RNA–Protein interactions for RNA: ENST00000604911.1

LSM1P2-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM1P2, Length 322 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P2-201ENST00000604911 VSIG10Q8N0Z9 540 aa9.52□□□□□ -0.89
LSM1P2-201ENST00000604911 CRIPAKQ8N1N5 446 aa9.52□□□□□ -0.89
LSM1P2-201ENST00000604911 ST8SIA5O15466 376 aa9.51□□□□□ -0.89
LSM1P2-201ENST00000604911 Q3C1V9 767 aa9.51□□□□□ -0.89
LSM1P2-201ENST00000604911 MINK1Q8N4C8 1332 aaPredicted RBP9.51□□□□□ -0.89
LSM1P2-201ENST00000604911 KDM4AO75164 1064 aa9.5□□□□□ -0.89
LSM1P2-201ENST00000604911 AVPP01185 164 aa9.5□□□□□ -0.89
LSM1P2-201ENST00000604911 MDM2Q00987 491 aaPredicted RBP9.49□□□□□ -0.89
LSM1P2-201ENST00000604911 ARXQ96QS3 562 aa9.49□□□□□ -0.89
LSM1P2-201ENST00000604911 CCDC102AQ96A19 550 aa9.48□□□□□ -0.89
LSM1P2-201ENST00000604911 TULP1O00294 542 aaPredicted RBP9.47□□□□□ -0.89
LSM1P2-201ENST00000604911 DXOO77932 396 aaKnown RBP9.47□□□□□ -0.89
LSM1P2-201ENST00000604911 USP46P62068 366 aa9.47□□□□□ -0.89
LSM1P2-201ENST00000604911 HLA-CQ95604 372 aa9.47□□□□□ -0.89
LSM1P2-201ENST00000604911 USB1Q9BQ65 265 aaKnown RBP9.47□□□□□ -0.89
LSM1P2-201ENST00000604911 EIF5BO60841 1220 aaKnown RBP9.46□□□□□ -0.9
LSM1P2-201ENST00000604911 ZBTB24O43167 697 aaPredicted RBP9.45□□□□□ -0.9
LSM1P2-201ENST00000604911 HOXA2O43364 376 aa9.45□□□□□ -0.9
LSM1P2-201ENST00000604911 TRIM32Q13049 653 aa9.45□□□□□ -0.9
LSM1P2-201ENST00000604911 CYP4X1Q8N118 509 aa9.45□□□□□ -0.9
LSM1P2-201ENST00000604911 WNT7AO00755 349 aa9.44□□□□□ -0.9
LSM1P2-201ENST00000604911 SMCPP49901 116 aaPredicted RBP9.44□□□□□ -0.9
LSM1P2-201ENST00000604911 GPCPD1Q9NPB8 672 aa9.44□□□□□ -0.9
LSM1P2-201ENST00000604911 FAM217BQ9NTX9 383 aaPredicted RBP9.44□□□□□ -0.9
LSM1P2-201ENST00000604911 DACH1Q9UI36 760 aa9.44□□□□□ -0.9
LSM1P2-201ENST00000604911 CTC1Q2NKJ3 1217 aa9.43□□□□□ -0.9
LSM1P2-201ENST00000604911 CLCN1P35523 988 aa9.42□□□□□ -0.9
LSM1P2-201ENST00000604911 LCE2AQ5TA79 106 aaPredicted RBP9.41□□□□□ -0.9
LSM1P2-201ENST00000604911 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.41□□□□□ -0.9
LSM1P2-201ENST00000604911 AXIN1O15169 862 aa9.4□□□□□ -0.9
LSM1P2-201ENST00000604911 SMPD1P17405 629 aa9.4□□□□□ -0.9
LSM1P2-201ENST00000604911 RANGAP1P46060 587 aaPredicted RBP9.4□□□□□ -0.9
LSM1P2-201ENST00000604911 GUCA2AQ02747 115 aa9.4□□□□□ -0.9
LSM1P2-201ENST00000604911 SNIP1Q8TAD8 396 aaKnown RBP9.4□□□□□ -0.9
LSM1P2-201ENST00000604911 TTC24A2A3L6 582 aaPredicted RBP9.39□□□□□ -0.91
LSM1P2-201ENST00000604911 MRGPRX2Q96LB1 330 aa9.39□□□□□ -0.91
LSM1P2-201ENST00000604911 REPIN1Q9BWE0 567 aaKnown RBP9.38□□□□□ -0.91
LSM1P2-201ENST00000604911 SKOR1P84550 965 aa9.37□□□□□ -0.91
LSM1P2-201ENST00000604911 SYMPKQ92797 1274 aaKnown RBP9.37□□□□□ -0.91
LSM1P2-201ENST00000604911 BCL11AQ9H165 835 aa9.37□□□□□ -0.91
LSM1P2-201ENST00000604911 GMPR2Q9P2T1 348 aaKnown RBP9.37□□□□□ -0.91
LSM1P2-201ENST00000604911 JUNDP17535 347 aa9.36□□□□□ -0.91
LSM1P2-201ENST00000604911 J3QL48 77 aa9.35□□□□□ -0.91
LSM1P2-201ENST00000604911 WNT7BP56706 349 aa9.35□□□□□ -0.91
LSM1P2-201ENST00000604911 TREML4Q6UXN2 200 aa9.35□□□□□ -0.91
LSM1P2-201ENST00000604911 PCDHGC3Q9UN70 934 aa9.35□□□□□ -0.91
LSM1P2-201ENST00000604911 RETREG3Q86VR2 466 aa9.34□□□□□ -0.91
LSM1P2-201ENST00000604911 CCDC24Q8N4L8 307 aa9.34□□□□□ -0.91
LSM1P2-201ENST00000604911 RC3H1Q5TC82 1133 aaKnown RBP9.33□□□□□ -0.92
LSM1P2-201ENST00000604911 NUTM1Q86Y26 1132 aa9.33□□□□□ -0.92
LSM1P2-201ENST00000604911 BARGINQ6ZT62 677 aa9.32□□□□□ -0.92
LSM1P2-201ENST00000604911 C11orf95C9JLR9 678 aaPredicted RBP9.31□□□□□ -0.92
LSM1P2-201ENST00000604911 ZMYND10O75800 440 aa9.31□□□□□ -0.92
LSM1P2-201ENST00000604911 FDX1P10109 184 aa9.31□□□□□ -0.92
LSM1P2-201ENST00000604911 SSTR3P32745 418 aaPredicted RBP9.31□□□□□ -0.92
LSM1P2-201ENST00000604911 PTCRAQ6ISU1 281 aaPredicted RBP9.31□□□□□ -0.92
LSM1P2-201ENST00000604911 AMHR2Q16671 573 aa9.3□□□□□ -0.92
LSM1P2-201ENST00000604911 KRI1Q8N9T8 703 aaKnown RBP9.3□□□□□ -0.92
LSM1P2-201ENST00000604911 SPIRE2Q8WWL2 714 aa9.3□□□□□ -0.92
LSM1P2-201ENST00000604911 HPS1Q92902 700 aa9.3□□□□□ -0.92
LSM1P2-201ENST00000604911 NUDT12Q9BQG2 462 aa9.3□□□□□ -0.92
LSM1P2-201ENST00000604911 ATP13A2Q9NQ11 1180 aa9.3□□□□□ -0.92
LSM1P2-201ENST00000604911 SIAH2O43255 324 aa9.28□□□□□ -0.92
LSM1P2-201ENST00000604911 MOXD2PA6NHM9 499 aa9.26□□□□□ -0.93
LSM1P2-201ENST00000604911 C6orf229H3BNL8 230 aa9.26□□□□□ -0.93
LSM1P2-201ENST00000604911 NDUFV2P19404 249 aa9.26□□□□□ -0.93
LSM1P2-201ENST00000604911 NFX1Q12986 1120 aaKnown RBP9.26□□□□□ -0.93
LSM1P2-201ENST00000604911 ZC3H15Q8WU90 426 aaKnown RBP9.26□□□□□ -0.93
LSM1P2-201ENST00000604911 CCNYL3P0C7X3 344 aa9.25□□□□□ -0.93
LSM1P2-201ENST00000604911 SNRPBP14678 240 aaKnown RBP9.25□□□□□ -0.93
LSM1P2-201ENST00000604911 TRIM47Q96LD4 638 aa9.25□□□□□ -0.93
LSM1P2-201ENST00000604911 WFS1O76024 890 aa9.24□□□□□ -0.93
LSM1P2-201ENST00000604911 MS4A1P11836 297 aa9.24□□□□□ -0.93
LSM1P2-201ENST00000604911 PTPRNQ16849 979 aa9.24□□□□□ -0.93
LSM1P2-201ENST00000604911 GIGYF2Q6Y7W6 1299 aaKnown RBP9.24□□□□□ -0.93
LSM1P2-201ENST00000604911 ALDH1A1P00352 501 aa9.23□□□□□ -0.93
LSM1P2-201ENST00000604911 SH3BP2P78314 561 aa9.23□□□□□ -0.93
LSM1P2-201ENST00000604911 TTLL12Q14166 644 aaPredicted RBP9.23□□□□□ -0.93
LSM1P2-201ENST00000604911 SENP2Q9HC62 589 aa9.23□□□□□ -0.93
LSM1P2-201ENST00000604911 EVA1BQ9NVM1 165 aa9.23□□□□□ -0.93
LSM1P2-201ENST00000604911 DESI1Q6ICB0 168 aa9.22□□□□□ -0.93
LSM1P2-201ENST00000604911 EHBP1Q8NDI1 1231 aa9.22□□□□□ -0.93
LSM1P2-201ENST00000604911 GJA5P36382 358 aa9.21□□□□□ -0.94
LSM1P2-201ENST00000604911 LCE2CQ5TA81 110 aa9.21□□□□□ -0.94
LSM1P2-201ENST00000604911 PRR7Q8TB68 274 aa9.21□□□□□ -0.94
LSM1P2-201ENST00000604911 UNC93B1Q9H1C4 597 aa9.21□□□□□ -0.94
LSM1P2-201ENST00000604911 SPDYE5A6NIY4 337 aa9.2□□□□□ -0.94
LSM1P2-201ENST00000604911 MTMR2Q13614 643 aa9.2□□□□□ -0.94
LSM1P2-201ENST00000604911 KIFC2Q96AC6 838 aa9.2□□□□□ -0.94
LSM1P2-201ENST00000604911 BEGAINQ9BUH8 593 aa9.2□□□□□ -0.94
LSM1P2-201ENST00000604911 WIPF1O43516 503 aa9.19□□□□□ -0.94
LSM1P2-201ENST00000604911 KCNH2Q12809 1159 aa9.19□□□□□ -0.94
LSM1P2-201ENST00000604911 PARP9Q8IXQ6 854 aa9.19□□□□□ -0.94
LSM1P2-201ENST00000604911 TBC1D2Q9BYX2 928 aa9.18□□□□□ -0.94
LSM1P2-201ENST00000604911 TERTO14746 1132 aaKnown RBP9.17□□□□□ -0.94
LSM1P2-201ENST00000604911 RSBN1LQ6PCB5 846 aaPredicted RBP9.17□□□□□ -0.94
LSM1P2-201ENST00000604911 BAP1Q92560 729 aa9.17□□□□□ -0.94
LSM1P2-201ENST00000604911 MPNDQ8N594 471 aa9.16□□□□□ -0.94
LSM1P2-201ENST00000604911 ZNF511Q8NB15 262 aa9.16□□□□□ -0.94
LSM1P2-201ENST00000604911 TRIM66O15016 1216 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms