENST00000617546 SENP3Q9H4L4 574 aaPredicted RBP12.26□□□□□ -0.45
CUL4A-212ENST00000617546 CCDC183Q5T5S1 534 aa12.25□□□□□ -0.45
CUL4A-212ENST00000617546 WWC1Q8IX03 1113 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms