RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 COG3Q96JB2 828 aa10.9□□□□□ -0.66
LIG4-204ENST00000611712 ASXL1Q8IXJ9 1541 aa10.9□□□□□ -0.66
LIG4-204ENST00000611712 KIF16BQ96L93 1317 aa10.89□□□□□ -0.67
LIG4-204ENST00000611712 LNPKQ9C0E8 428 aa10.89□□□□□ -0.67
LIG4-204ENST00000611712 CARD14Q9BXL6 1004 aa10.89□□□□□ -0.67
LIG4-204ENST00000611712 SLC52A1Q9NWF4 448 aa10.89□□□□□ -0.67
LIG4-204ENST00000611712 NINLQ9Y2I6 1382 aa10.89□□□□□ -0.67
LIG4-204ENST00000611712 EIF2AK4Q9P2K8 1649 aaKnown RBP10.89□□□□□ -0.67
LIG4-204ENST00000611712 C14orf93Q9H972 538 aaKnown RBP10.89□□□□□ -0.67
LIG4-204ENST00000611712 ARHGEF5Q12774 1597 aa10.89□□□□□ -0.67
LIG4-204ENST00000611712 FOXD4L1Q9NU39 408 aa10.88□□□□□ -0.67
LIG4-204ENST00000611712 CABP1Q9NZU7 370 aa10.88□□□□□ -0.67
LIG4-204ENST00000611712 PRKAR2BP31323 418 aa10.88□□□□□ -0.67
LIG4-204ENST00000611712 MVPQ14764 893 aaKnown RBP10.87□□□□□ -0.67
LIG4-204ENST00000611712 SPINK5Q9NQ38 1064 aaPredicted RBP10.87□□□□□ -0.67
LIG4-204ENST00000611712 IGHDP01880 384 aa10.87□□□□□ -0.67
LIG4-204ENST00000611712 C22orf23Q9BZE7 217 aa10.87□□□□□ -0.67
LIG4-204ENST00000611712 ABCC2Q92887 1545 aa10.87□□□□□ -0.67
LIG4-204ENST00000611712 NOB1Q9ULX3 412 aaKnown RBP10.87□□□□□ -0.67
LIG4-204ENST00000611712 CD109Q6YHK3 1445 aa10.87□□□□□ -0.67
LIG4-204ENST00000611712 FAM69CQ0P6D2 419 aa10.87□□□□□ -0.67
LIG4-204ENST00000611712 CDK19Q9BWU1 502 aa10.87□□□□□ -0.67
LIG4-204ENST00000611712 BCORL1Q5H9F3 1711 aa10.86□□□□□ -0.67
LIG4-204ENST00000611712 GBP4Q96PP9 640 aa10.86□□□□□ -0.67
LIG4-204ENST00000611712 TMPOP42166 694 aaKnown RBP10.86□□□□□ -0.67
LIG4-204ENST00000611712 IDI1Q13907 227 aa10.86□□□□□ -0.67
LIG4-204ENST00000611712 SLC4A10Q6U841 1118 aa10.86□□□□□ -0.67
LIG4-204ENST00000611712 SAMD9LQ8IVG5 1584 aa10.86□□□□□ -0.67
LIG4-204ENST00000611712 GOLGA6L3A6NEY3 463 aa10.85□□□□□ -0.67
LIG4-204ENST00000611712 ATF7IPQ6VMQ6 1270 aa10.85□□□□□ -0.67
LIG4-204ENST00000611712 PIK3C2GO75747 1445 aa10.85□□□□□ -0.67
LIG4-204ENST00000611712 GNAI1P63096 354 aa10.85□□□□□ -0.67
LIG4-204ENST00000611712 CFAP44Q96MT7 982 aa10.85□□□□□ -0.67
LIG4-204ENST00000611712 CT47B1P0C2W7 299 aaPredicted RBP10.84□□□□□ -0.67
LIG4-204ENST00000611712 PLA2R1Q13018 1463 aa10.84□□□□□ -0.67
LIG4-204ENST00000611712 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.84□□□□□ -0.67
LIG4-204ENST00000611712 BLMP54132 1417 aaPredicted RBP10.84□□□□□ -0.67
LIG4-204ENST00000611712 IL27Q8NEV9 243 aa10.84□□□□□ -0.67
LIG4-204ENST00000611712 RTEL1-TNFRSF6BF6WH68 1400 aa10.84□□□□□ -0.67
LIG4-204ENST00000611712 MAST1Q9Y2H9 1570 aa10.83□□□□□ -0.68
LIG4-204ENST00000611712 API5Q9BZZ5 524 aaKnown RBP10.83□□□□□ -0.68
LIG4-204ENST00000611712 ATAD2Q6PL18 1390 aa10.83□□□□□ -0.68
LIG4-204ENST00000611712 LMOD2Q6P5Q4 547 aa10.83□□□□□ -0.68
LIG4-204ENST00000611712 NGDNQ8NEJ9 315 aaKnown RBP10.83□□□□□ -0.68
LIG4-204ENST00000611712 CHMP5Q9NZZ3 219 aa10.83□□□□□ -0.68
LIG4-204ENST00000611712 SSH1Q8WYL5 1049 aa10.83□□□□□ -0.68
LIG4-204ENST00000611712 STK31Q9BXU1 1019 aa10.83□□□□□ -0.68
LIG4-204ENST00000611712 BRPF3Q9ULD4 1205 aa10.83□□□□□ -0.68
LIG4-204ENST00000611712 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.82□□□□□ -0.68
LIG4-204ENST00000611712 INSRP06213 1382 aa10.82□□□□□ -0.68
LIG4-204ENST00000611712 AMPHP49418 695 aa10.82□□□□□ -0.68
LIG4-204ENST00000611712 C8orf34Q49A92 452 aa10.82□□□□□ -0.68
LIG4-204ENST00000611712 DMRT2Q9Y5R5 561 aa10.82□□□□□ -0.68
LIG4-204ENST00000611712 ZMYM4Q5VZL5 1548 aa10.82□□□□□ -0.68
LIG4-204ENST00000611712 KDM5DQ9BY66 1539 aa10.82□□□□□ -0.68
LIG4-204ENST00000611712 WDR7Q9Y4E6 1490 aa10.82□□□□□ -0.68
LIG4-204ENST00000611712 HMMRO75330 724 aa10.82□□□□□ -0.68
LIG4-204ENST00000611712 TPRNQ4KMQ1 711 aa10.82□□□□□ -0.68
LIG4-204ENST00000611712 NAP1L5Q96NT1 182 aaPredicted RBP10.82□□□□□ -0.68
LIG4-204ENST00000611712 CDC42BPAQ5VT25 1732 aa10.82□□□□□ -0.68
LIG4-204ENST00000611712 MAGI2Q86UL8 1455 aa10.82□□□□□ -0.68
LIG4-204ENST00000611712 POLR3AO14802 1390 aaPredicted RBP10.81□□□□□ -0.68
LIG4-204ENST00000611712 C1orf115Q9H7X2 142 aa10.81□□□□□ -0.68
LIG4-204ENST00000611712 ASXL2Q76L83 1435 aa10.81□□□□□ -0.68
LIG4-204ENST00000611712 NPC1L1Q9UHC9 1359 aa10.81□□□□□ -0.68
LIG4-204ENST00000611712 TXNDC2Q86VQ3 553 aa10.81□□□□□ -0.68
LIG4-204ENST00000611712 TMEM57Q8N5G2 664 aa10.81□□□□□ -0.68
LIG4-204ENST00000611712 OS9Q13438 667 aaPredicted RBP10.8□□□□□ -0.68
LIG4-204ENST00000611712 PCDHB15Q9Y5E8 787 aa10.8□□□□□ -0.68
LIG4-204ENST00000611712 ADCY10Q96PN6 1610 aa10.8□□□□□ -0.68
LIG4-204ENST00000611712 FCHSD2O94868 740 aa10.8□□□□□ -0.68
LIG4-204ENST00000611712 THUMPD2Q9BTF0 503 aaKnown RBP10.8□□□□□ -0.68
LIG4-204ENST00000611712 TNNQ9UQP3 1299 aa10.8□□□□□ -0.68
LIG4-204ENST00000611712 EID1Q9Y6B2 187 aa10.8□□□□□ -0.68
LIG4-204ENST00000611712 DDX11L8A8MPP1 907 aa10.8□□□□□ -0.68
LIG4-204ENST00000611712 FBXO31Q5XUX0 539 aaPredicted RBP10.8□□□□□ -0.68
LIG4-204ENST00000611712 WAPLQ7Z5K2 1190 aa10.8□□□□□ -0.68
LIG4-204ENST00000611712 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.8□□□□□ -0.68
LIG4-204ENST00000611712 LTV1Q96GA3 475 aaPredicted RBP10.8□□□□□ -0.68
LIG4-204ENST00000611712 KDM2BQ8NHM5 1336 aa10.79□□□□□ -0.68
LIG4-204ENST00000611712 TWISTNBQ3B726 338 aaPredicted RBP10.79□□□□□ -0.68
LIG4-204ENST00000611712 MCCP23508 829 aa10.79□□□□□ -0.68
LIG4-204ENST00000611712 TTC37Q6PGP7 1564 aa10.79□□□□□ -0.68
LIG4-204ENST00000611712 TRIM27P14373 513 aa10.79□□□□□ -0.68
LIG4-204ENST00000611712 RLBP1P12271 317 aa10.78□□□□□ -0.68
LIG4-204ENST00000611712 PREX2Q70Z35 1606 aa10.78□□□□□ -0.68
LIG4-204ENST00000611712 TRIM6-TRIM34B2RNG4 842 aa10.77□□□□□ -0.69
LIG4-204ENST00000611712 PTMSP20962 102 aa10.77□□□□□ -0.69
LIG4-204ENST00000611712 NSD2O96028 1365 aa10.77□□□□□ -0.69
LIG4-204ENST00000611712 ATP10AO60312 1499 aa10.77□□□□□ -0.69
LIG4-204ENST00000611712 ANKRD36BQ8N2N9 1353 aa10.77□□□□□ -0.69
LIG4-204ENST00000611712 RRS1Q15050 365 aaKnown RBP10.77□□□□□ -0.69
LIG4-204ENST00000611712 ZNF518AQ6AHZ1 1483 aa10.76□□□□□ -0.69
LIG4-204ENST00000611712 FBLN1P23142 703 aa10.76□□□□□ -0.69
LIG4-204ENST00000611712 NFE2L2Q16236 605 aa10.76□□□□□ -0.69
LIG4-204ENST00000611712 FYB1O15117 783 aa10.76□□□□□ -0.69
LIG4-204ENST00000611712 CCDC27Q2M243 656 aa10.76□□□□□ -0.69
LIG4-204ENST00000611712 CHD1LQ86WJ1 897 aa10.76□□□□□ -0.69
LIG4-204ENST00000611712 ATP7AQ04656 1500 aa10.76□□□□□ -0.69
LIG4-204ENST00000611712 GCC1Q96CN9 775 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 151.8 ms