RNA–Protein interactions for RNA: ENST00000604024.5

CEP290-208, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-208ENST00000604024 KRTAP17-1Q9BYP8 105 aa4.21□□□□□ -1.74
CEP290-208ENST00000604024 SEMA3EO15041 775 aa4.21□□□□□ -1.74
CEP290-208ENST00000604024 TULP1O00294 542 aaPredicted RBP4.2□□□□□ -1.74
CEP290-208ENST00000604024 CD46P15529 392 aa4.2□□□□□ -1.74
CEP290-208ENST00000604024 WNT7BP56706 349 aa4.2□□□□□ -1.74
CEP290-208ENST00000604024 PLA2G2CQ5R387 149 aa4.2□□□□□ -1.74
CEP290-208ENST00000604024 WIPF1O43516 503 aa4.19□□□□□ -1.74
CEP290-208ENST00000604024 DXOO77932 396 aaKnown RBP4.19□□□□□ -1.74
CEP290-208ENST00000604024 INSM1Q01101 510 aaPredicted RBP4.19□□□□□ -1.74
CEP290-208ENST00000604024 MINK1Q8N4C8 1332 aaPredicted RBP4.19□□□□□ -1.74
CEP290-208ENST00000604024 LCE2AQ5TA79 106 aaPredicted RBP4.19□□□□□ -1.74
CEP290-208ENST00000604024 SLC27A5Q9Y2P5 690 aa4.19□□□□□ -1.74
CEP290-208ENST00000604024 AXIN1O15169 862 aa4.18□□□□□ -1.74
CEP290-208ENST00000604024 MAP2K5Q13163 448 aa4.18□□□□□ -1.74
CEP290-208ENST00000604024 GPIHBP1Q8IV16 184 aa4.18□□□□□ -1.74
CEP290-208ENST00000604024 IGSF5Q9NSI5 407 aa4.18□□□□□ -1.74
CEP290-208ENST00000604024 DDX11L8A8MPP1 907 aa4.18□□□□□ -1.74
CEP290-208ENST00000604024 NPAS3Q8IXF0 933 aa4.18□□□□□ -1.74
CEP290-208ENST00000604024 MPNDQ8N594 471 aa4.18□□□□□ -1.74
CEP290-208ENST00000604024 FCF1Q9Y324 198 aaKnown RBP4.17□□□□□ -1.74
CEP290-208ENST00000604024 PLCB2Q00722 1185 aa4.17□□□□□ -1.74
CEP290-208ENST00000604024 FUT2Q10981 343 aa4.17□□□□□ -1.74
CEP290-208ENST00000604024 RBM26Q5T8P6 1007 aaKnown RBP4.17□□□□□ -1.74
CEP290-208ENST00000604024 FAM181BA6NEQ2 426 aa4.16□□□□□ -1.74
CEP290-208ENST00000604024 JUNDP17535 347 aa4.16□□□□□ -1.74
CEP290-208ENST00000604024 USB1Q9BQ65 265 aaKnown RBP4.16□□□□□ -1.74
CEP290-208ENST00000604024 KRTAP4-7Q9BYR0 210 aa4.16□□□□□ -1.74
CEP290-208ENST00000604024 TTC24A2A3L6 582 aaPredicted RBP4.16□□□□□ -1.74
CEP290-208ENST00000604024 FOXC1Q12948 553 aa4.16□□□□□ -1.74
CEP290-208ENST00000604024 FAM161AQ3B820 660 aa4.16□□□□□ -1.74
CEP290-208ENST00000604024 PUS10Q3MIT2 529 aaKnown RBP4.16□□□□□ -1.74
CEP290-208ENST00000604024 WFS1O76024 890 aa4.15□□□□□ -1.74
CEP290-208ENST00000604024 SMPD1P17405 629 aa4.15□□□□□ -1.74
CEP290-208ENST00000604024 TNFRSF10AO00220 468 aa4.15□□□□□ -1.75
CEP290-208ENST00000604024 KDM4AO75164 1064 aa4.15□□□□□ -1.75
CEP290-208ENST00000604024 GJA5P36382 358 aa4.15□□□□□ -1.75
CEP290-208ENST00000604024 IRF6O14896 467 aa4.15□□□□□ -1.75
CEP290-208ENST00000604024 CLCN1P35523 988 aa4.14□□□□□ -1.75
CEP290-208ENST00000604024 LCE3BQ5TA77 95 aa4.14□□□□□ -1.75
CEP290-208ENST00000604024 TRIM47Q96LD4 638 aa4.14□□□□□ -1.75
CEP290-208ENST00000604024 FECHP22830 423 aa4.14□□□□□ -1.75
CEP290-208ENST00000604024 TRIM32Q13049 653 aa4.14□□□□□ -1.75
CEP290-208ENST00000604024 VSIG10Q8N0Z9 540 aa4.14□□□□□ -1.75
CEP290-208ENST00000604024 ATP13A2Q9NQ11 1180 aa4.13□□□□□ -1.75
CEP290-208ENST00000604024 C11orf95C9JLR9 678 aaPredicted RBP4.13□□□□□ -1.75
CEP290-208ENST00000604024 TERTO14746 1132 aaKnown RBP4.12□□□□□ -1.75
CEP290-208ENST00000604024 ST8SIA5O15466 376 aa4.12□□□□□ -1.75
CEP290-208ENST00000604024 RETREG3Q86VR2 466 aa4.12□□□□□ -1.75
CEP290-208ENST00000604024 SLC16A10Q8TF71 515 aa4.12□□□□□ -1.75
CEP290-208ENST00000604024 GMPR2Q9P2T1 348 aaKnown RBP4.12□□□□□ -1.75
CEP290-208ENST00000604024 POTECB2RU33 542 aa4.12□□□□□ -1.75
CEP290-208ENST00000604024 HOXA2O43364 376 aa4.12□□□□□ -1.75
CEP290-208ENST00000604024 DIXDC1Q155Q3 683 aa4.12□□□□□ -1.75
CEP290-208ENST00000604024 RC3H1Q5TC82 1133 aaKnown RBP4.12□□□□□ -1.75
CEP290-208ENST00000604024 DESI1Q6ICB0 168 aa4.12□□□□□ -1.75
CEP290-208ENST00000604024 RNF19BQ6ZMZ0 732 aa4.12□□□□□ -1.75
CEP290-208ENST00000604024 SPDYE5A6NIY4 337 aa4.11□□□□□ -1.75
CEP290-208ENST00000604024 NFX1Q12986 1120 aaKnown RBP4.11□□□□□ -1.75
CEP290-208ENST00000604024 PHOX2BQ99453 314 aa4.11□□□□□ -1.75
CEP290-208ENST00000604024 GPCPD1Q9NPB8 672 aa4.11□□□□□ -1.75
CEP290-208ENST00000604024 FAM217BQ9NTX9 383 aaPredicted RBP4.11□□□□□ -1.75
CEP290-208ENST00000604024 NUTM1Q86Y26 1132 aa4.1□□□□□ -1.75
CEP290-208ENST00000604024 SIAH2O43255 324 aa4.1□□□□□ -1.75
CEP290-208ENST00000604024 MRGPRX2Q96LB1 330 aa4.1□□□□□ -1.75
CEP290-208ENST00000604024 PLEKHG3A1L390 1219 aa4.09□□□□□ -1.75
CEP290-208ENST00000604024 PTPRNQ16849 979 aa4.09□□□□□ -1.75
CEP290-208ENST00000604024 TUSC1Q2TAM9 212 aa4.09□□□□□ -1.75
CEP290-208ENST00000604024 PRDM9Q9NQV7 894 aa4.09□□□□□ -1.75
CEP290-208ENST00000604024 VARSP26640 1264 aaKnown RBP4.08□□□□□ -1.76
CEP290-208ENST00000604024 SKOR1P84550 965 aa4.08□□□□□ -1.76
CEP290-208ENST00000604024 DACH1Q9UI36 760 aa4.08□□□□□ -1.76
CEP290-208ENST00000604024 CCNYL3P0C7X3 344 aa4.07□□□□□ -1.76
CEP290-208ENST00000604024 MDM2Q00987 491 aaPredicted RBP4.07□□□□□ -1.76
CEP290-208ENST00000604024 KCNH2Q12809 1159 aa4.07□□□□□ -1.76
CEP290-208ENST00000604024 EVA1BQ9NVM1 165 aa4.07□□□□□ -1.76
CEP290-208ENST00000604024 HPS1Q92902 700 aa4.07□□□□□ -1.76
CEP290-208ENST00000604024 NUDT12Q9BQG2 462 aa4.07□□□□□ -1.76
CEP290-208ENST00000604024 J3QL48 77 aa4.06□□□□□ -1.76
CEP290-208ENST00000604024 FDX1P10109 184 aa4.06□□□□□ -1.76
CEP290-208ENST00000604024 MS4A1P11836 297 aa4.06□□□□□ -1.76
CEP290-208ENST00000604024 AMHR2Q16671 573 aa4.06□□□□□ -1.76
CEP290-208ENST00000604024 CCDC102AQ96A19 550 aa4.06□□□□□ -1.76
CEP290-208ENST00000604024 CCDC24Q8N4L8 307 aa4.06□□□□□ -1.76
CEP290-208ENST00000604024 NXF1Q9UBU9 619 aaKnown RBP4.06□□□□□ -1.76
CEP290-208ENST00000604024 WASF2Q9Y6W5 498 aa4.06□□□□□ -1.76
CEP290-208ENST00000604024 PRPF38BQ5VTL8 546 aaKnown RBP4.05□□□□□ -1.76
CEP290-208ENST00000604024 KRTAP5-3Q6L8H2 238 aa4.05□□□□□ -1.76
CEP290-208ENST00000604024 BARGINQ6ZT62 677 aa4.05□□□□□ -1.76
CEP290-208ENST00000604024 FAM174AQ8TBP5 190 aa4.05□□□□□ -1.76
CEP290-208ENST00000604024 IRF7Q92985 503 aa4.05□□□□□ -1.76
CEP290-208ENST00000604024 KRTAP9-8Q9BYQ0 159 aa4.05□□□□□ -1.76
CEP290-208ENST00000604024 H3BM21 787 aa4.05□□□□□ -1.76
CEP290-208ENST00000604024 SNRPBP14678 240 aaKnown RBP4.05□□□□□ -1.76
CEP290-208ENST00000604024 ARMC2Q8NEN0 867 aa4.05□□□□□ -1.76
CEP290-208ENST00000604024 KRI1Q8N9T8 703 aaKnown RBP4.04□□□□□ -1.76
CEP290-208ENST00000604024 EHBP1Q8NDI1 1231 aa4.04□□□□□ -1.76
CEP290-208ENST00000604024 SPIRE2Q8WWL2 714 aa4.04□□□□□ -1.76
CEP290-208ENST00000604024 CDK15Q96Q40 435 aa4.04□□□□□ -1.76
CEP290-208ENST00000604024 CAPN5O15484 640 aaPredicted RBP4.04□□□□□ -1.76
CEP290-208ENST00000604024 VSIG8P0DPA2 414 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms