RNA–Protein interactions for RNA: ENST00000616236.1

RFC3-203, Transcript of replication factor C subunit 3, humanhuman

TSL 3

Gene RFC3, Length 612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-203ENST00000616236 NBPF26B4DH59 902 aa8.14□□□□□ -1.11
RFC3-203ENST00000616236 SOX11P35716 441 aa8.14□□□□□ -1.11
RFC3-203ENST00000616236 HELBQ8NG08 1087 aaPredicted RBP8.14□□□□□ -1.11
RFC3-203ENST00000616236 SLC39A7Q92504 469 aa8.14□□□□□ -1.11
RFC3-203ENST00000616236 GNEQ9Y223 722 aaKnown RBP8.14□□□□□ -1.11
RFC3-203ENST00000616236 GCGRP47871 477 aa8.13□□□□□ -1.11
RFC3-203ENST00000616236 SEMA3FQ13275 785 aa8.13□□□□□ -1.11
RFC3-203ENST00000616236 TBC1D9Q6ZT07 1266 aa8.13□□□□□ -1.11
RFC3-203ENST00000616236 HLA-CQ95604 372 aa8.13□□□□□ -1.11
RFC3-203ENST00000616236 UNCXA6NJT0 531 aa8.12□□□□□ -1.11
RFC3-203ENST00000616236 GABBR2O75899 941 aa8.12□□□□□ -1.11
RFC3-203ENST00000616236 MTMR2Q13614 643 aa8.12□□□□□ -1.11
RFC3-203ENST00000616236 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.12□□□□□ -1.11
RFC3-203ENST00000616236 CFAP99D6REC4 459 aa8.11□□□□□ -1.11
RFC3-203ENST00000616236 C7P10643 843 aa8.11□□□□□ -1.11
RFC3-203ENST00000616236 ARSIQ5FYB1 569 aa8.11□□□□□ -1.11
RFC3-203ENST00000616236 SMAPO00193 183 aa8.1□□□□□ -1.11
RFC3-203ENST00000616236 B4GALNT3Q6L9W6 998 aa8.1□□□□□ -1.11
RFC3-203ENST00000616236 PACS2Q86VP3 889 aa8.1□□□□□ -1.11
RFC3-203ENST00000616236 TRIM6-TRIM34B2RNG4 842 aa8.09□□□□□ -1.11
RFC3-203ENST00000616236 PPP1R3GB7ZBB8 358 aa8.09□□□□□ -1.11
RFC3-203ENST00000616236 ATP9BO43861 1147 aa8.09□□□□□ -1.11
RFC3-203ENST00000616236 RSPH4AQ5TD94 716 aa8.09□□□□□ -1.11
RFC3-203ENST00000616236 DCBLD2Q96PD2 775 aa8.09□□□□□ -1.11
RFC3-203ENST00000616236 USP35Q9P2H5 1018 aa8.09□□□□□ -1.11
RFC3-203ENST00000616236 NR6A1Q15406 480 aa8.08□□□□□ -1.12
RFC3-203ENST00000616236 KANK4Q5T7N3 995 aaPredicted RBP8.08□□□□□ -1.12
RFC3-203ENST00000616236 BCL2L12Q9HB09 334 aa8.08□□□□□ -1.12
RFC3-203ENST00000616236 METRNQ9UJH8 293 aa8.08□□□□□ -1.12
RFC3-203ENST00000616236 RBM47A0AV96 593 aaKnown RBP8.07□□□□□ -1.12
RFC3-203ENST00000616236 C6orf229H3BNL8 230 aa8.07□□□□□ -1.12
RFC3-203ENST00000616236 SLF2Q8IX21 1173 aa8.07□□□□□ -1.12
RFC3-203ENST00000616236 CCER1Q8TC90 406 aaPredicted RBP8.07□□□□□ -1.12
RFC3-203ENST00000616236 SLC10A3P09131 477 aa8.06□□□□□ -1.12
RFC3-203ENST00000616236 EIF4G2P78344 907 aaKnown RBP eCLIP8.06□□□□□ -1.12
RFC3-203ENST00000616236 ELOAQ14241 798 aaKnown RBP8.06□□□□□ -1.12
RFC3-203ENST00000616236 PPP4R3BQ5MIZ7 849 aa8.06□□□□□ -1.12
RFC3-203ENST00000616236 TMEM164Q5U3C3 297 aa8.06□□□□□ -1.12
RFC3-203ENST00000616236 TXNDC2Q86VQ3 553 aa8.06□□□□□ -1.12
RFC3-203ENST00000616236 PNMA1Q8ND90 353 aa8.06□□□□□ -1.12
RFC3-203ENST00000616236 STK32AQ8WU08 396 aa8.06□□□□□ -1.12
RFC3-203ENST00000616236 ZMIZ1Q9ULJ6 1067 aa8.06□□□□□ -1.12
RFC3-203ENST00000616236 LHX6Q9UPM6 363 aa8.06□□□□□ -1.12
RFC3-203ENST00000616236 PTPREP23469 700 aa8.05□□□□□ -1.12
RFC3-203ENST00000616236 PHLDB3Q6NSJ2 640 aa8.04□□□□□ -1.12
RFC3-203ENST00000616236 PIK3CDO00329 1044 aa8.03□□□□□ -1.12
RFC3-203ENST00000616236 PER1O15534 1290 aaPredicted RBP8.03□□□□□ -1.12
RFC3-203ENST00000616236 PROX2Q3B8N5 592 aa8.03□□□□□ -1.12
RFC3-203ENST00000616236 GPR153Q6NV75 609 aa8.03□□□□□ -1.12
RFC3-203ENST00000616236 SYMPKQ92797 1274 aaKnown RBP8.03□□□□□ -1.12
RFC3-203ENST00000616236 IGSF5Q9NSI5 407 aa8.03□□□□□ -1.12
RFC3-203ENST00000616236 NOVA2Q9UNW9 492 aaKnown RBP8.03□□□□□ -1.12
RFC3-203ENST00000616236 DOK7Q18PE1 504 aa8.02□□□□□ -1.13
RFC3-203ENST00000616236 SWT1Q5T5J6 900 aaKnown RBP8.02□□□□□ -1.13
RFC3-203ENST00000616236 ARID4AP29374 1257 aaPredicted RBP8.01□□□□□ -1.13
RFC3-203ENST00000616236 NR1H3Q13133 447 aa8.01□□□□□ -1.13
RFC3-203ENST00000616236 DNAJC14Q6Y2X3 702 aaPredicted RBP8.01□□□□□ -1.13
RFC3-203ENST00000616236 KIAA1522Q9P206 1035 aaPredicted RBP8.01□□□□□ -1.13
RFC3-203ENST00000616236 USP17L3A6NCW0 530 aa8□□□□□ -1.13
RFC3-203ENST00000616236 USP17L4A6NCW7 530 aa8□□□□□ -1.13
RFC3-203ENST00000616236 HOXB3P14651 431 aaPredicted RBP8□□□□□ -1.13
RFC3-203ENST00000616236 FUT2Q10981 343 aa8□□□□□ -1.13
RFC3-203ENST00000616236 GRIPAP1Q4V328 841 aa8□□□□□ -1.13
RFC3-203ENST00000616236 USP17L2Q6R6M4 530 aa8□□□□□ -1.13
RFC3-203ENST00000616236 USP17L1Q7RTZ2 530 aa8□□□□□ -1.13
RFC3-203ENST00000616236 MRRFQ96E11 262 aaKnown RBP8□□□□□ -1.13
RFC3-203ENST00000616236 PSDA5PKW4 1024 aaPredicted RBP7.99□□□□□ -1.13
RFC3-203ENST00000616236 RIMBP2O15034 1052 aa7.99□□□□□ -1.13
RFC3-203ENST00000616236 ERCC3P19447 782 aa7.99□□□□□ -1.13
RFC3-203ENST00000616236 SSFA2P28290 1259 aa7.99□□□□□ -1.13
RFC3-203ENST00000616236 NFATC2IPQ8NCF5 419 aa7.99□□□□□ -1.13
RFC3-203ENST00000616236 ZSWIM6Q9HCJ5 1215 aa7.99□□□□□ -1.13
RFC3-203ENST00000616236 KIAA1468Q9P260 1216 aa7.99□□□□□ -1.13
RFC3-203ENST00000616236 SLAIN2Q9P270 581 aa7.99□□□□□ -1.13
RFC3-203ENST00000616236 FBXO45P0C2W1 286 aa7.98□□□□□ -1.13
RFC3-203ENST00000616236 SKIP12755 728 aa7.98□□□□□ -1.13
RFC3-203ENST00000616236 USP17L5A8MUK1 530 aa7.97□□□□□ -1.13
RFC3-203ENST00000616236 NOM1Q5C9Z4 860 aaKnown RBP7.97□□□□□ -1.13
RFC3-203ENST00000616236 SOWAHDA6NJG2 315 aa7.96□□□□□ -1.14
RFC3-203ENST00000616236 FAM196BA6NMK8 535 aa7.96□□□□□ -1.14
RFC3-203ENST00000616236 USP17L15C9J2P7 530 aa7.96□□□□□ -1.14
RFC3-203ENST00000616236 USP17L10C9JJH3 530 aa7.96□□□□□ -1.14
RFC3-203ENST00000616236 USP17L13C9JLJ4 530 aa7.96□□□□□ -1.14
RFC3-203ENST00000616236 USP17L12C9JPN9 530 aa7.96□□□□□ -1.14
RFC3-203ENST00000616236 USP17L11C9JVI0 530 aa7.96□□□□□ -1.14
RFC3-203ENST00000616236 USP17L21D6R901 530 aa7.96□□□□□ -1.14
RFC3-203ENST00000616236 USP17L18D6R9N7 530 aa7.96□□□□□ -1.14
RFC3-203ENST00000616236 USP17L22D6RA61 530 aa7.96□□□□□ -1.14
RFC3-203ENST00000616236 USP17L17D6RBQ6 530 aa7.96□□□□□ -1.14
RFC3-203ENST00000616236 USP17L19D6RCP7 530 aa7.96□□□□□ -1.14
RFC3-203ENST00000616236 USP17L20D6RJB6 530 aa7.96□□□□□ -1.14
RFC3-203ENST00000616236 POTEIP0CG38 1075 aa7.96□□□□□ -1.14
RFC3-203ENST00000616236 ZNF16P17020 682 aaPredicted RBP7.96□□□□□ -1.14
RFC3-203ENST00000616236 USP17L24Q0WX57 530 aa7.96□□□□□ -1.14
RFC3-203ENST00000616236 CRTC2Q53ET0 693 aaPredicted RBP7.96□□□□□ -1.14
RFC3-203ENST00000616236 PLEKHM2Q8IWE5 1019 aa7.96□□□□□ -1.14
RFC3-203ENST00000616236 DEPDC4Q8N2C3 294 aa7.96□□□□□ -1.14
RFC3-203ENST00000616236 ZBBXA8MT70 800 aa7.95□□□□□ -1.14
RFC3-203ENST00000616236 ATP6V1AP38606 617 aa7.95□□□□□ -1.14
RFC3-203ENST00000616236 RETREG3Q86VR2 466 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms