RNA–Protein interactions for RNA: ENST00000613795.4

CLCN3-211, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,874 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-211ENST00000613795 API5Q9BZZ5 524 aaKnown RBP8.29□□□□□ -1.08
CLCN3-211ENST00000613795 SMG6Q86US8 1419 aaKnown RBP8.29□□□□□ -1.08
CLCN3-211ENST00000613795 SYNJ2O15056 1496 aa8.29□□□□□ -1.08
CLCN3-211ENST00000613795 LRRC9Q6ZRR7 1453 aa8.29□□□□□ -1.08
CLCN3-211ENST00000613795 DNAJC2Q99543 621 aaKnown RBP8.29□□□□□ -1.08
CLCN3-211ENST00000613795 IPO7O95373 1038 aaKnown RBP8.28□□□□□ -1.08
CLCN3-211ENST00000613795 ANKRD45Q5TZF3 282 aa8.28□□□□□ -1.08
CLCN3-211ENST00000613795 NAT10Q9H0A0 1025 aaKnown RBP8.28□□□□□ -1.08
CLCN3-211ENST00000613795 HFM1A2PYH4 1435 aa8.28□□□□□ -1.08
CLCN3-211ENST00000613795 EIF3JO75822 258 aaKnown RBP8.28□□□□□ -1.08
CLCN3-211ENST00000613795 HSP90AB4PQ58FF6 505 aa8.28□□□□□ -1.08
CLCN3-211ENST00000613795 INTS3Q68E01 1043 aaKnown RBP8.28□□□□□ -1.08
CLCN3-211ENST00000613795 AMOTL1Q8IY63 956 aa8.28□□□□□ -1.08
CLCN3-211ENST00000613795 HECW1Q76N89 1606 aa8.28□□□□□ -1.08
CLCN3-211ENST00000613795 G3V3G9 751 aa8.28□□□□□ -1.08
CLCN3-211ENST00000613795 DDX58O95786 925 aaKnown RBP8.28□□□□□ -1.08
CLCN3-211ENST00000613795 DCAF8Q5TAQ9 597 aa8.28□□□□□ -1.08
CLCN3-211ENST00000613795 GTPBP4Q9BZE4 634 aaKnown RBP8.28□□□□□ -1.08
CLCN3-211ENST00000613795 PANK3Q9H999 370 aa8.28□□□□□ -1.08
CLCN3-211ENST00000613795 CWC22Q9HCG8 908 aaKnown RBP8.28□□□□□ -1.08
CLCN3-211ENST00000613795 MRC2Q9UBG0 1479 aa8.27□□□□□ -1.08
CLCN3-211ENST00000613795 NEXNQ0ZGT2 675 aa8.27□□□□□ -1.09
CLCN3-211ENST00000613795 COG6Q9Y2V7 657 aa8.27□□□□□ -1.09
CLCN3-211ENST00000613795 FAM184AQ8NB25 1140 aa8.27□□□□□ -1.09
CLCN3-211ENST00000613795 PRDM2Q13029 1718 aa8.27□□□□□ -1.09
CLCN3-211ENST00000613795 KIAA0754O94854 1291 aa8.27□□□□□ -1.09
CLCN3-211ENST00000613795 CGNQ9P2M7 1197 aaKnown RBP8.27□□□□□ -1.09
CLCN3-211ENST00000613795 MCM2P49736 904 aa8.26□□□□□ -1.09
CLCN3-211ENST00000613795 WASHC2AQ641Q2 1341 aa8.26□□□□□ -1.09
CLCN3-211ENST00000613795 PATL2C9JE40 543 aaKnown RBP8.26□□□□□ -1.09
CLCN3-211ENST00000613795 RNF214Q8ND24 703 aa8.26□□□□□ -1.09
CLCN3-211ENST00000613795 GIMAP7Q8NHV1 300 aa8.26□□□□□ -1.09
CLCN3-211ENST00000613795 HOOK1Q9UJC3 728 aaKnown RBP8.26□□□□□ -1.09
CLCN3-211ENST00000613795 DIAPH1O60610 1272 aaKnown RBP8.26□□□□□ -1.09
CLCN3-211ENST00000613795 CHMP3Q9Y3E7 222 aa8.26□□□□□ -1.09
CLCN3-211ENST00000613795 BRD4O60885 1362 aaPredicted RBP8.26□□□□□ -1.09
CLCN3-211ENST00000613795 IRX3P78415 501 aaPredicted RBP8.26□□□□□ -1.09
CLCN3-211ENST00000613795 ANKRD20A12PQ8NF67 263 aa8.26□□□□□ -1.09
CLCN3-211ENST00000613795 BICD2Q8TD16 824 aa8.26□□□□□ -1.09
CLCN3-211ENST00000613795 FAM107BQ9H098 131 aa8.26□□□□□ -1.09
CLCN3-211ENST00000613795 PRDM10Q9NQV6 1147 aa8.26□□□□□ -1.09
CLCN3-211ENST00000613795 ERLIN1O75477 346 aa8.25□□□□□ -1.09
CLCN3-211ENST00000613795 HMGB2P26583 209 aaKnown RBP8.25□□□□□ -1.09
CLCN3-211ENST00000613795 CBX1P83916 185 aa8.25□□□□□ -1.09
CLCN3-211ENST00000613795 TIGD1Q96MW7 591 aa8.25□□□□□ -1.09
CLCN3-211ENST00000613795 TRAK1Q9UPV9 953 aa8.25□□□□□ -1.09
CLCN3-211ENST00000613795 CLSTN1O94985 981 aa8.25□□□□□ -1.09
CLCN3-211ENST00000613795 CPLX2Q6PUV4 134 aaKnown RBP8.25□□□□□ -1.09
CLCN3-211ENST00000613795 NOL10Q9BSC4 688 aaKnown RBP8.25□□□□□ -1.09
CLCN3-211ENST00000613795 CCDC7Q96M83 1385 aa8.25□□□□□ -1.09
CLCN3-211ENST00000613795 NINLQ9Y2I6 1382 aa8.25□□□□□ -1.09
CLCN3-211ENST00000613795 ST20-MTHFSA0A0A6YYL1 179 aa8.25□□□□□ -1.09
CLCN3-211ENST00000613795 RABEP1Q15276 862 aa8.25□□□□□ -1.09
CLCN3-211ENST00000613795 HSP90AB3PQ58FF7 597 aa8.25□□□□□ -1.09
CLCN3-211ENST00000613795 SYNE3Q6ZMZ3 975 aa8.25□□□□□ -1.09
CLCN3-211ENST00000613795 TTC5Q8N0Z6 440 aa8.25□□□□□ -1.09
CLCN3-211ENST00000613795 RUNDC1Q96C34 613 aa8.25□□□□□ -1.09
CLCN3-211ENST00000613795 KIF2AO00139 706 aaPredicted RBP8.25□□□□□ -1.09
CLCN3-211ENST00000613795 CDC45O75419 566 aa8.25□□□□□ -1.09
CLCN3-211ENST00000613795 KIF7Q2M1P5 1343 aa8.25□□□□□ -1.09
CLCN3-211ENST00000613795 CFTRP13569 1480 aa8.25□□□□□ -1.09
CLCN3-211ENST00000613795 SMAP1Q8IYB5 467 aaPredicted RBP8.24□□□□□ -1.09
CLCN3-211ENST00000613795 CCDC146Q8IYE0 955 aa8.24□□□□□ -1.09
CLCN3-211ENST00000613795 TRIM5Q9C035 493 aa8.24□□□□□ -1.09
CLCN3-211ENST00000613795 ZHX1Q9UKY1 873 aaPredicted RBP8.24□□□□□ -1.09
CLCN3-211ENST00000613795 ARHGAP5Q13017 1502 aa8.24□□□□□ -1.09
CLCN3-211ENST00000613795 SMC3Q9UQE7 1217 aa8.24□□□□□ -1.09
CLCN3-211ENST00000613795 NCOA2Q15596 1464 aa8.24□□□□□ -1.09
CLCN3-211ENST00000613795 GNAI1P63096 354 aa8.24□□□□□ -1.09
CLCN3-211ENST00000613795 TEFQ10587 303 aa8.24□□□□□ -1.09
CLCN3-211ENST00000613795 PRIMPOLQ96LW4 560 aa8.24□□□□□ -1.09
CLCN3-211ENST00000613795 ANKRD50Q9ULJ7 1429 aa8.24□□□□□ -1.09
CLCN3-211ENST00000613795 NBPF1Q3BBV0 1214 aa8.24□□□□□ -1.09
CLCN3-211ENST00000613795 DZIP1LQ8IYY4 767 aaKnown RBP8.24□□□□□ -1.09
CLCN3-211ENST00000613795 SLC4A10Q6U841 1118 aa8.24□□□□□ -1.09
CLCN3-211ENST00000613795 CCDC73Q6ZRK6 1079 aa8.24□□□□□ -1.09
CLCN3-211ENST00000613795 ERICH4A6NGS2 130 aa8.23□□□□□ -1.09
CLCN3-211ENST00000613795 CCDC47Q96A33 483 aaKnown RBP8.23□□□□□ -1.09
CLCN3-211ENST00000613795 PRPF40AO75400 957 aaKnown RBP8.23□□□□□ -1.09
CLCN3-211ENST00000613795 AKAP17AQ02040 695 aaKnown RBP8.23□□□□□ -1.09
CLCN3-211ENST00000613795 AEBP1Q8IUX7 1158 aa8.23□□□□□ -1.09
CLCN3-211ENST00000613795 CEP89Q96ST8 783 aa8.23□□□□□ -1.09
CLCN3-211ENST00000613795 FOXD4L6Q3SYB3 417 aaPredicted RBP8.23□□□□□ -1.09
CLCN3-211ENST00000613795 FOXD4L3Q6VB84 417 aaPredicted RBP8.23□□□□□ -1.09
CLCN3-211ENST00000613795 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.23□□□□□ -1.09
CLCN3-211ENST00000613795 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.23□□□□□ -1.09
CLCN3-211ENST00000613795 TOP2BQ02880 1626 aa8.23□□□□□ -1.09
CLCN3-211ENST00000613795 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.22□□□□□ -1.09
CLCN3-211ENST00000613795 GOLGA6L7A0A1B0GV03 622 aa8.22□□□□□ -1.09
CLCN3-211ENST00000613795 GTF2E1P29083 439 aaPredicted RBP8.22□□□□□ -1.09
CLCN3-211ENST00000613795 EVA1CP58658 441 aa8.22□□□□□ -1.09
CLCN3-211ENST00000613795 ZKSCAN1P17029 563 aaPredicted RBP8.22□□□□□ -1.09
CLCN3-211ENST00000613795 CCDC192P0DO97 292 aa8.22□□□□□ -1.09
CLCN3-211ENST00000613795 RBM25P49756 843 aaKnown RBP8.22□□□□□ -1.09
CLCN3-211ENST00000613795 RASSF8Q8NHQ8 419 aa8.22□□□□□ -1.09
CLCN3-211ENST00000613795 ZRSR2Q15696 482 aaKnown RBP8.22□□□□□ -1.09
CLCN3-211ENST00000613795 ZNF330Q9Y3S2 320 aaPredicted RBP8.22□□□□□ -1.09
CLCN3-211ENST00000613795 CTR9Q6PD62 1173 aa8.21□□□□□ -1.09
CLCN3-211ENST00000613795 K7ELQ4 463 aaPredicted RBP8.21□□□□□ -1.1
CLCN3-211ENST00000613795 ERC2O15083 957 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms