RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 LRCH3Q96II8 777 aa9.16□□□□□ -0.94
LINC00397-202ENST00000606785 TMEM134Q9H6X4 195 aa9.16□□□□□ -0.94
LINC00397-202ENST00000606785 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.16□□□□□ -0.94
LINC00397-202ENST00000606785 SEPT9Q9UHD8 586 aaPredicted RBP9.16□□□□□ -0.94
LINC00397-202ENST00000606785 MOXD2PA6NHM9 499 aa9.15□□□□□ -0.94
LINC00397-202ENST00000606785 WWC1Q8IX03 1113 aa9.15□□□□□ -0.94
LINC00397-202ENST00000606785 TATDN2Q93075 761 aa9.15□□□□□ -0.94
LINC00397-202ENST00000606785 GDPD2Q9HCC8 539 aa9.15□□□□□ -0.94
LINC00397-202ENST00000606785 HPS5Q9UPZ3 1129 aa9.15□□□□□ -0.94
LINC00397-202ENST00000606785 TRIM6-TRIM34B2RNG4 842 aa9.14□□□□□ -0.95
LINC00397-202ENST00000606785 C3orf80F5H4A9 247 aa9.14□□□□□ -0.95
LINC00397-202ENST00000606785 LILRB3O75022 631 aa9.14□□□□□ -0.95
LINC00397-202ENST00000606785 QPCTQ16769 361 aa9.14□□□□□ -0.95
LINC00397-202ENST00000606785 CSPP1Q1MSJ5 1256 aa9.14□□□□□ -0.95
LINC00397-202ENST00000606785 PRM3Q9NNZ6 103 aa9.14□□□□□ -0.95
LINC00397-202ENST00000606785 PACS2Q86VP3 889 aa9.13□□□□□ -0.95
LINC00397-202ENST00000606785 PNMA3Q9UL41 463 aa9.13□□□□□ -0.95
LINC00397-202ENST00000606785 NDUFV2P19404 249 aa9.12□□□□□ -0.95
LINC00397-202ENST00000606785 TRAIPQ9BWF2 469 aa9.12□□□□□ -0.95
LINC00397-202ENST00000606785 PCDHB15Q9Y5E8 787 aa9.12□□□□□ -0.95
LINC00397-202ENST00000606785 AP1G2O75843 785 aa9.11□□□□□ -0.95
LINC00397-202ENST00000606785 NECTIN2Q92692 538 aa9.11□□□□□ -0.95
LINC00397-202ENST00000606785 PRKD2Q9BZL6 878 aa9.11□□□□□ -0.95
LINC00397-202ENST00000606785 V9GY48 417 aaPredicted RBP9.11□□□□□ -0.95
LINC00397-202ENST00000606785 ABL2P42684 1182 aa9.1□□□□□ -0.95
LINC00397-202ENST00000606785 RTL5Q5HYW3 569 aaPredicted RBP9.1□□□□□ -0.95
LINC00397-202ENST00000606785 PRPF38BQ5VTL8 546 aaKnown RBP9.1□□□□□ -0.95
LINC00397-202ENST00000606785 RDH13Q8NBN7 331 aa9.1□□□□□ -0.95
LINC00397-202ENST00000606785 NUTM2BA6NNL0 878 aaPredicted RBP9.09□□□□□ -0.95
LINC00397-202ENST00000606785 NUTM2EB1AL46 878 aaPredicted RBP9.09□□□□□ -0.95
LINC00397-202ENST00000606785 KDM4AO75164 1064 aa9.09□□□□□ -0.95
LINC00397-202ENST00000606785 RANGAP1P46060 587 aaPredicted RBP9.09□□□□□ -0.95
LINC00397-202ENST00000606785 NUTM2DQ5VT03 806 aaPredicted RBP9.09□□□□□ -0.95
LINC00397-202ENST00000606785 NUTM2AQ8IVF1 878 aaPredicted RBP9.09□□□□□ -0.95
LINC00397-202ENST00000606785 TBC1D2BQ9UPU7 963 aa9.09□□□□□ -0.95
LINC00397-202ENST00000606785 USP17L8P0C7I0 530 aa9.08□□□□□ -0.96
LINC00397-202ENST00000606785 USP46P62068 366 aa9.08□□□□□ -0.96
LINC00397-202ENST00000606785 TJAP1Q5JTD0 557 aa9.08□□□□□ -0.96
LINC00397-202ENST00000606785 SMAPO00193 183 aa9.07□□□□□ -0.96
LINC00397-202ENST00000606785 RSPH4AQ5TD94 716 aa9.07□□□□□ -0.96
LINC00397-202ENST00000606785 CABLES1Q8TDN4 633 aa9.07□□□□□ -0.96
LINC00397-202ENST00000606785 CALR3Q96L12 384 aaKnown RBP9.07□□□□□ -0.96
LINC00397-202ENST00000606785 ZBTB3Q9H5J0 574 aa9.07□□□□□ -0.96
LINC00397-202ENST00000606785 GCGRP47871 477 aa9.06□□□□□ -0.96
LINC00397-202ENST00000606785 PPP4CP60510 307 aa9.06□□□□□ -0.96
LINC00397-202ENST00000606785 ZNF787Q6DD87 383 aa9.06□□□□□ -0.96
LINC00397-202ENST00000606785 KCTD17Q8N5Z5 321 aa9.06□□□□□ -0.96
LINC00397-202ENST00000606785 POM121CA8CG34 1229 aa9.05□□□□□ -0.96
LINC00397-202ENST00000606785 HOXA2O43364 376 aa9.05□□□□□ -0.96
LINC00397-202ENST00000606785 PPP1R15AO75807 674 aaPredicted RBP9.05□□□□□ -0.96
LINC00397-202ENST00000606785 GLMNQ92990 594 aa9.05□□□□□ -0.96
LINC00397-202ENST00000606785 CCDC9Q9Y3X0 531 aaKnown RBP9.05□□□□□ -0.96
LINC00397-202ENST00000606785 FDX1P10109 184 aa9.04□□□□□ -0.96
LINC00397-202ENST00000606785 RETREG2Q8NC44 543 aa9.04□□□□□ -0.96
LINC00397-202ENST00000606785 GJD4Q96KN9 370 aaPredicted RBP9.04□□□□□ -0.96
LINC00397-202ENST00000606785 IL21Q9HBE4 155 aa9.04□□□□□ -0.96
LINC00397-202ENST00000606785 NDUFB9Q9Y6M9 179 aa9.04□□□□□ -0.96
LINC00397-202ENST00000606785 PPP1R18Q6NYC8 613 aa9.03□□□□□ -0.96
LINC00397-202ENST00000606785 NPM2Q86SE8 214 aaKnown RBP9.02□□□□□ -0.97
LINC00397-202ENST00000606785 MTRQ99707 1265 aa9.02□□□□□ -0.97
LINC00397-202ENST00000606785 PDZRN3Q9UPQ7 1066 aa9.01□□□□□ -0.97
LINC00397-202ENST00000606785 SLC10A3P09131 477 aa9□□□□□ -0.97
LINC00397-202ENST00000606785 IRF5Q13568 498 aa9□□□□□ -0.97
LINC00397-202ENST00000606785 ZNF775Q96BV0 537 aaPredicted RBP9□□□□□ -0.97
LINC00397-202ENST00000606785 EIF4ENIF1Q9NRA8 985 aaKnown RBP9□□□□□ -0.97
LINC00397-202ENST00000606785 PCDHGC3Q9UN70 934 aa9□□□□□ -0.97
LINC00397-202ENST00000606785 MTMR2Q13614 643 aa8.99□□□□□ -0.97
LINC00397-202ENST00000606785 WASHC4Q2M389 1173 aa8.99□□□□□ -0.97
LINC00397-202ENST00000606785 SWT1Q5T5J6 900 aaKnown RBP8.99□□□□□ -0.97
LINC00397-202ENST00000606785 AEBP1Q8IUX7 1158 aa8.99□□□□□ -0.97
LINC00397-202ENST00000606785 ACIN1Q9UKV3 1341 aaKnown RBP8.99□□□□□ -0.97
LINC00397-202ENST00000606785 GUCA2AQ02747 115 aa8.98□□□□□ -0.97
LINC00397-202ENST00000606785 CTDSPL2Q05D32 466 aa8.98□□□□□ -0.97
LINC00397-202ENST00000606785 HELBQ8NG08 1087 aaPredicted RBP8.98□□□□□ -0.97
LINC00397-202ENST00000606785 HMX1Q9NP08 348 aaPredicted RBP8.98□□□□□ -0.97
LINC00397-202ENST00000606785 PDE4CQ08493 712 aa8.97□□□□□ -0.97
LINC00397-202ENST00000606785 HDGFL1Q5TGJ6 251 aa8.97□□□□□ -0.97
LINC00397-202ENST00000606785 SAMD7Q7Z3H4 446 aa8.97□□□□□ -0.97
LINC00397-202ENST00000606785 HLA-CQ95604 372 aa8.97□□□□□ -0.97
LINC00397-202ENST00000606785 TRIM34Q9BYJ4 488 aa8.97□□□□□ -0.97
LINC00397-202ENST00000606785 GPR37L1O60883 481 aa8.96□□□□□ -0.98
LINC00397-202ENST00000606785 ADAMTS19Q8TE59 1207 aa8.96□□□□□ -0.98
LINC00397-202ENST00000606785 HDGFP51858 240 aaKnown RBP8.95□□□□□ -0.98
LINC00397-202ENST00000606785 GRIPAP1Q4V328 841 aa8.95□□□□□ -0.98
LINC00397-202ENST00000606785 PBXIP1Q96AQ6 731 aa8.95□□□□□ -0.98
LINC00397-202ENST00000606785 CFAP99D6REC4 459 aa8.94□□□□□ -0.98
LINC00397-202ENST00000606785 GGCXP38435 758 aa8.94□□□□□ -0.98
LINC00397-202ENST00000606785 SLC4A3P48751 1232 aa8.94□□□□□ -0.98
LINC00397-202ENST00000606785 LRRN4Q8WUT4 740 aa8.94□□□□□ -0.98
LINC00397-202ENST00000606785 TSC1Q92574 1164 aa8.93□□□□□ -0.98
LINC00397-202ENST00000606785 ZNF516Q92618 1163 aa8.93□□□□□ -0.98
LINC00397-202ENST00000606785 C6orf229H3BNL8 230 aa8.92□□□□□ -0.98
LINC00397-202ENST00000606785 VAC14Q08AM6 782 aa8.92□□□□□ -0.98
LINC00397-202ENST00000606785 FUT2Q10981 343 aa8.92□□□□□ -0.98
LINC00397-202ENST00000606785 CFAP70Q5T0N1 1121 aa8.92□□□□□ -0.98
LINC00397-202ENST00000606785 SLF2Q8IX21 1173 aa8.92□□□□□ -0.98
LINC00397-202ENST00000606785 CFHP08603 1231 aa8.9□□□□□ -0.98
LINC00397-202ENST00000606785 PPP1R12CQ9BZL4 782 aa8.9□□□□□ -0.98
LINC00397-202ENST00000606785 ALG2Q9H553 416 aa8.9□□□□□ -0.98
LINC00397-202ENST00000606785 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms