RNA–Protein interactions for RNA: ENST00000604751.1

SNX30-203, Transcript of sorting nexin family member 30, humanhuman

TSL 2

Gene SNX30, Length 4,068 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30-203ENST00000604751 C14orf93Q9H972 538 aaKnown RBP10.78□□□□□ -0.68
SNX30-203ENST00000604751 SPG7Q9UQ90 795 aa10.78□□□□□ -0.68
SNX30-203ENST00000604751 C11orf95C9JLR9 678 aaPredicted RBP10.78□□□□□ -0.68
SNX30-203ENST00000604751 A2ML1A8K2U0 1454 aa10.78□□□□□ -0.68
SNX30-203ENST00000604751 DDB1Q16531 1140 aa10.78□□□□□ -0.68
SNX30-203ENST00000604751 COL17A1Q9UMD9 1497 aaPredicted RBP10.77□□□□□ -0.69
SNX30-203ENST00000604751 POLD1P28340 1107 aa10.77□□□□□ -0.69
SNX30-203ENST00000604751 GOLGA2Q08379 1002 aa10.77□□□□□ -0.69
SNX30-203ENST00000604751 PLEKHO1Q53GL0 409 aaPredicted RBP10.77□□□□□ -0.69
SNX30-203ENST00000604751 ORAI2Q96SN7 254 aa10.77□□□□□ -0.69
SNX30-203ENST00000604751 RBM42Q9BTD8 480 aaKnown RBP10.77□□□□□ -0.69
SNX30-203ENST00000604751 MRS2Q9HD23 443 aa10.77□□□□□ -0.69
SNX30-203ENST00000604751 SETD1BQ9UPS6 1966 aaKnown RBP10.77□□□□□ -0.69
SNX30-203ENST00000604751 CALD1Q05682 793 aaKnown RBP10.76□□□□□ -0.69
SNX30-203ENST00000604751 KTN1Q86UP2 1357 aaKnown RBP10.76□□□□□ -0.69
SNX30-203ENST00000604751 CABLES1Q8TDN4 633 aa10.76□□□□□ -0.69
SNX30-203ENST00000604751 GGNBP2Q9H3C7 697 aa10.76□□□□□ -0.69
SNX30-203ENST00000604751 BTG4Q9NY30 223 aa10.76□□□□□ -0.69
SNX30-203ENST00000604751 HSP90AB1P08238 724 aaKnown RBP10.75□□□□□ -0.69
SNX30-203ENST00000604751 HSPA5P11021 654 aaKnown RBP10.75□□□□□ -0.69
SNX30-203ENST00000604751 FAM9BQ8IZU0 186 aa10.75□□□□□ -0.69
SNX30-203ENST00000604751 ABCA9Q8IUA7 1624 aa10.75□□□□□ -0.69
SNX30-203ENST00000604751 JCADQ9P266 1359 aa10.75□□□□□ -0.69
SNX30-203ENST00000604751 TTC37Q6PGP7 1564 aa10.75□□□□□ -0.69
SNX30-203ENST00000604751 SHANK2Q9UPX8 1470 aa10.75□□□□□ -0.69
SNX30-203ENST00000604751 RBM6P78332 1123 aaKnown RBP10.75□□□□□ -0.69
SNX30-203ENST00000604751 KDM5DQ9BY66 1539 aa10.75□□□□□ -0.69
SNX30-203ENST00000604751 RPRD2Q5VT52 1461 aaKnown RBP10.75□□□□□ -0.69
SNX30-203ENST00000604751 LMOD3Q0VAK6 560 aa10.74□□□□□ -0.69
SNX30-203ENST00000604751 ABCC1P33527 1531 aa10.74□□□□□ -0.69
SNX30-203ENST00000604751 ARHGEF10O15013 1369 aa10.74□□□□□ -0.69
SNX30-203ENST00000604751 STK32BQ9NY57 414 aa10.74□□□□□ -0.69
SNX30-203ENST00000604751 CDCA7Q9BWT1 371 aaPredicted RBP10.74□□□□□ -0.69
SNX30-203ENST00000604751 NAIPQ13075 1403 aa10.73□□□□□ -0.69
SNX30-203ENST00000604751 NBPF1Q3BBV0 1214 aa10.73□□□□□ -0.69
SNX30-203ENST00000604751 PLEKHG1Q9ULL1 1385 aa10.72□□□□□ -0.69
SNX30-203ENST00000604751 SAMD9LQ8IVG5 1584 aa10.72□□□□□ -0.69
SNX30-203ENST00000604751 CENPBP07199 599 aaPredicted RBP10.72□□□□□ -0.69
SNX30-203ENST00000604751 FAM98CQ17RN3 349 aaKnown RBP10.72□□□□□ -0.69
SNX30-203ENST00000604751 PZPP20742 1482 aa10.72□□□□□ -0.69
SNX30-203ENST00000604751 EFCAB6Q5THR3 1501 aa10.71□□□□□ -0.69
SNX30-203ENST00000604751 PIK3R4Q99570 1358 aa10.71□□□□□ -0.69
SNX30-203ENST00000604751 ACEP12821 1306 aa10.71□□□□□ -0.69
SNX30-203ENST00000604751 SLC12A5Q9H2X9 1139 aa10.71□□□□□ -0.69
SNX30-203ENST00000604751 SPATA31A6Q5VVP1 1343 aa10.71□□□□□ -0.7
SNX30-203ENST00000604751 APBA3O96018 575 aa10.71□□□□□ -0.7
SNX30-203ENST00000604751 CABP4P57796 275 aa10.71□□□□□ -0.7
SNX30-203ENST00000604751 AFF2P51816 1311 aa10.71□□□□□ -0.7
SNX30-203ENST00000604751 PANK3Q9H999 370 aa10.7□□□□□ -0.7
SNX30-203ENST00000604751 DIAPH1O60610 1272 aaKnown RBP10.7□□□□□ -0.7
SNX30-203ENST00000604751 USP47Q96K76 1375 aa10.69□□□□□ -0.7
SNX30-203ENST00000604751 ARHGEF40Q8TER5 1519 aa10.69□□□□□ -0.7
SNX30-203ENST00000604751 DDX17Q92841 729 aaKnown RBP10.69□□□□□ -0.7
SNX30-203ENST00000604751 AK7Q96M32 723 aa10.69□□□□□ -0.7
SNX30-203ENST00000604751 STK31Q9BXU1 1019 aa10.69□□□□□ -0.7
SNX30-203ENST00000604751 ARHGEF12Q9NZN5 1544 aa10.68□□□□□ -0.7
SNX30-203ENST00000604751 ERVK-7P63135 1459 aa10.68□□□□□ -0.7
SNX30-203ENST00000604751 PTPRTO14522 1441 aa10.68□□□□□ -0.7
SNX30-203ENST00000604751 CFAP65Q6ZU64 1925 aaKnown RBP10.68□□□□□ -0.7
SNX30-203ENST00000604751 TMOD3Q9NYL9 352 aa10.68□□□□□ -0.7
SNX30-203ENST00000604751 MBD5Q9P267 1494 aa10.68□□□□□ -0.7
SNX30-203ENST00000604751 ZNF530Q6P9A1 599 aaPredicted RBP10.67□□□□□ -0.7
SNX30-203ENST00000604751 KRT27Q7Z3Y8 459 aa10.67□□□□□ -0.7
SNX30-203ENST00000604751 TAF7LQ5H9L4 462 aa10.67□□□□□ -0.7
SNX30-203ENST00000604751 AGLP35573 1532 aa10.67□□□□□ -0.7
SNX30-203ENST00000604751 RIMS1Q86UR5 1692 aaKnown RBP10.67□□□□□ -0.7
SNX30-203ENST00000604751 KAT6BQ8WYB5 2073 aa10.66□□□□□ -0.7
SNX30-203ENST00000604751 MYH16Q9H6N6 1097 aa10.66□□□□□ -0.7
SNX30-203ENST00000604751 TFCP2L1Q9NZI6 479 aa10.66□□□□□ -0.7
SNX30-203ENST00000604751 BRINP3Q76B58 766 aa10.66□□□□□ -0.7
SNX30-203ENST00000604751 TTC21AQ8NDW8 1320 aa10.66□□□□□ -0.7
SNX30-203ENST00000604751 GCP02774 474 aa10.66□□□□□ -0.7
SNX30-203ENST00000604751 DIEXFQ68CQ4 756 aaKnown RBP10.66□□□□□ -0.7
SNX30-203ENST00000604751 FAM196AQ6ZSG2 479 aa10.66□□□□□ -0.7
SNX30-203ENST00000604751 TCP11L2Q8N4U5 519 aa10.66□□□□□ -0.7
SNX30-203ENST00000604751 SMARCC1Q92922 1105 aaPredicted RBP10.66□□□□□ -0.7
SNX30-203ENST00000604751 MTHFSP49914 203 aa10.65□□□□□ -0.7
SNX30-203ENST00000604751 MPRIPQ6WCQ1 1025 aa10.65□□□□□ -0.7
SNX30-203ENST00000604751 NGEFQ8N5V2 710 aa10.65□□□□□ -0.7
SNX30-203ENST00000604751 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.64□□□□□ -0.71
SNX30-203ENST00000604751 GAS2L2Q8NHY3 880 aa10.64□□□□□ -0.71
SNX30-203ENST00000604751 ZPR1O75312 459 aa10.64□□□□□ -0.71
SNX30-203ENST00000604751 HSP90B1P14625 803 aaKnown RBP10.64□□□□□ -0.71
SNX30-203ENST00000604751 UNC5CLQ8IV45 518 aa10.64□□□□□ -0.71
SNX30-203ENST00000604751 HDAC5Q9UQL6 1122 aa10.64□□□□□ -0.71
SNX30-203ENST00000604751 TRPM2O94759 1503 aa10.64□□□□□ -0.71
SNX30-203ENST00000604751 CAMSAP1Q5T5Y3 1602 aa10.63□□□□□ -0.71
SNX30-203ENST00000604751 PREX2Q70Z35 1606 aa10.63□□□□□ -0.71
SNX30-203ENST00000604751 IL2RBP14784 551 aa10.63□□□□□ -0.71
SNX30-203ENST00000604751 ANKRD24Q8TF21 1146 aa10.63□□□□□ -0.71
SNX30-203ENST00000604751 C16orf71Q8IYS4 520 aaPredicted RBP10.63□□□□□ -0.71
SNX30-203ENST00000604751 ARHGEF5Q12774 1597 aa10.63□□□□□ -0.71
SNX30-203ENST00000604751 SEPT12Q8IYM1 358 aa10.62□□□□□ -0.71
SNX30-203ENST00000604751 ACSBG1Q96GR2 724 aa10.62□□□□□ -0.71
SNX30-203ENST00000604751 GPR162Q16538 588 aa10.62□□□□□ -0.71
SNX30-203ENST00000604751 SIRT1Q96EB6 747 aa10.62□□□□□ -0.71
SNX30-203ENST00000604751 FRAT2O75474 233 aaPredicted RBP10.62□□□□□ -0.71
SNX30-203ENST00000604751 TCOF1Q13428 1488 aaKnown RBP10.62□□□□□ -0.71
SNX30-203ENST00000604751 STARD3NLO95772 234 aa10.61□□□□□ -0.71
SNX30-203ENST00000604751 ZCRB1Q8TBF4 217 aaKnown RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms