RNA–Protein interactions for RNA: ENST00000612311.4

TMCO1-208, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 1 (best) BASIC

Gene TMCO1, Length 4,468 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-208ENST00000612311 PDZRN3Q9UPQ7 1066 aa10.59□□□□□ -0.71
TMCO1-208ENST00000612311 GNL2Q13823 731 aaKnown RBP10.58□□□□□ -0.72
TMCO1-208ENST00000612311 FOXD4L5Q5VV16 416 aaPredicted RBP10.58□□□□□ -0.72
TMCO1-208ENST00000612311 NUTM2GQ5VZR2 741 aa10.58□□□□□ -0.72
TMCO1-208ENST00000612311 FOXD4L4Q8WXT5 416 aaPredicted RBP10.58□□□□□ -0.72
TMCO1-208ENST00000612311 ATAD2Q6PL18 1390 aa10.58□□□□□ -0.72
TMCO1-208ENST00000612311 SLFN5Q08AF3 891 aa10.58□□□□□ -0.72
TMCO1-208ENST00000612311 DRC7Q8IY82 874 aa10.58□□□□□ -0.72
TMCO1-208ENST00000612311 BACH2Q9BYV9 841 aa10.58□□□□□ -0.72
TMCO1-208ENST00000612311 DDX49Q9Y6V7 483 aaKnown RBP10.58□□□□□ -0.72
TMCO1-208ENST00000612311 NSD3Q9BZ95 1437 aa10.57□□□□□ -0.72
TMCO1-208ENST00000612311 CT47B1P0C2W7 299 aaPredicted RBP10.57□□□□□ -0.72
TMCO1-208ENST00000612311 TWISTNBQ3B726 338 aaPredicted RBP10.57□□□□□ -0.72
TMCO1-208ENST00000612311 CHAF1AQ13111 956 aaPredicted RBP10.57□□□□□ -0.72
TMCO1-208ENST00000612311 ZNF692Q9BU19 519 aaPredicted RBP10.57□□□□□ -0.72
TMCO1-208ENST00000612311 ADGRF5Q8IZF2 1346 aa10.57□□□□□ -0.72
TMCO1-208ENST00000612311 HSP90B1P14625 803 aaKnown RBP10.57□□□□□ -0.72
TMCO1-208ENST00000612311 WWC1Q8IX03 1113 aa10.57□□□□□ -0.72
TMCO1-208ENST00000612311 DIAPH3Q9NSV4 1193 aa10.57□□□□□ -0.72
TMCO1-208ENST00000612311 NUP153P49790 1475 aaKnown RBP10.57□□□□□ -0.72
TMCO1-208ENST00000612311 TTC5Q8N0Z6 440 aa10.56□□□□□ -0.72
TMCO1-208ENST00000612311 CD109Q6YHK3 1445 aa10.56□□□□□ -0.72
TMCO1-208ENST00000612311 ADGRL1O94910 1474 aa10.56□□□□□ -0.72
TMCO1-208ENST00000612311 CSPP1Q1MSJ5 1256 aa10.56□□□□□ -0.72
TMCO1-208ENST00000612311 INTS3Q68E01 1043 aaKnown RBP10.56□□□□□ -0.72
TMCO1-208ENST00000612311 ATP10BO94823 1461 aa10.56□□□□□ -0.72
TMCO1-208ENST00000612311 RTEL1-TNFRSF6BF6WH68 1400 aa10.56□□□□□ -0.72
TMCO1-208ENST00000612311 DDX58O95786 925 aaKnown RBP10.56□□□□□ -0.72
TMCO1-208ENST00000612311 KIAA2012Q0VF49 1180 aa10.56□□□□□ -0.72
TMCO1-208ENST00000612311 SULT6B1Q6IMI4 303 aa10.56□□□□□ -0.72
TMCO1-208ENST00000612311 GAS2L2Q8NHY3 880 aa10.56□□□□□ -0.72
TMCO1-208ENST00000612311 ANO2Q9NQ90 1003 aa10.56□□□□□ -0.72
TMCO1-208ENST00000612311 NOB1Q9ULX3 412 aaKnown RBP10.56□□□□□ -0.72
TMCO1-208ENST00000612311 NFKBIBQ15653 356 aa10.55□□□□□ -0.72
TMCO1-208ENST00000612311 SKOR2Q2VWA4 1001 aaPredicted RBP10.55□□□□□ -0.72
TMCO1-208ENST00000612311 RUFY2Q8WXA3 655 aa10.55□□□□□ -0.72
TMCO1-208ENST00000612311 ATF7IPQ6VMQ6 1270 aa10.55□□□□□ -0.72
TMCO1-208ENST00000612311 NINLQ9Y2I6 1382 aa10.55□□□□□ -0.72
TMCO1-208ENST00000612311 ABTB2Q8N961 1025 aa10.55□□□□□ -0.72
TMCO1-208ENST00000612311 CCDC9Q9Y3X0 531 aaKnown RBP10.55□□□□□ -0.72
TMCO1-208ENST00000612311 RAPGEF4Q8WZA2 1011 aa10.54□□□□□ -0.72
TMCO1-208ENST00000612311 IFIT2P09913 472 aaKnown RBP10.54□□□□□ -0.72
TMCO1-208ENST00000612311 CDC45O75419 566 aa10.54□□□□□ -0.72
TMCO1-208ENST00000612311 MVPQ14764 893 aaKnown RBP10.54□□□□□ -0.72
TMCO1-208ENST00000612311 CCDC61Q9Y6R9 512 aa10.54□□□□□ -0.72
TMCO1-208ENST00000612311 FCHSD2O94868 740 aa10.53□□□□□ -0.72
TMCO1-208ENST00000612311 TMPOP42166 694 aaKnown RBP10.53□□□□□ -0.72
TMCO1-208ENST00000612311 SLC26A8Q96RN1 970 aa10.53□□□□□ -0.72
TMCO1-208ENST00000612311 HSP90AB4PQ58FF6 505 aa10.53□□□□□ -0.72
TMCO1-208ENST00000612311 KIF3AQ9Y496 699 aa10.53□□□□□ -0.72
TMCO1-208ENST00000612311 RAPGEF6Q8TEU7 1601 aa10.53□□□□□ -0.72
TMCO1-208ENST00000612311 UBTFL1P0CB47 393 aaPredicted RBP10.53□□□□□ -0.72
TMCO1-208ENST00000612311 IDI1Q13907 227 aa10.53□□□□□ -0.72
TMCO1-208ENST00000612311 FOXD4L6Q3SYB3 417 aaPredicted RBP10.53□□□□□ -0.72
TMCO1-208ENST00000612311 FOXD4L3Q6VB84 417 aaPredicted RBP10.53□□□□□ -0.72
TMCO1-208ENST00000612311 THEMISQ8N1K5 641 aaPredicted RBP10.53□□□□□ -0.72
TMCO1-208ENST00000612311 PHF14O94880 888 aa10.52□□□□□ -0.72
TMCO1-208ENST00000612311 GNAI3P08754 354 aa10.52□□□□□ -0.72
TMCO1-208ENST00000612311 ZKSCAN1P17029 563 aaPredicted RBP10.52□□□□□ -0.72
TMCO1-208ENST00000612311 C1orf115Q9H7X2 142 aa10.52□□□□□ -0.73
TMCO1-208ENST00000612311 ATP6V1DQ9Y5K8 247 aa10.52□□□□□ -0.73
TMCO1-208ENST00000612311 EVA1CP58658 441 aa10.52□□□□□ -0.73
TMCO1-208ENST00000612311 G3BP1Q13283 466 aaKnown RBP eCLIP10.52□□□□□ -0.73
TMCO1-208ENST00000612311 GCC1Q96CN9 775 aa10.52□□□□□ -0.73
TMCO1-208ENST00000612311 TCOF1Q13428 1488 aaKnown RBP10.52□□□□□ -0.73
TMCO1-208ENST00000612311 SCAF11Q99590 1463 aaKnown RBP10.52□□□□□ -0.73
TMCO1-208ENST00000612311 CCDC30Q5VVM6 783 aa10.52□□□□□ -0.73
TMCO1-208ENST00000612311 NLRP2Q9NX02 1062 aa10.52□□□□□ -0.73
TMCO1-208ENST00000612311 DISP3Q9P2K9 1392 aa10.51□□□□□ -0.73
TMCO1-208ENST00000612311 ZNF428Q96B54 188 aa10.51□□□□□ -0.73
TMCO1-208ENST00000612311 GPRASP1Q5JY77 1395 aa10.51□□□□□ -0.73
TMCO1-208ENST00000612311 DHX29Q7Z478 1369 aaKnown RBP10.51□□□□□ -0.73
TMCO1-208ENST00000612311 RRS1Q15050 365 aaKnown RBP10.5□□□□□ -0.73
TMCO1-208ENST00000612311 C20orf194Q5TEA3 1177 aa10.5□□□□□ -0.73
TMCO1-208ENST00000612311 FANCAO15360 1455 aa10.5□□□□□ -0.73
TMCO1-208ENST00000612311 ATF3P18847 181 aa10.5□□□□□ -0.73
TMCO1-208ENST00000612311 NUCB2P80303 420 aa10.5□□□□□ -0.73
TMCO1-208ENST00000612311 WAPLQ7Z5K2 1190 aa10.5□□□□□ -0.73
TMCO1-208ENST00000612311 NUDT16Q96DE0 195 aaKnown RBP10.5□□□□□ -0.73
TMCO1-208ENST00000612311 SLC4A2P04920 1241 aa10.5□□□□□ -0.73
TMCO1-208ENST00000612311 GTF2E1P29083 439 aaPredicted RBP10.5□□□□□ -0.73
TMCO1-208ENST00000612311 NFE2L2Q16236 605 aa10.5□□□□□ -0.73
TMCO1-208ENST00000612311 ESCO1Q5FWF5 840 aa10.49□□□□□ -0.73
TMCO1-208ENST00000612311 AIMP1Q12904 312 aaKnown RBP10.49□□□□□ -0.73
TMCO1-208ENST00000612311 TOMM22Q9NS69 142 aa10.49□□□□□ -0.73
TMCO1-208ENST00000612311 CTTNBP2Q8WZ74 1663 aa10.49□□□□□ -0.73
TMCO1-208ENST00000612311 ERC2O15083 957 aa10.49□□□□□ -0.73
TMCO1-208ENST00000612311 SURF6O75683 361 aaKnown RBP10.49□□□□□ -0.73
TMCO1-208ENST00000612311 DUSP27Q5VZP5 1158 aa10.49□□□□□ -0.73
TMCO1-208ENST00000612311 RIC3Q7Z5B4 369 aa10.49□□□□□ -0.73
TMCO1-208ENST00000612311 FAM184AQ8NB25 1140 aa10.49□□□□□ -0.73
TMCO1-208ENST00000612311 C14orf93Q9H972 538 aaKnown RBP10.49□□□□□ -0.73
TMCO1-208ENST00000612311 RARSP54136 660 aaKnown RBP10.48□□□□□ -0.73
TMCO1-208ENST00000612311 ISY1Q9ULR0 285 aaKnown RBP10.48□□□□□ -0.73
TMCO1-208ENST00000612311 RALGAPBQ86X10 1494 aa10.48□□□□□ -0.73
TMCO1-208ENST00000612311 PLCH2O75038 1416 aa10.48□□□□□ -0.73
TMCO1-208ENST00000612311 NOS1P29475 1434 aa10.48□□□□□ -0.73
TMCO1-208ENST00000612311 H3BQV1 296 aa10.48□□□□□ -0.73
TMCO1-208ENST00000612311 SF3A1Q15459 793 aaKnown RBP10.48□□□□□ -0.73
TMCO1-208ENST00000612311 PLEKHO1Q53GL0 409 aaPredicted RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms