RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 TRIM26Q12899 539 aaPredicted RBP21.07■□□□□ 0.96
HDDC2-204ENST00000608295 ILDR2Q71H61 639 aa21.07■□□□□ 0.96
HDDC2-204ENST00000608295 PHF23Q9BUL5 403 aaPredicted RBP21.07■□□□□ 0.96
HDDC2-204ENST00000608295 SIN3AQ96ST3 1273 aa21.06■□□□□ 0.96
HDDC2-204ENST00000608295 ABCC11Q96J66 1382 aa21.06■□□□□ 0.96
HDDC2-204ENST00000608295 FMN2Q9NZ56 1722 aa21.04■□□□□ 0.96
HDDC2-204ENST00000608295 NEUROD1Q13562 356 aa21.04■□□□□ 0.96
HDDC2-204ENST00000608295 TRAK1Q9UPV9 953 aa21.04■□□□□ 0.96
HDDC2-204ENST00000608295 ORAI2Q96SN7 254 aa21.03■□□□□ 0.96
HDDC2-204ENST00000608295 JCADQ9P266 1359 aa21.02■□□□□ 0.96
HDDC2-204ENST00000608295 ARHGEF28Q8N1W1 1705 aaKnown RBP21.02■□□□□ 0.96
HDDC2-204ENST00000608295 PRAM1Q96QH2 718 aa21.02■□□□□ 0.96
HDDC2-204ENST00000608295 RGPD8O14715 1765 aaPredicted RBP21.02■□□□□ 0.96
HDDC2-204ENST00000608295 SHPRHQ149N8 1683 aa21.02■□□□□ 0.95
HDDC2-204ENST00000608295 DLC1Q96QB1 1528 aa20.99■□□□□ 0.95
HDDC2-204ENST00000608295 POGKQ9P215 609 aa20.99■□□□□ 0.95
HDDC2-204ENST00000608295 LRP6O75581 1613 aa20.99■□□□□ 0.95
HDDC2-204ENST00000608295 ESCO1Q5FWF5 840 aa20.97■□□□□ 0.95
HDDC2-204ENST00000608295 HIRIP3Q9BW71 556 aaPredicted RBP20.97■□□□□ 0.95
HDDC2-204ENST00000608295 MINK1Q8N4C8 1332 aaPredicted RBP20.97■□□□□ 0.95
HDDC2-204ENST00000608295 KIAA1210Q9ULL0 1709 aa20.96■□□□□ 0.95
HDDC2-204ENST00000608295 NUTM2BA6NNL0 878 aaPredicted RBP20.96■□□□□ 0.95
HDDC2-204ENST00000608295 NUTM2EB1AL46 878 aaPredicted RBP20.96■□□□□ 0.95
HDDC2-204ENST00000608295 XPCQ01831 940 aaPredicted RBP20.96■□□□□ 0.95
HDDC2-204ENST00000608295 NUTM2AQ8IVF1 878 aaPredicted RBP20.96■□□□□ 0.95
HDDC2-204ENST00000608295 L3MBTL2Q969R5 705 aa20.94■□□□□ 0.94
HDDC2-204ENST00000608295 MEX3CQ5U5Q3 659 aaKnown RBP20.93■□□□□ 0.94
HDDC2-204ENST00000608295 ADGRB2O60241 1585 aa20.93■□□□□ 0.94
HDDC2-204ENST00000608295 USP32Q8NFA0 1604 aa20.93■□□□□ 0.94
HDDC2-204ENST00000608295 NBPF1Q3BBV0 1214 aa20.92■□□□□ 0.94
HDDC2-204ENST00000608295 KIF1AQ12756 1690 aa20.92■□□□□ 0.94
HDDC2-204ENST00000608295 PNPLA6Q8IY17 1366 aa20.9■□□□□ 0.94
HDDC2-204ENST00000608295 TRPM1Q7Z4N2 1603 aa20.89■□□□□ 0.94
HDDC2-204ENST00000608295 FOXO3O43524 673 aa20.89■□□□□ 0.93
HDDC2-204ENST00000608295 STAC3Q96MF2 364 aa20.89■□□□□ 0.93
HDDC2-204ENST00000608295 SIRT1Q96EB6 747 aa20.88■□□□□ 0.93
HDDC2-204ENST00000608295 RGS17Q9UGC6 210 aaPredicted RBP20.88■□□□□ 0.93
HDDC2-204ENST00000608295 PXDNQ92626 1479 aa20.88■□□□□ 0.93
HDDC2-204ENST00000608295 SPATA31A6Q5VVP1 1343 aa20.87■□□□□ 0.93
HDDC2-204ENST00000608295 LRRC59Q96AG4 307 aaKnown RBP20.87■□□□□ 0.93
HDDC2-204ENST00000608295 PLEKHG5O94827 1062 aa20.86■□□□□ 0.93
HDDC2-204ENST00000608295 QRICH2Q9H0J4 1663 aa20.86■□□□□ 0.93
HDDC2-204ENST00000608295 NPHP3Q7Z494 1330 aa20.85■□□□□ 0.93
HDDC2-204ENST00000608295 TULP4Q9NRJ4 1543 aa20.84■□□□□ 0.93
HDDC2-204ENST00000608295 SOS2Q07890 1332 aaPredicted RBP20.84■□□□□ 0.93
HDDC2-204ENST00000608295 PMFBP1Q8TBY8 1022 aa20.84■□□□□ 0.93
HDDC2-204ENST00000608295 PCGF6Q9BYE7 350 aa20.84■□□□□ 0.93
HDDC2-204ENST00000608295 TONSLQ96HA7 1378 aa20.83■□□□□ 0.92
HDDC2-204ENST00000608295 POTEAQ6S8J7 498 aa20.82■□□□□ 0.92
HDDC2-204ENST00000608295 PHF8Q9UPP1 1060 aa20.82■□□□□ 0.92
HDDC2-204ENST00000608295 ITSN1Q15811 1721 aa20.81■□□□□ 0.92
HDDC2-204ENST00000608295 PRR36Q9H6K5 1346 aa20.81■□□□□ 0.92
HDDC2-204ENST00000608295 ADAMTS2O95450 1211 aa20.81■□□□□ 0.92
HDDC2-204ENST00000608295 ANKARQ7Z5J8 1434 aa20.8■□□□□ 0.92
HDDC2-204ENST00000608295 COL22A1Q8NFW1 1626 aaPredicted RBP20.8■□□□□ 0.92
HDDC2-204ENST00000608295 ROCK2O75116 1388 aaKnown RBP20.8■□□□□ 0.92
HDDC2-204ENST00000608295 WASLO00401 505 aaPredicted RBP20.79■□□□□ 0.92
HDDC2-204ENST00000608295 C8orf37Q96NL8 207 aa20.79■□□□□ 0.92
HDDC2-204ENST00000608295 ATP7BP35670 1465 aa20.78■□□□□ 0.92
HDDC2-204ENST00000608295 NBPF8Q3BBV2 869 aa20.78■□□□□ 0.92
HDDC2-204ENST00000608295 KRT28Q7Z3Y7 464 aa20.77■□□□□ 0.92
HDDC2-204ENST00000608295 TOPAZ1Q8N9V7 1692 aa20.77■□□□□ 0.91
HDDC2-204ENST00000608295 EIF3AQ14152 1382 aaKnown RBP20.76■□□□□ 0.91
HDDC2-204ENST00000608295 LMOD2Q6P5Q4 547 aa20.76■□□□□ 0.91
HDDC2-204ENST00000608295 AFF2P51816 1311 aa20.76■□□□□ 0.91
HDDC2-204ENST00000608295 CENPJQ9HC77 1338 aaPredicted RBP20.76■□□□□ 0.91
HDDC2-204ENST00000608295 SOCS7O14512 581 aa20.75■□□□□ 0.91
HDDC2-204ENST00000608295 TNS3Q68CZ2 1445 aa20.74■□□□□ 0.91
HDDC2-204ENST00000608295 ABCA3Q99758 1704 aa20.74■□□□□ 0.91
HDDC2-204ENST00000608295 TRPM3Q9HCF6 1732 aaPredicted RBP20.74■□□□□ 0.91
HDDC2-204ENST00000608295 MARF1Q9Y4F3 1742 aaKnown RBP20.74■□□□□ 0.91
HDDC2-204ENST00000608295 PSME1Q06323 249 aa20.73■□□□□ 0.91
HDDC2-204ENST00000608295 CDK19Q9BWU1 502 aa20.73■□□□□ 0.91
HDDC2-204ENST00000608295 SPATA31A3Q5VYP0 1347 aa20.72■□□□□ 0.91
HDDC2-204ENST00000608295 NUDT16Q96DE0 195 aaKnown RBP20.71■□□□□ 0.91
HDDC2-204ENST00000608295 SRPK2P78362 688 aaKnown RBP20.7■□□□□ 0.9
HDDC2-204ENST00000608295 NGDNQ8NEJ9 315 aaKnown RBP20.7■□□□□ 0.9
HDDC2-204ENST00000608295 RALGAPBQ86X10 1494 aa20.69■□□□□ 0.9
HDDC2-204ENST00000608295 CABLES1Q8TDN4 633 aa20.69■□□□□ 0.9
HDDC2-204ENST00000608295 NGLY1Q96IV0 654 aa20.69■□□□□ 0.9
HDDC2-204ENST00000608295 CABP2Q9NPB3 220 aa20.69■□□□□ 0.9
HDDC2-204ENST00000608295 ALS2Q96Q42 1657 aa20.68■□□□□ 0.9
HDDC2-204ENST00000608295 HAP1P54257 671 aaPredicted RBP20.68■□□□□ 0.9
HDDC2-204ENST00000608295 ZNF772Q68DY9 489 aaPredicted RBP20.68■□□□□ 0.9
HDDC2-204ENST00000608295 GPRASP1Q5JY77 1395 aa20.68■□□□□ 0.9
HDDC2-204ENST00000608295 PAK3O75914 559 aaPredicted RBP20.67■□□□□ 0.9
HDDC2-204ENST00000608295 CARD11Q9BXL7 1154 aa20.66■□□□□ 0.9
HDDC2-204ENST00000608295 PPIP5K1Q6PFW1 1433 aa20.65■□□□□ 0.9
HDDC2-204ENST00000608295 SBNO1A3KN83 1393 aa20.65■□□□□ 0.9
HDDC2-204ENST00000608295 PLCH1Q4KWH8 1693 aa20.64■□□□□ 0.89
HDDC2-204ENST00000608295 ARHGEF10O15013 1369 aa20.62■□□□□ 0.89
HDDC2-204ENST00000608295 CRYBG1Q9Y4K1 1723 aa20.61■□□□□ 0.89
HDDC2-204ENST00000608295 USP21Q9UK80 565 aa20.61■□□□□ 0.89
HDDC2-204ENST00000608295 ACEP12821 1306 aa20.6■□□□□ 0.89
HDDC2-204ENST00000608295 NUTM2GQ5VZR2 741 aa20.6■□□□□ 0.89
HDDC2-204ENST00000608295 CCDC61Q9Y6R9 512 aa20.6■□□□□ 0.89
HDDC2-204ENST00000608295 PHRF1Q9P1Y6 1649 aaKnown RBP20.6■□□□□ 0.89
HDDC2-204ENST00000608295 QTRT2Q9H974 415 aaKnown RBP20.59■□□□□ 0.89
HDDC2-204ENST00000608295 EVC2Q86UK5 1308 aa20.58■□□□□ 0.89
HDDC2-204ENST00000608295 RXRBP28702 533 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms