RNA–Protein interactions for RNA: ENST00000616278.4

DDB2-211, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 2

Gene DDB2, Length 960 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-211ENST00000616278 SCAF1Q9H7N4 1312 aaKnown RBP16.25■□□□□ 0.19
DDB2-211ENST00000616278 POGKQ9P215 609 aa16.24■□□□□ 0.19
DDB2-211ENST00000616278 TRAK1Q9UPV9 953 aa16.24■□□□□ 0.19
DDB2-211ENST00000616278 ADGRB2O60241 1585 aa16.24■□□□□ 0.19
DDB2-211ENST00000616278 FMN2Q9NZ56 1722 aa16.23■□□□□ 0.19
DDB2-211ENST00000616278 WAPLQ7Z5K2 1190 aa16.23■□□□□ 0.19
DDB2-211ENST00000616278 PRAM1Q96QH2 718 aa16.23■□□□□ 0.19
DDB2-211ENST00000616278 MST1RQ04912 1400 aa16.22■□□□□ 0.19
DDB2-211ENST00000616278 ROCK2O75116 1388 aaKnown RBP16.22■□□□□ 0.19
DDB2-211ENST00000616278 NBPF1Q3BBV0 1214 aa16.21■□□□□ 0.19
DDB2-211ENST00000616278 GPRASP1Q5JY77 1395 aa16.21■□□□□ 0.19
DDB2-211ENST00000616278 PLEKHH1Q9ULM0 1364 aa16.21■□□□□ 0.19
DDB2-211ENST00000616278 RALGAPBQ86X10 1494 aa16.21■□□□□ 0.19
DDB2-211ENST00000616278 EIF3AQ14152 1382 aaKnown RBP16.19■□□□□ 0.18
DDB2-211ENST00000616278 NBPF8Q3BBV2 869 aa16.19■□□□□ 0.18
DDB2-211ENST00000616278 PHLPP1O60346 1717 aa16.19■□□□□ 0.18
DDB2-211ENST00000616278 QRICH2Q9H0J4 1663 aa16.18■□□□□ 0.18
DDB2-211ENST00000616278 C1orf167Q5SNV9 1468 aa16.18■□□□□ 0.18
DDB2-211ENST00000616278 NHSL1Q5SYE7 1610 aa16.18■□□□□ 0.18
DDB2-211ENST00000616278 AHDC1Q5TGY3 1603 aaPredicted RBP16.18■□□□□ 0.18
DDB2-211ENST00000616278 RGPD8O14715 1765 aaPredicted RBP16.16■□□□□ 0.18
DDB2-211ENST00000616278 KIF1AQ12756 1690 aa16.16■□□□□ 0.18
DDB2-211ENST00000616278 ITSN1Q15811 1721 aa16.16■□□□□ 0.18
DDB2-211ENST00000616278 BRINP3Q76B58 766 aa16.15■□□□□ 0.18
DDB2-211ENST00000616278 ANKARQ7Z5J8 1434 aa16.15■□□□□ 0.18
DDB2-211ENST00000616278 CENPJQ9HC77 1338 aaPredicted RBP16.15■□□□□ 0.18
DDB2-211ENST00000616278 HSPA1LP34931 641 aa16.14■□□□□ 0.17
DDB2-211ENST00000616278 SAFB2Q14151 953 aaKnown RBP eCLIP16.14■□□□□ 0.17
DDB2-211ENST00000616278 CARD11Q9BXL7 1154 aa16.14■□□□□ 0.17
DDB2-211ENST00000616278 TULP4Q9NRJ4 1543 aa16.13■□□□□ 0.17
DDB2-211ENST00000616278 WASLO00401 505 aaPredicted RBP16.12■□□□□ 0.17
DDB2-211ENST00000616278 MINK1Q8N4C8 1332 aaPredicted RBP16.12■□□□□ 0.17
DDB2-211ENST00000616278 COL16A1Q07092 1604 aaPredicted RBP16.12■□□□□ 0.17
DDB2-211ENST00000616278 USP32Q8NFA0 1604 aa16.12■□□□□ 0.17
DDB2-211ENST00000616278 SLC24A1O60721 1099 aa16.11■□□□□ 0.17
DDB2-211ENST00000616278 ESCO1Q5FWF5 840 aa16.1■□□□□ 0.17
DDB2-211ENST00000616278 SBNO2Q9Y2G9 1366 aa16.1■□□□□ 0.17
DDB2-211ENST00000616278 HIRIP3Q9BW71 556 aaPredicted RBP16.09■□□□□ 0.17
DDB2-211ENST00000616278 SHPRHQ149N8 1683 aa16.08■□□□□ 0.17
DDB2-211ENST00000616278 ORAI2Q96SN7 254 aa16.08■□□□□ 0.16
DDB2-211ENST00000616278 NPHP3Q7Z494 1330 aa16.08■□□□□ 0.16
DDB2-211ENST00000616278 TOPAZ1Q8N9V7 1692 aa16.07■□□□□ 0.16
DDB2-211ENST00000616278 EVC2Q86UK5 1308 aa16.06■□□□□ 0.16
DDB2-211ENST00000616278 NUTM2FA1L443 756 aa16.06■□□□□ 0.16
DDB2-211ENST00000616278 LRRC59Q96AG4 307 aaKnown RBP16.06■□□□□ 0.16
DDB2-211ENST00000616278 CDK19Q9BWU1 502 aa16.06■□□□□ 0.16
DDB2-211ENST00000616278 ATP7BP35670 1465 aa16.05■□□□□ 0.16
DDB2-211ENST00000616278 JCADQ9P266 1359 aa16.05■□□□□ 0.16
DDB2-211ENST00000616278 SOS2Q07890 1332 aaPredicted RBP16.05■□□□□ 0.16
DDB2-211ENST00000616278 PHF8Q9UPP1 1060 aa16.05■□□□□ 0.16
DDB2-211ENST00000616278 NUDT16Q96DE0 195 aaKnown RBP16.03■□□□□ 0.16
DDB2-211ENST00000616278 CCDC61Q9Y6R9 512 aa16.03■□□□□ 0.16
DDB2-211ENST00000616278 SRPK2P78362 688 aaKnown RBP16.02■□□□□ 0.16
DDB2-211ENST00000616278 PSME1Q06323 249 aa16.02■□□□□ 0.16
DDB2-211ENST00000616278 PXDNQ92626 1479 aa16.02■□□□□ 0.15
DDB2-211ENST00000616278 USP47Q96K76 1375 aa16.01■□□□□ 0.15
DDB2-211ENST00000616278 SPATA31A6Q5VVP1 1343 aa16.01■□□□□ 0.15
DDB2-211ENST00000616278 PRR36Q9H6K5 1346 aa16.01■□□□□ 0.15
DDB2-211ENST00000616278 FOXO3O43524 673 aa16.01■□□□□ 0.15
DDB2-211ENST00000616278 PUS7Q96PZ0 661 aaKnown RBP16■□□□□ 0.15
DDB2-211ENST00000616278 COL22A1Q8NFW1 1626 aaPredicted RBP16■□□□□ 0.15
DDB2-211ENST00000616278 ATAD2Q6PL18 1390 aa15.99■□□□□ 0.15
DDB2-211ENST00000616278 ST20-MTHFSA0A0A6YYL1 179 aa15.98■□□□□ 0.15
DDB2-211ENST00000616278 PLEKHG3A1L390 1219 aa15.98■□□□□ 0.15
DDB2-211ENST00000616278 TRPM3Q9HCF6 1732 aaPredicted RBP15.98■□□□□ 0.15
DDB2-211ENST00000616278 POLR3AO14802 1390 aaPredicted RBP15.98■□□□□ 0.15
DDB2-211ENST00000616278 PPIP5K1Q6PFW1 1433 aa15.97■□□□□ 0.15
DDB2-211ENST00000616278 KRT28Q7Z3Y7 464 aa15.97■□□□□ 0.15
DDB2-211ENST00000616278 NGDNQ8NEJ9 315 aaKnown RBP15.97■□□□□ 0.15
DDB2-211ENST00000616278 PMFBP1Q8TBY8 1022 aa15.97■□□□□ 0.15
DDB2-211ENST00000616278 DDX17Q92841 729 aaKnown RBP15.97■□□□□ 0.15
DDB2-211ENST00000616278 CABP2Q9NPB3 220 aa15.97■□□□□ 0.15
DDB2-211ENST00000616278 SBNO1A3KN83 1393 aa15.97■□□□□ 0.15
DDB2-211ENST00000616278 MED1Q15648 1581 aaPredicted RBP15.96■□□□□ 0.15
DDB2-211ENST00000616278 BRD4O60885 1362 aaPredicted RBP15.96■□□□□ 0.15
DDB2-211ENST00000616278 AKAP12Q02952 1782 aa15.95■□□□□ 0.14
DDB2-211ENST00000616278 TESK2Q96S53 571 aa15.95■□□□□ 0.14
DDB2-211ENST00000616278 PNPLA6Q8IY17 1366 aa15.95■□□□□ 0.14
DDB2-211ENST00000616278 ALS2Q96Q42 1657 aa15.95■□□□□ 0.14
DDB2-211ENST00000616278 SPATA31A3Q5VYP0 1347 aa15.94■□□□□ 0.14
DDB2-211ENST00000616278 TNS3Q68CZ2 1445 aa15.94■□□□□ 0.14
DDB2-211ENST00000616278 EIF4G2P78344 907 aaKnown RBP eCLIP15.94■□□□□ 0.14
DDB2-211ENST00000616278 TMF1P82094 1093 aa15.94■□□□□ 0.14
DDB2-211ENST00000616278 CDCA8Q53HL2 280 aa15.94■□□□□ 0.14
DDB2-211ENST00000616278 MARF1Q9Y4F3 1742 aaKnown RBP15.94■□□□□ 0.14
DDB2-211ENST00000616278 ACEP12821 1306 aa15.94■□□□□ 0.14
DDB2-211ENST00000616278 ARHGEF10O15013 1369 aa15.93■□□□□ 0.14
DDB2-211ENST00000616278 ZNF692Q9BU19 519 aaPredicted RBP15.93■□□□□ 0.14
DDB2-211ENST00000616278 NINLQ9Y2I6 1382 aa15.92■□□□□ 0.14
DDB2-211ENST00000616278 XPCQ01831 940 aaPredicted RBP15.91■□□□□ 0.14
DDB2-211ENST00000616278 CABP1Q9NZU7 370 aa15.91■□□□□ 0.14
DDB2-211ENST00000616278 MON2Q7Z3U7 1717 aa15.91■□□□□ 0.14
DDB2-211ENST00000616278 ABCA3Q99758 1704 aa15.88■□□□□ 0.13
DDB2-211ENST00000616278 LRP6O75581 1613 aa15.87■□□□□ 0.13
DDB2-211ENST00000616278 USP6P35125 1406 aa15.87■□□□□ 0.13
DDB2-211ENST00000616278 CPSF1Q10570 1443 aaKnown RBP15.87■□□□□ 0.13
DDB2-211ENST00000616278 CRYBG1Q9Y4K1 1723 aa15.87■□□□□ 0.13
DDB2-211ENST00000616278 NRKQ7Z2Y5 1582 aa15.87■□□□□ 0.13
DDB2-211ENST00000616278 PAK3O75914 559 aaPredicted RBP15.86■□□□□ 0.13
DDB2-211ENST00000616278 MEX3CQ5U5Q3 659 aaKnown RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms