RNA–Protein interactions for RNA: ENST00000616710.4

TNFRSF11A-205, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-205ENST00000616710 NUCB2P80303 420 aa17.18■□□□□ 0.34
TNFRSF11A-205ENST00000616710 NOB1Q9ULX3 412 aaKnown RBP17.18■□□□□ 0.34
TNFRSF11A-205ENST00000616710 CCDC144AA2RUR9 1427 aa17.17■□□□□ 0.34
TNFRSF11A-205ENST00000616710 PDS5BQ9NTI5 1447 aa17.17■□□□□ 0.34
TNFRSF11A-205ENST00000616710 NOL7Q9UMY1 257 aaKnown RBP17.17■□□□□ 0.34
TNFRSF11A-205ENST00000616710 ST18O60284 1047 aa17.17■□□□□ 0.34
TNFRSF11A-205ENST00000616710 CASC1Q6TDU7 716 aa17.17■□□□□ 0.34
TNFRSF11A-205ENST00000616710 CIZ1Q9ULV3 898 aaPredicted RBP17.17■□□□□ 0.34
TNFRSF11A-205ENST00000616710 U2AF2P26368 475 aaKnown RBP eCLIP17.16■□□□□ 0.34
TNFRSF11A-205ENST00000616710 KCNJ4P48050 445 aa17.16■□□□□ 0.34
TNFRSF11A-205ENST00000616710 TMEM57Q8N5G2 664 aa17.16■□□□□ 0.34
TNFRSF11A-205ENST00000616710 KIF16BQ96L93 1317 aa17.15■□□□□ 0.34
TNFRSF11A-205ENST00000616710 DENND4BO75064 1496 aaPredicted RBP17.15■□□□□ 0.34
TNFRSF11A-205ENST00000616710 ZGPATQ8N5A5 531 aaKnown RBP17.14■□□□□ 0.33
TNFRSF11A-205ENST00000616710 ANKRD50Q9ULJ7 1429 aa17.14■□□□□ 0.33
TNFRSF11A-205ENST00000616710 DAPK1P53355 1430 aa17.14■□□□□ 0.33
TNFRSF11A-205ENST00000616710 DTNBO60941 627 aa17.14■□□□□ 0.33
TNFRSF11A-205ENST00000616710 AEBP2Q6ZN18 517 aaPredicted RBP17.13■□□□□ 0.33
TNFRSF11A-205ENST00000616710 SYAP1Q96A49 352 aaPredicted RBP17.13■□□□□ 0.33
TNFRSF11A-205ENST00000616710 TSPY26PQ9H489 355 aa17.13■□□□□ 0.33
TNFRSF11A-205ENST00000616710 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.13■□□□□ 0.33
TNFRSF11A-205ENST00000616710 CHD1LQ86WJ1 897 aa17.13■□□□□ 0.33
TNFRSF11A-205ENST00000616710 IPO8O15397 1037 aaKnown RBP17.13■□□□□ 0.33
TNFRSF11A-205ENST00000616710 MTHFSP49914 203 aa17.13■□□□□ 0.33
TNFRSF11A-205ENST00000616710 RUNDC1Q96C34 613 aa17.12■□□□□ 0.33
TNFRSF11A-205ENST00000616710 CDK13Q14004 1512 aaKnown RBP17.12■□□□□ 0.33
TNFRSF11A-205ENST00000616710 PPP1R9BQ96SB3 815 aa17.12■□□□□ 0.33
TNFRSF11A-205ENST00000616710 IFT57Q9NWB7 429 aa17.12■□□□□ 0.33
TNFRSF11A-205ENST00000616710 TRIM27P14373 513 aa17.12■□□□□ 0.33
TNFRSF11A-205ENST00000616710 NEK4P51957 841 aa17.12■□□□□ 0.33
TNFRSF11A-205ENST00000616710 CCDC27Q2M243 656 aa17.12■□□□□ 0.33
TNFRSF11A-205ENST00000616710 TBC1D9Q6ZT07 1266 aa17.12■□□□□ 0.33
TNFRSF11A-205ENST00000616710 HMGN5P82970 282 aaKnown RBP17.11■□□□□ 0.33
TNFRSF11A-205ENST00000616710 TAOK2Q9UL54 1235 aa17.11■□□□□ 0.33
TNFRSF11A-205ENST00000616710 SMC5Q8IY18 1101 aa17.11■□□□□ 0.33
TNFRSF11A-205ENST00000616710 SSH1Q8WYL5 1049 aa17.11■□□□□ 0.33
TNFRSF11A-205ENST00000616710 ABCC5O15440 1437 aa17.1■□□□□ 0.33
TNFRSF11A-205ENST00000616710 PDIA4P13667 645 aaKnown RBP17.1■□□□□ 0.33
TNFRSF11A-205ENST00000616710 PAXIP1Q6ZW49 1069 aaPredicted RBP17.1■□□□□ 0.33
TNFRSF11A-205ENST00000616710 DMTNQ08495 405 aa17.09■□□□□ 0.33
TNFRSF11A-205ENST00000616710 NOLC1Q14978 699 aaKnown RBP eCLIP17.09■□□□□ 0.33
TNFRSF11A-205ENST00000616710 ERBINQ96RT1 1412 aa17.09■□□□□ 0.33
TNFRSF11A-205ENST00000616710 CERS3Q8IU89 383 aa17.09■□□□□ 0.33
TNFRSF11A-205ENST00000616710 ZBTB9Q96C00 473 aa17.09■□□□□ 0.33
TNFRSF11A-205ENST00000616710 TESK2Q96S53 571 aa17.09■□□□□ 0.33
TNFRSF11A-205ENST00000616710 TRAK1Q9UPV9 953 aa17.09■□□□□ 0.33
TNFRSF11A-205ENST00000616710 BCORL1Q5H9F3 1711 aa17.08■□□□□ 0.32
TNFRSF11A-205ENST00000616710 ATF7IPQ6VMQ6 1270 aa17.08■□□□□ 0.32
TNFRSF11A-205ENST00000616710 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.07■□□□□ 0.32
TNFRSF11A-205ENST00000616710 V9GYY5 206 aaPredicted RBP17.07■□□□□ 0.32
TNFRSF11A-205ENST00000616710 NUTM2DQ5VT03 806 aaPredicted RBP17.07■□□□□ 0.32
TNFRSF11A-205ENST00000616710 TRIM6-TRIM34B2RNG4 842 aa17.07■□□□□ 0.32
TNFRSF11A-205ENST00000616710 ATP2B3Q16720 1220 aa17.07■□□□□ 0.32
TNFRSF11A-205ENST00000616710 LARP6Q9BRS8 491 aaKnown RBP17.07■□□□□ 0.32
TNFRSF11A-205ENST00000616710 FIBPO43427 364 aa17.06■□□□□ 0.32
TNFRSF11A-205ENST00000616710 CDC45O75419 566 aa17.06■□□□□ 0.32
TNFRSF11A-205ENST00000616710 HCLS1P14317 486 aaPredicted RBP17.06■□□□□ 0.32
TNFRSF11A-205ENST00000616710 TMEM63CQ9P1W3 806 aa17.06■□□□□ 0.32
TNFRSF11A-205ENST00000616710 C16orf45Q96MC5 204 aaPredicted RBP17.06■□□□□ 0.32
TNFRSF11A-205ENST00000616710 EFCAB5A4FU69 1503 aa17.05■□□□□ 0.32
TNFRSF11A-205ENST00000616710 DIAPH3Q9NSV4 1193 aa17.05■□□□□ 0.32
TNFRSF11A-205ENST00000616710 SUPT6HQ7KZ85 1726 aaKnown RBP17.05■□□□□ 0.32
TNFRSF11A-205ENST00000616710 ADCY5O95622 1261 aa17.05■□□□□ 0.32
TNFRSF11A-205ENST00000616710 RILPL2Q969X0 211 aa17.05■□□□□ 0.32
TNFRSF11A-205ENST00000616710 SLC12A5Q9H2X9 1139 aa17.04■□□□□ 0.32
TNFRSF11A-205ENST00000616710 LRSAM1Q6UWE0 723 aa17.04■□□□□ 0.32
TNFRSF11A-205ENST00000616710 NSFL1CQ9UNZ2 370 aaKnown RBP17.04■□□□□ 0.32
TNFRSF11A-205ENST00000616710 ZSCAN20P17040 1043 aaPredicted RBP17.03■□□□□ 0.32
TNFRSF11A-205ENST00000616710 ZFP91Q96JP5 570 aaPredicted RBP17.03■□□□□ 0.32
TNFRSF11A-205ENST00000616710 ZNF500O60304 480 aaPredicted RBP17.03■□□□□ 0.32
TNFRSF11A-205ENST00000616710 PHF14O94880 888 aa17.03■□□□□ 0.32
TNFRSF11A-205ENST00000616710 UPF3BQ9BZI7 483 aaKnown RBP17.03■□□□□ 0.32
TNFRSF11A-205ENST00000616710 GOLGA6L4A6NEF3 574 aa17.03■□□□□ 0.32
TNFRSF11A-205ENST00000616710 RABEP1Q15276 862 aa17.03■□□□□ 0.32
TNFRSF11A-205ENST00000616710 FBXW7Q969H0 707 aa17.03■□□□□ 0.32
TNFRSF11A-205ENST00000616710 BCL2L12Q9HB09 334 aa17.03■□□□□ 0.32
TNFRSF11A-205ENST00000616710 ANO2Q9NQ90 1003 aa17.02■□□□□ 0.32
TNFRSF11A-205ENST00000616710 LMBRD1Q9NUN5 540 aa17.02■□□□□ 0.32
TNFRSF11A-205ENST00000616710 BIVM-ERCC5R4GMW8 1640 aa17.02■□□□□ 0.32
TNFRSF11A-205ENST00000616710 ZMYM4Q5VZL5 1548 aa17.02■□□□□ 0.32
TNFRSF11A-205ENST00000616710 EHBP1L1Q8N3D4 1523 aa17.02■□□□□ 0.31
TNFRSF11A-205ENST00000616710 LETM1O95202 739 aaPredicted RBP17.02■□□□□ 0.31
TNFRSF11A-205ENST00000616710 SNX21Q969T3 373 aa17.02■□□□□ 0.31
TNFRSF11A-205ENST00000616710 ZNF692Q9BU19 519 aaPredicted RBP17.02■□□□□ 0.31
TNFRSF11A-205ENST00000616710 BLMP54132 1417 aaPredicted RBP17.01■□□□□ 0.31
TNFRSF11A-205ENST00000616710 PLEKHH2Q8IVE3 1493 aa17.01■□□□□ 0.31
TNFRSF11A-205ENST00000616710 MYRIPQ8NFW9 859 aa17.01■□□□□ 0.31
TNFRSF11A-205ENST00000616710 STAC3Q96MF2 364 aa17.01■□□□□ 0.31
TNFRSF11A-205ENST00000616710 GTF2E1P29083 439 aaPredicted RBP17.01■□□□□ 0.31
TNFRSF11A-205ENST00000616710 SMARCA5O60264 1052 aaPredicted RBP17.01■□□□□ 0.31
TNFRSF11A-205ENST00000616710 SLC4A10Q6U841 1118 aa17.01■□□□□ 0.31
TNFRSF11A-205ENST00000616710 GPT2Q8TD30 523 aa17.01■□□□□ 0.31
TNFRSF11A-205ENST00000616710 MBD3O95983 291 aa17■□□□□ 0.31
TNFRSF11A-205ENST00000616710 C16orf71Q8IYS4 520 aaPredicted RBP17■□□□□ 0.31
TNFRSF11A-205ENST00000616710 THUMPD2Q9BTF0 503 aaKnown RBP17■□□□□ 0.31
TNFRSF11A-205ENST00000616710 GTPBP4Q9BZE4 634 aaKnown RBP17■□□□□ 0.31
TNFRSF11A-205ENST00000616710 GAPVD1Q14C86 1478 aa17■□□□□ 0.31
TNFRSF11A-205ENST00000616710 POLA1P09884 1462 aaPredicted RBP16.99■□□□□ 0.31
TNFRSF11A-205ENST00000616710 ZNF521Q96K83 1311 aa16.99■□□□□ 0.31
TNFRSF11A-205ENST00000616710 CFAP70Q5T0N1 1121 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms