RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 LRCH3Q96II8 777 aa9.16□□□□□ -0.94
LINC00397-202ENST00000606785 TMEM134Q9H6X4 195 aa9.16□□□□□ -0.94
LINC00397-202ENST00000606785 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.16□□□□□ -0.94
LINC00397-202ENST00000606785 SEPT9Q9UHD8 586 aaPredicted RBP9.16□□□□□ -0.94
LINC00397-202ENST00000606785 MOXD2PA6NHM9 499 aa9.15□□□□□ -0.94
LINC00397-202ENST00000606785 WWC1Q8IX03 1113 aa9.15□□□□□ -0.94
LINC00397-202ENST00000606785 TATDN2Q93075 761 aa9.15□□□□□ -0.94
LINC00397-202ENST00000606785 GDPD2Q9HCC8 539 aa9.15□□□□□ -0.94
LINC00397-202ENST00000606785 HPS5Q9UPZ3 1129 aa9.15□□□□□ -0.94
LINC00397-202ENST00000606785 TRIM6-TRIM34B2RNG4 842 aa9.14□□□□□ -0.95
LINC00397-202ENST00000606785 C3orf80F5H4A9 247 aa9.14□□□□□ -0.95
LINC00397-202ENST00000606785 LILRB3O75022 631 aa9.14□□□□□ -0.95
LINC00397-202ENST00000606785 QPCTQ16769 361 aa9.14□□□□□ -0.95
LINC00397-202ENST00000606785 CSPP1Q1MSJ5 1256 aa9.14□□□□□ -0.95
LINC00397-202ENST00000606785 PRM3Q9NNZ6 103 aa9.14□□□□□ -0.95
LINC00397-202ENST00000606785 PACS2Q86VP3 889 aa9.13□□□□□ -0.95
LINC00397-202ENST00000606785 PNMA3Q9UL41 463 aa9.13□□□□□ -0.95
LINC00397-202ENST00000606785 NDUFV2P19404 249 aa9.12□□□□□ -0.95
LINC00397-202ENST00000606785 TRAIPQ9BWF2 469 aa9.12□□□□□ -0.95
LINC00397-202ENST00000606785 PCDHB15Q9Y5E8 787 aa9.12□□□□□ -0.95
LINC00397-202ENST00000606785 AP1G2O75843 785 aa9.11□□□□□ -0.95
LINC00397-202ENST00000606785 NECTIN2Q92692 538 aa9.11□□□□□ -0.95
LINC00397-202ENST00000606785 PRKD2Q9BZL6 878 aa9.11□□□□□ -0.95
LINC00397-202ENST00000606785 V9GY48 417 aaPredicted RBP9.11□□□□□ -0.95
LINC00397-202ENST00000606785 ABL2P42684 1182 aa9.1□□□□□ -0.95
LINC00397-202ENST00000606785 RTL5Q5HYW3 569 aaPredicted RBP9.1□□□□□ -0.95
LINC00397-202ENST00000606785 PRPF38BQ5VTL8 546 aaKnown RBP9.1□□□□□ -0.95
LINC00397-202ENST00000606785 RDH13Q8NBN7 331 aa9.1□□□□□ -0.95
LINC00397-202ENST00000606785 NUTM2BA6NNL0 878 aaPredicted RBP9.09□□□□□ -0.95
LINC00397-202ENST00000606785 NUTM2EB1AL46 878 aaPredicted RBP9.09□□□□□ -0.95
LINC00397-202ENST00000606785 KDM4AO75164 1064 aa9.09□□□□□ -0.95
LINC00397-202ENST00000606785 RANGAP1P46060 587 aaPredicted RBP9.09□□□□□ -0.95
LINC00397-202ENST00000606785 NUTM2DQ5VT03 806 aaPredicted RBP9.09□□□□□ -0.95
LINC00397-202ENST00000606785 NUTM2AQ8IVF1 878 aaPredicted RBP9.09□□□□□ -0.95
LINC00397-202ENST00000606785 TBC1D2BQ9UPU7 963 aa9.09□□□□□ -0.95
LINC00397-202ENST00000606785 USP17L8P0C7I0 530 aa9.08□□□□□ -0.96
LINC00397-202ENST00000606785 USP46P62068 366 aa9.08□□□□□ -0.96
LINC00397-202ENST00000606785 TJAP1Q5JTD0 557 aa9.08□□□□□ -0.96
LINC00397-202ENST00000606785 SMAPO00193 183 aa9.07□□□□□ -0.96
LINC00397-202ENST00000606785 RSPH4AQ5TD94 716 aa9.07□□□□□ -0.96
LINC00397-202ENST00000606785 CABLES1Q8TDN4 633 aa9.07□□□□□ -0.96
LINC00397-202ENST00000606785 CALR3Q96L12 384 aaKnown RBP9.07□□□□□ -0.96
LINC00397-202ENST00000606785 ZBTB3Q9H5J0 574 aa9.07□□□□□ -0.96
LINC00397-202ENST00000606785 GCGRP47871 477 aa9.06□□□□□ -0.96
LINC00397-202ENST00000606785 PPP4CP60510 307 aa9.06□□□□□ -0.96
LINC00397-202ENST00000606785 ZNF787Q6DD87 383 aa9.06□□□□□ -0.96
LINC00397-202ENST00000606785 KCTD17Q8N5Z5 321 aa9.06□□□□□ -0.96
LINC00397-202ENST00000606785 POM121CA8CG34 1229 aa9.05□□□□□ -0.96
LINC00397-202ENST00000606785 HOXA2O43364 376 aa9.05□□□□□ -0.96
LINC00397-202ENST00000606785 PPP1R15AO75807 674 aaPredicted RBP9.05□□□□□ -0.96
LINC00397-202ENST00000606785 GLMNQ92990 594 aa9.05□□□□□ -0.96
LINC00397-202ENST00000606785 CCDC9Q9Y3X0 531 aaKnown RBP9.05□□□□□ -0.96
LINC00397-202ENST00000606785 FDX1P10109 184 aa9.04□□□□□ -0.96
LINC00397-202ENST00000606785 RETREG2Q8NC44 543 aa9.04□□□□□ -0.96
LINC00397-202ENST00000606785 GJD4Q96KN9 370 aaPredicted RBP9.04□□□□□ -0.96
LINC00397-202ENST00000606785 IL21Q9HBE4 155 aa9.04□□□□□ -0.96
LINC00397-202ENST00000606785 NDUFB9Q9Y6M9 179 aa9.04□□□□□ -0.96
LINC00397-202ENST00000606785 PPP1R18Q6NYC8 613 aa9.03□□□□□ -0.96
LINC00397-202ENST00000606785 NPM2Q86SE8 214 aaKnown RBP9.02□□□□□ -0.97
LINC00397-202ENST00000606785 MTRQ99707 1265 aa9.02□□□□□ -0.97
LINC00397-202ENST00000606785 PDZRN3Q9UPQ7 1066 aa9.01□□□□□ -0.97
LINC00397-202ENST00000606785 SLC10A3P09131 477 aa9□□□□□ -0.97
LINC00397-202ENST00000606785 IRF5Q13568 498 aa9□□□□□ -0.97
LINC00397-202ENST00000606785 ZNF775Q96BV0 537 aaPredicted RBP9□□□□□ -0.97
LINC00397-202ENST00000606785 EIF4ENIF1Q9NRA8 985 aaKnown RBP9□□□□□ -0.97
LINC00397-202ENST00000606785 PCDHGC3Q9UN70 934 aa9□□□□□ -0.97
LINC00397-202ENST00000606785 MTMR2Q13614 643 aa8.99□□□□□ -0.97
LINC00397-202ENST00000606785 WASHC4Q2M389 1173 aa8.99□□□□□ -0.97
LINC00397-202ENST00000606785 SWT1Q5T5J6 900 aaKnown RBP8.99□□□□□ -0.97
LINC00397-202ENST00000606785 AEBP1Q8IUX7 1158 aa8.99□□□□□ -0.97
LINC00397-202ENST00000606785 ACIN1Q9UKV3 1341 aaKnown RBP8.99□□□□□ -0.97
LINC00397-202ENST00000606785 GUCA2AQ02747 115 aa8.98□□□□□ -0.97
LINC00397-202ENST00000606785 CTDSPL2Q05D32 466 aa8.98□□□□□ -0.97
LINC00397-202ENST00000606785 HELBQ8NG08 1087 aaPredicted RBP8.98□□□□□ -0.97
LINC00397-202ENST00000606785 HMX1Q9NP08 348 aaPredicted RBP8.98□□□□□ -0.97
LINC00397-202ENST00000606785 PDE4CQ08493 712 aa8.97□□□□□ -0.97
LINC00397-202ENST00000606785 HDGFL1Q5TGJ6 251 aa8.97□□□□□ -0.97
LINC00397-202ENST00000606785 SAMD7Q7Z3H4 446 aa8.97□□□□□ -0.97
LINC00397-202ENST00000606785 HLA-CQ95604 372 aa8.97□□□□□ -0.97
LINC00397-202ENST00000606785 TRIM34Q9BYJ4 488 aa8.97□□□□□ -0.97
LINC00397-202ENST00000606785 GPR37L1O60883 481 aa8.96□□□□□ -0.98
LINC00397-202ENST00000606785 ADAMTS19Q8TE59 1207 aa8.96□□□□□ -0.98
LINC00397-202ENST00000606785 HDGFP51858 240 aaKnown RBP8.95□□□□□ -0.98
LINC00397-202ENST00000606785 GRIPAP1Q4V328 841 aa8.95□□□□□ -0.98
LINC00397-202ENST00000606785 PBXIP1Q96AQ6 731 aa8.95□□□□□ -0.98
LINC00397-202ENST00000606785 CFAP99D6REC4 459 aa8.94□□□□□ -0.98
LINC00397-202ENST00000606785 GGCXP38435 758 aa8.94□□□□□ -0.98
LINC00397-202ENST00000606785 SLC4A3P48751 1232 aa8.94□□□□□ -0.98
LINC00397-202ENST00000606785 LRRN4Q8WUT4 740 aa8.94□□□□□ -0.98
LINC00397-202ENST00000606785 TSC1Q92574 1164 aa8.93□□□□□ -0.98
LINC00397-202ENST00000606785 ZNF516Q92618 1163 aa8.93□□□□□ -0.98
LINC00397-202ENST00000606785 C6orf229H3BNL8 230 aa8.92□□□□□ -0.98
LINC00397-202ENST00000606785 VAC14Q08AM6 782 aa8.92□□□□□ -0.98
LINC00397-202ENST00000606785 FUT2Q10981 343 aa8.92□□□□□ -0.98
LINC00397-202ENST00000606785 CFAP70Q5T0N1 1121 aa8.92□□□□□ -0.98
LINC00397-202ENST00000606785 SLF2Q8IX21 1173 aa8.92□□□□□ -0.98
LINC00397-202ENST00000606785 CFHP08603 1231 aa8.9□□□□□ -0.98
LINC00397-202ENST00000606785 PPP1R12CQ9BZL4 782 aa8.9□□□□□ -0.98
LINC00397-202ENST00000606785 ALG2Q9H553 416 aa8.9□□□□□ -0.98
LINC00397-202ENST00000606785 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms