RNA–Protein interactions for RNA: ENST00000611723.1

CLTCL1-207, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-207ENST00000611723 CENPJQ9HC77 1338 aaPredicted RBP22.4■■□□□ 1.18
CLTCL1-207ENST00000611723 CHD2O14647 1828 aaKnown RBP22.4■■□□□ 1.18
CLTCL1-207ENST00000611723 SBNO2Q9Y2G9 1366 aa22.38■■□□□ 1.17
CLTCL1-207ENST00000611723 ARHGEF28Q8N1W1 1705 aaKnown RBP22.38■■□□□ 1.17
CLTCL1-207ENST00000611723 PRAM1Q96QH2 718 aa22.37■■□□□ 1.17
CLTCL1-207ENST00000611723 PTCH1Q13635 1447 aa22.37■■□□□ 1.17
CLTCL1-207ENST00000611723 XRN1Q8IZH2 1706 aaKnown RBP22.37■■□□□ 1.17
CLTCL1-207ENST00000611723 POGKQ9P215 609 aa22.36■■□□□ 1.17
CLTCL1-207ENST00000611723 RGS17Q9UGC6 210 aaPredicted RBP22.36■■□□□ 1.17
CLTCL1-207ENST00000611723 ROBO2Q9HCK4 1378 aa22.36■■□□□ 1.17
CLTCL1-207ENST00000611723 WAPLQ7Z5K2 1190 aa22.35■■□□□ 1.17
CLTCL1-207ENST00000611723 NWD1Q149M9 1564 aa22.33■■□□□ 1.17
CLTCL1-207ENST00000611723 XIRP1Q702N8 1843 aaKnown RBP22.32■■□□□ 1.16
CLTCL1-207ENST00000611723 PLEKHH1Q9ULM0 1364 aa22.32■■□□□ 1.16
CLTCL1-207ENST00000611723 C11orf95C9JLR9 678 aaPredicted RBP22.31■■□□□ 1.16
CLTCL1-207ENST00000611723 TMF1P82094 1093 aa22.31■■□□□ 1.16
CLTCL1-207ENST00000611723 QRICH2Q9H0J4 1663 aa22.28■■□□□ 1.16
CLTCL1-207ENST00000611723 SAFB2Q14151 953 aaKnown RBP eCLIP22.28■■□□□ 1.161e-12■■■□□ 15
CLTCL1-207ENST00000611723 PUS7Q96PZ0 661 aaKnown RBP22.28■■□□□ 1.16
CLTCL1-207ENST00000611723 NKTRP30414 1462 aaKnown RBP22.28■■□□□ 1.16
CLTCL1-207ENST00000611723 CDCA8Q53HL2 280 aa22.26■■□□□ 1.15
CLTCL1-207ENST00000611723 WASHC2AQ641Q2 1341 aa22.26■■□□□ 1.15
CLTCL1-207ENST00000611723 KIF7Q2M1P5 1343 aa22.25■■□□□ 1.15
CLTCL1-207ENST00000611723 EVC2Q86UK5 1308 aa22.25■■□□□ 1.15
CLTCL1-207ENST00000611723 MINK1Q8N4C8 1332 aaPredicted RBP22.25■■□□□ 1.15
CLTCL1-207ENST00000611723 CCDC7Q96M83 1385 aa22.25■■□□□ 1.15
CLTCL1-207ENST00000611723 PROSER2Q86WR7 435 aaPredicted RBP22.24■■□□□ 1.15
CLTCL1-207ENST00000611723 NCOA3Q9Y6Q9 1424 aa22.23■■□□□ 1.15
CLTCL1-207ENST00000611723 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.22■■□□□ 1.15
CLTCL1-207ENST00000611723 WASLO00401 505 aaPredicted RBP22.21■■□□□ 1.15
CLTCL1-207ENST00000611723 POTEAQ6S8J7 498 aa22.2■■□□□ 1.14
CLTCL1-207ENST00000611723 TULP4Q9NRJ4 1543 aa22.2■■□□□ 1.14
CLTCL1-207ENST00000611723 CDK19Q9BWU1 502 aa22.19■■□□□ 1.14
CLTCL1-207ENST00000611723 ADGRB2O60241 1585 aa22.19■■□□□ 1.14
CLTCL1-207ENST00000611723 RBM33Q96EV2 1170 aaKnown RBP22.17■■□□□ 1.14
CLTCL1-207ENST00000611723 ADGRL3Q9HAR2 1447 aa22.16■■□□□ 1.14
CLTCL1-207ENST00000611723 TMEM94Q12767 1356 aa22.16■■□□□ 1.14
CLTCL1-207ENST00000611723 C19orf44Q9H6X5 657 aa22.14■■□□□ 1.13
CLTCL1-207ENST00000611723 CABP2Q9NPB3 220 aa22.14■■□□□ 1.13
CLTCL1-207ENST00000611723 SRPK2P78362 688 aaKnown RBP22.13■■□□□ 1.13
CLTCL1-207ENST00000611723 ROBO1Q9Y6N7 1651 aa22.13■■□□□ 1.13
CLTCL1-207ENST00000611723 ATAD2Q6PL18 1390 aa22.12■■□□□ 1.13
CLTCL1-207ENST00000611723 POLR3GLQ9BT43 218 aa22.11■■□□□ 1.13
CLTCL1-207ENST00000611723 DDX10Q13206 875 aaKnown RBP22.1■■□□□ 1.13
CLTCL1-207ENST00000611723 CDC42BPGQ6DT37 1551 aa22.1■■□□□ 1.13
CLTCL1-207ENST00000611723 C14orf37Q86TY3 774 aa22.1■■□□□ 1.13
CLTCL1-207ENST00000611723 NALCNQ8IZF0 1738 aa22.09■■□□□ 1.13
CLTCL1-207ENST00000611723 NUDT16Q96DE0 195 aaKnown RBP22.09■■□□□ 1.13
CLTCL1-207ENST00000611723 NINLQ9Y2I6 1382 aa22.09■■□□□ 1.13
CLTCL1-207ENST00000611723 CCDC61Q9Y6R9 512 aa22.08■■□□□ 1.13
CLTCL1-207ENST00000611723 DCCP43146 1447 aa22.07■■□□□ 1.12
CLTCL1-207ENST00000611723 PRR36Q9H6K5 1346 aa22.06■■□□□ 1.12
CLTCL1-207ENST00000611723 ANKARQ7Z5J8 1434 aa22.06■■□□□ 1.12
CLTCL1-207ENST00000611723 MSH6P52701 1360 aa22.05■■□□□ 1.12
CLTCL1-207ENST00000611723 SLC12A5Q9H2X9 1139 aa22.05■■□□□ 1.12
CLTCL1-207ENST00000611723 ATP7BP35670 1465 aa22.04■■□□□ 1.12
CLTCL1-207ENST00000611723 FMN2Q9NZ56 1722 aa22.04■■□□□ 1.12
CLTCL1-207ENST00000611723 CADPS2Q86UW7 1296 aa22.04■■□□□ 1.12
CLTCL1-207ENST00000611723 PLEKHG3A1L390 1219 aa22.03■■□□□ 1.12
CLTCL1-207ENST00000611723 ATF3P18847 181 aa22.03■■□□□ 1.12
CLTCL1-207ENST00000611723 TMC1Q8TDI8 760 aa22.03■■□□□ 1.12
CLTCL1-207ENST00000611723 CABP1Q9NZU7 370 aa22.03■■□□□ 1.12
CLTCL1-207ENST00000611723 PANK3Q9H999 370 aa22.02■■□□□ 1.12
CLTCL1-207ENST00000611723 MYOM1P52179 1685 aa22.01■■□□□ 1.11
CLTCL1-207ENST00000611723 USP32Q8NFA0 1604 aa22■■□□□ 1.11
CLTCL1-207ENST00000611723 PHLPP1O60346 1717 aa22■■□□□ 1.11
CLTCL1-207ENST00000611723 PPIP5K1Q6PFW1 1433 aa21.99■■□□□ 1.11
CLTCL1-207ENST00000611723 NUTM2FA1L443 756 aa21.99■■□□□ 1.11
CLTCL1-207ENST00000611723 PER1O15534 1290 aaPredicted RBP21.99■■□□□ 1.11
CLTCL1-207ENST00000611723 ANKRD36BQ8N2N9 1353 aa21.98■■□□□ 1.11
CLTCL1-207ENST00000611723 DIEXFQ68CQ4 756 aaKnown RBP21.97■■□□□ 1.11
CLTCL1-207ENST00000611723 TERF2IPQ9NYB0 399 aa21.97■■□□□ 1.11
CLTCL1-207ENST00000611723 TOPAZ1Q8N9V7 1692 aa21.97■■□□□ 1.11
CLTCL1-207ENST00000611723 MST1RQ04912 1400 aa21.97■■□□□ 1.11
CLTCL1-207ENST00000611723 C1orf167Q5SNV9 1468 aa21.96■■□□□ 1.11
CLTCL1-207ENST00000611723 ZNF692Q9BU19 519 aaPredicted RBP21.96■■□□□ 1.11
CLTCL1-207ENST00000611723 CPSF1Q10570 1443 aaKnown RBP21.96■■□□□ 1.11
CLTCL1-207ENST00000611723 CD163L1Q9NR16 1453 aa21.96■■□□□ 1.11
CLTCL1-207ENST00000611723 CARD14Q9BXL6 1004 aa21.95■■□□□ 1.1
CLTCL1-207ENST00000611723 HDGFL2Q7Z4V5 671 aaPredicted RBP21.94■■□□□ 1.1
CLTCL1-207ENST00000611723 ITSN1Q15811 1721 aa21.94■■□□□ 1.1
CLTCL1-207ENST00000611723 RGPD8O14715 1765 aaPredicted RBP21.94■■□□□ 1.1
CLTCL1-207ENST00000611723 POLR3AO14802 1390 aaPredicted RBP21.93■■□□□ 1.1
CLTCL1-207ENST00000611723 SLAIN2Q9P270 581 aa21.93■■□□□ 1.1
CLTCL1-207ENST00000611723 PHF8Q9UPP1 1060 aa21.93■■□□□ 1.1
CLTCL1-207ENST00000611723 LRP6O75581 1613 aa21.92■■□□□ 1.1
CLTCL1-207ENST00000611723 A0A1W2PP64 1363 aa21.92■■□□□ 1.1
CLTCL1-207ENST00000611723 JCADQ9P266 1359 aa21.92■■□□□ 1.1
CLTCL1-207ENST00000611723 ACEP12821 1306 aa21.92■■□□□ 1.1
CLTCL1-207ENST00000611723 ESCO1Q5FWF5 840 aa21.92■■□□□ 1.1
CLTCL1-207ENST00000611723 COL16A1Q07092 1604 aaPredicted RBP21.91■■□□□ 1.1
CLTCL1-207ENST00000611723 ORAI2Q96SN7 254 aa21.91■■□□□ 1.1
CLTCL1-207ENST00000611723 PMFBP1Q8TBY8 1022 aa21.9■■□□□ 1.1
CLTCL1-207ENST00000611723 KNSTRNQ9Y448 316 aa21.9■■□□□ 1.1
CLTCL1-207ENST00000611723 NGDNQ8NEJ9 315 aaKnown RBP21.89■■□□□ 1.09
CLTCL1-207ENST00000611723 KTN1Q86UP2 1357 aaKnown RBP21.87■■□□□ 1.09
CLTCL1-207ENST00000611723 NPC1L1Q9UHC9 1359 aa21.87■■□□□ 1.09
CLTCL1-207ENST00000611723 AMER1Q5JTC6 1135 aaPredicted RBP21.87■■□□□ 1.09
CLTCL1-207ENST00000611723 BRD4O60885 1362 aaPredicted RBP21.87■■□□□ 1.09
CLTCL1-207ENST00000611723 NSD3Q9BZ95 1437 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms