RNA–Protein interactions for RNA: ENST00000613214.4

TNXB-209, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-209ENST00000613214 TSHZ2Q9NRE2 1034 aa18.71■□□□□ 0.59
TNXB-209ENST00000613214 CAGE1Q8TC20 777 aa18.71■□□□□ 0.59
TNXB-209ENST00000613214 DDX54Q8TDD1 881 aaKnown RBP18.71■□□□□ 0.59
TNXB-209ENST00000613214 ATP6V1DQ9Y5K8 247 aa18.71■□□□□ 0.59
TNXB-209ENST00000613214 IFT57Q9NWB7 429 aa18.71■□□□□ 0.59
TNXB-209ENST00000613214 SF3B2Q13435 895 aaKnown RBP18.7■□□□□ 0.58
TNXB-209ENST00000613214 SAFBQ15424 915 aaKnown RBP eCLIP18.7■□□□□ 0.58
TNXB-209ENST00000613214 ESCO1Q5FWF5 840 aa18.7■□□□□ 0.58
TNXB-209ENST00000613214 PDE4AP27815 886 aa18.7■□□□□ 0.58
TNXB-209ENST00000613214 FMNL2Q96PY5 1086 aa18.7■□□□□ 0.58
TNXB-209ENST00000613214 PPM1FP49593 454 aaPredicted RBP18.7■□□□□ 0.58
TNXB-209ENST00000613214 FAM69CQ0P6D2 419 aa18.69■□□□□ 0.58
TNXB-209ENST00000613214 WWC2Q6AWC2 1192 aa18.69■□□□□ 0.58
TNXB-209ENST00000613214 HOOK1Q9UJC3 728 aaKnown RBP18.69■□□□□ 0.58
TNXB-209ENST00000613214 GPS2Q13227 327 aa18.69■□□□□ 0.58
TNXB-209ENST00000613214 C1orf115Q9H7X2 142 aa18.69■□□□□ 0.58
TNXB-209ENST00000613214 TMEM132EQ6IEE7 984 aa18.69■□□□□ 0.58
TNXB-209ENST00000613214 BICDL1Q6ZP65 573 aa18.69■□□□□ 0.58
TNXB-209ENST00000613214 SIL1Q9H173 461 aa18.68■□□□□ 0.58
TNXB-209ENST00000613214 MYBBP1AQ9BQG0 1328 aaKnown RBP18.68■□□□□ 0.58
TNXB-209ENST00000613214 KIF15Q9NS87 1388 aa18.68■□□□□ 0.58
TNXB-209ENST00000613214 PLCD4Q9BRC7 762 aa18.67■□□□□ 0.58
TNXB-209ENST00000613214 RNF20Q5VTR2 975 aa18.67■□□□□ 0.58
TNXB-209ENST00000613214 CCDC144AA2RUR9 1427 aa18.67■□□□□ 0.58
TNXB-209ENST00000613214 KRT18P05783 430 aaKnown RBP18.66■□□□□ 0.58
TNXB-209ENST00000613214 STK3Q13188 491 aa18.66■□□□□ 0.58
TNXB-209ENST00000613214 RNF214Q8ND24 703 aa18.66■□□□□ 0.58
TNXB-209ENST00000613214 CENPQQ7L2Z9 268 aaPredicted RBP18.66■□□□□ 0.58
TNXB-209ENST00000613214 ANKRD62A6NC57 917 aa18.66■□□□□ 0.58
TNXB-209ENST00000613214 PANK1Q8TE04 598 aa18.66■□□□□ 0.58
TNXB-209ENST00000613214 CDK5RAP3Q96JB5 506 aa18.66■□□□□ 0.58
TNXB-209ENST00000613214 FSD1Q9BTV5 496 aa18.66■□□□□ 0.58
TNXB-209ENST00000613214 VGFO15240 615 aaPredicted RBP18.65■□□□□ 0.58
TNXB-209ENST00000613214 KIF6Q6ZMV9 814 aa18.65■□□□□ 0.58
TNXB-209ENST00000613214 MPNDQ8N594 471 aa18.65■□□□□ 0.58
TNXB-209ENST00000613214 CNNM1Q9NRU3 951 aa18.65■□□□□ 0.58
TNXB-209ENST00000613214 MYL6BP14649 208 aa18.64■□□□□ 0.58
TNXB-209ENST00000613214 ABTB2Q8N961 1025 aa18.64■□□□□ 0.58
TNXB-209ENST00000613214 RRP1P56182 461 aaKnown RBP18.64■□□□□ 0.57
TNXB-209ENST00000613214 E9PSI1 815 aa18.64■□□□□ 0.57
TNXB-209ENST00000613214 CCDC85AQ96PX6 553 aaPredicted RBP18.64■□□□□ 0.57
TNXB-209ENST00000613214 NLRP6P59044 892 aa18.64■□□□□ 0.57
TNXB-209ENST00000613214 BRMS1Q9HCU9 246 aa18.64■□□□□ 0.57
TNXB-209ENST00000613214 DZIP1LQ8IYY4 767 aaKnown RBP18.63■□□□□ 0.57
TNXB-209ENST00000613214 MATR3P43243 847 aaKnown RBP eCLIP18.63■□□□□ 0.57
TNXB-209ENST00000613214 REC8O95072 547 aa18.63■□□□□ 0.57
TNXB-209ENST00000613214 XPCQ01831 940 aaPredicted RBP18.63■□□□□ 0.57
TNXB-209ENST00000613214 PAXIP1Q6ZW49 1069 aaPredicted RBP18.62■□□□□ 0.57
TNXB-209ENST00000613214 JPH4Q96JJ6 628 aa18.62■□□□□ 0.57
TNXB-209ENST00000613214 OLFM4Q6UX06 510 aa18.62■□□□□ 0.57
TNXB-209ENST00000613214 TTC39AQ5SRH9 613 aa18.62■□□□□ 0.57
TNXB-209ENST00000613214 CCDC73Q6ZRK6 1079 aa18.62■□□□□ 0.57
TNXB-209ENST00000613214 SMC2O95347 1197 aa18.62■□□□□ 0.57
TNXB-209ENST00000613214 UBTFL1P0CB47 393 aaPredicted RBP18.62■□□□□ 0.57
TNXB-209ENST00000613214 CCDC97Q96F63 343 aaPredicted RBP18.62■□□□□ 0.57
TNXB-209ENST00000613214 WDR70Q9NW82 654 aa18.61■□□□□ 0.57
TNXB-209ENST00000613214 MNS1Q8NEH6 495 aa18.61■□□□□ 0.57
TNXB-209ENST00000613214 ZSCAN29Q8IWY8 852 aaPredicted RBP18.61■□□□□ 0.57
TNXB-209ENST00000613214 MAP7D2Q96T17 732 aa18.61■□□□□ 0.57
TNXB-209ENST00000613214 NEFHP12036 1026 aa18.6■□□□□ 0.57
TNXB-209ENST00000613214 AK7Q96M32 723 aa18.6■□□□□ 0.57
TNXB-209ENST00000613214 FMN1Q68DA7 1419 aa18.59■□□□□ 0.57
TNXB-209ENST00000613214 SDF4Q9BRK5 362 aa18.58■□□□□ 0.57
TNXB-209ENST00000613214 SEPT11Q9NVA2 429 aaKnown RBP18.58■□□□□ 0.57
TNXB-209ENST00000613214 DDX19BQ9UMR2 479 aa18.58■□□□□ 0.57
TNXB-209ENST00000613214 ZNF219Q9P2Y4 722 aaPredicted RBP18.58■□□□□ 0.56
TNXB-209ENST00000613214 PRDM2Q13029 1718 aa18.58■□□□□ 0.56
TNXB-209ENST00000613214 INTS3Q68E01 1043 aaKnown RBP18.58■□□□□ 0.56
TNXB-209ENST00000613214 ERC2O15083 957 aa18.57■□□□□ 0.56
TNXB-209ENST00000613214 NUP133Q8WUM0 1156 aa18.57■□□□□ 0.56
TNXB-209ENST00000613214 SYCP1Q15431 976 aa18.57■□□□□ 0.56
TNXB-209ENST00000613214 SPC24Q8NBT2 197 aa18.57■□□□□ 0.56
TNXB-209ENST00000613214 PDCL3Q9H2J4 239 aa18.57■□□□□ 0.56
TNXB-209ENST00000613214 TBC1D2BQ9UPU7 963 aa18.56■□□□□ 0.56
TNXB-209ENST00000613214 SURF6O75683 361 aaKnown RBP18.56■□□□□ 0.56
TNXB-209ENST00000613214 GSE1Q14687 1217 aa18.56■□□□□ 0.56
TNXB-209ENST00000613214 TANGO6Q9C0B7 1094 aa18.55■□□□□ 0.56
TNXB-209ENST00000613214 MPHOSPH10O00566 681 aaKnown RBP18.55■□□□□ 0.56
TNXB-209ENST00000613214 CALRP27797 417 aaKnown RBP18.55■□□□□ 0.56
TNXB-209ENST00000613214 XBP1P17861 261 aa18.54■□□□□ 0.56
TNXB-209ENST00000613214 TEX35Q5T0J7 233 aa18.54■□□□□ 0.56
TNXB-209ENST00000613214 TOM1L2Q6ZVM7 507 aa18.54■□□□□ 0.56
TNXB-209ENST00000613214 FAM177A1Q8N128 213 aaPredicted RBP18.54■□□□□ 0.56
TNXB-209ENST00000613214 SSBP05455 408 aaKnown RBP eCLIP18.53■□□□□ 0.56
TNXB-209ENST00000613214 SKOR2Q2VWA4 1001 aaPredicted RBP18.53■□□□□ 0.56
TNXB-209ENST00000613214 API5Q9BZZ5 524 aaKnown RBP18.53■□□□□ 0.56
TNXB-209ENST00000613214 PROSER2Q86WR7 435 aaPredicted RBP18.53■□□□□ 0.56
TNXB-209ENST00000613214 MAGEC2Q9UBF1 373 aaPredicted RBP18.53■□□□□ 0.56
TNXB-209ENST00000613214 ECM2O94769 699 aaPredicted RBP18.52■□□□□ 0.56
TNXB-209ENST00000613214 CNTROBQ8N137 903 aa18.52■□□□□ 0.56
TNXB-209ENST00000613214 USP5P45974 858 aa18.52■□□□□ 0.55
TNXB-209ENST00000613214 CCDC173Q0VFZ6 552 aa18.52■□□□□ 0.55
TNXB-209ENST00000613214 USP47Q96K76 1375 aa18.52■□□□□ 0.55
TNXB-209ENST00000613214 PDE3BQ13370 1112 aa18.52■□□□□ 0.55
TNXB-209ENST00000613214 FKBP4Q02790 459 aaKnown RBP eCLIP18.51■□□□□ 0.55
TNXB-209ENST00000613214 CCDC18Q5T9S5 1454 aa18.51■□□□□ 0.55
TNXB-209ENST00000613214 CABP4P57796 275 aa18.51■□□□□ 0.55
TNXB-209ENST00000613214 VPS8Q8N3P4 1428 aa18.5■□□□□ 0.55
TNXB-209ENST00000613214 PDS5BQ9NTI5 1447 aa18.5■□□□□ 0.55
TNXB-209ENST00000613214 SART3Q15020 963 aaKnown RBP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms