RNA–Protein interactions for RNA: ENST00000603946.5

NOLC1-208, Transcript of nucleolar and coiled-body phosphoprotein 1, humanhuman

TSL 1 (best)

Gene NOLC1, Length 3,217 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOLC1-208ENST00000603946 IQGAP1P46940 1657 aa11.26□□□□□ -0.61
NOLC1-208ENST00000603946 PAK3O75914 559 aaPredicted RBP11.26□□□□□ -0.61
NOLC1-208ENST00000603946 MYT1Q01538 1121 aa11.26□□□□□ -0.61
NOLC1-208ENST00000603946 MIER1Q8N108 512 aa11.26□□□□□ -0.61
NOLC1-208ENST00000603946 ARHGAP23Q9P227 1491 aa11.26□□□□□ -0.61
NOLC1-208ENST00000603946 STAC3Q96MF2 364 aa11.25□□□□□ -0.61
NOLC1-208ENST00000603946 TRPM1Q7Z4N2 1603 aa11.25□□□□□ -0.61
NOLC1-208ENST00000603946 MYOM2P54296 1465 aa11.25□□□□□ -0.61
NOLC1-208ENST00000603946 TMEM94Q12767 1356 aa11.25□□□□□ -0.61
NOLC1-208ENST00000603946 ZRANB1Q9UGI0 708 aa11.24□□□□□ -0.61
NOLC1-208ENST00000603946 NUDT16Q96DE0 195 aaKnown RBP11.24□□□□□ -0.61
NOLC1-208ENST00000603946 SLIT1O75093 1534 aa11.24□□□□□ -0.61
NOLC1-208ENST00000603946 LRPPRCP42704 1394 aaKnown RBP11.23□□□□□ -0.61
NOLC1-208ENST00000603946 ZBTB7CA1YPR0 619 aa11.23□□□□□ -0.61
NOLC1-208ENST00000603946 WASLO00401 505 aaPredicted RBP11.23□□□□□ -0.61
NOLC1-208ENST00000603946 AMER1Q5JTC6 1135 aaPredicted RBP11.23□□□□□ -0.61
NOLC1-208ENST00000603946 ERICH6Q7L0X2 663 aa11.23□□□□□ -0.61
NOLC1-208ENST00000603946 ADGRB1O14514 1584 aa11.23□□□□□ -0.61
NOLC1-208ENST00000603946 PRR36Q9H6K5 1346 aa11.23□□□□□ -0.61
NOLC1-208ENST00000603946 NRXN1Q9ULB1 1477 aa11.23□□□□□ -0.61
NOLC1-208ENST00000603946 NRXN3Q9Y4C0 1643 aa11.23□□□□□ -0.61
NOLC1-208ENST00000603946 PELP1Q8IZL8 1130 aaKnown RBP11.22□□□□□ -0.61
NOLC1-208ENST00000603946 EVC2Q86UK5 1308 aa11.22□□□□□ -0.61
NOLC1-208ENST00000603946 CCDC7Q96M83 1385 aa11.22□□□□□ -0.61
NOLC1-208ENST00000603946 ATF3P18847 181 aa11.22□□□□□ -0.61
NOLC1-208ENST00000603946 NGDNQ8NEJ9 315 aaKnown RBP11.22□□□□□ -0.61
NOLC1-208ENST00000603946 IFT172Q9UG01 1749 aa11.22□□□□□ -0.61
NOLC1-208ENST00000603946 GPRASP1Q5JY77 1395 aa11.21□□□□□ -0.61
NOLC1-208ENST00000603946 YTHDC1Q96MU7 727 aaKnown RBP11.21□□□□□ -0.61
NOLC1-208ENST00000603946 NEURL4Q96JN8 1562 aa11.21□□□□□ -0.61
NOLC1-208ENST00000603946 ABCC11Q96J66 1382 aa11.21□□□□□ -0.61
NOLC1-208ENST00000603946 CARD14Q9BXL6 1004 aa11.2□□□□□ -0.62
NOLC1-208ENST00000603946 GGNBP2Q9H3C7 697 aa11.2□□□□□ -0.62
NOLC1-208ENST00000603946 EIF3AQ14152 1382 aaKnown RBP11.2□□□□□ -0.62
NOLC1-208ENST00000603946 STRCQ7RTU9 1775 aa11.2□□□□□ -0.62
NOLC1-208ENST00000603946 PPM1GO15355 546 aaPredicted RBP11.2□□□□□ -0.62
NOLC1-208ENST00000603946 DMRT2Q9Y5R5 561 aa11.19□□□□□ -0.62
NOLC1-208ENST00000603946 CCDC184Q52MB2 194 aa11.18□□□□□ -0.62
NOLC1-208ENST00000603946 C19orf44Q9H6X5 657 aa11.18□□□□□ -0.62
NOLC1-208ENST00000603946 CABLES1Q8TDN4 633 aa11.18□□□□□ -0.62
NOLC1-208ENST00000603946 MED14O60244 1454 aa11.17□□□□□ -0.62
NOLC1-208ENST00000603946 ACEP12821 1306 aa11.17□□□□□ -0.62
NOLC1-208ENST00000603946 UBAP1LF5GYI3 381 aa11.17□□□□□ -0.62
NOLC1-208ENST00000603946 CCDC61Q9Y6R9 512 aa11.17□□□□□ -0.62
NOLC1-208ENST00000603946 PSME1Q06323 249 aa11.16□□□□□ -0.62
NOLC1-208ENST00000603946 NME9Q86XW9 330 aa11.16□□□□□ -0.62
NOLC1-208ENST00000603946 KNSTRNQ9Y448 316 aa11.16□□□□□ -0.62
NOLC1-208ENST00000603946 SETBP1Q9Y6X0 1596 aa11.15□□□□□ -0.62
NOLC1-208ENST00000603946 SLAIN2Q9P270 581 aa11.15□□□□□ -0.62
NOLC1-208ENST00000603946 ZNF142P52746 1687 aaPredicted RBP11.15□□□□□ -0.63
NOLC1-208ENST00000603946 PHF8Q9UPP1 1060 aa11.14□□□□□ -0.63
NOLC1-208ENST00000603946 STRCP1A6NGW2 1772 aa11.13□□□□□ -0.63
NOLC1-208ENST00000603946 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.12□□□□□ -0.63
NOLC1-208ENST00000603946 PPIP5K1Q6PFW1 1433 aa11.12□□□□□ -0.63
NOLC1-208ENST00000603946 ANP32CO43423 234 aa11.12□□□□□ -0.63
NOLC1-208ENST00000603946 CDCA8Q53HL2 280 aa11.12□□□□□ -0.63
NOLC1-208ENST00000603946 SALL2Q9Y467 1007 aaPredicted RBP11.12□□□□□ -0.63
NOLC1-208ENST00000603946 TULP4Q9NRJ4 1543 aa11.12□□□□□ -0.63
NOLC1-208ENST00000603946 ABTB2Q8N961 1025 aa11.12□□□□□ -0.63
NOLC1-208ENST00000603946 MSH6P52701 1360 aa11.12□□□□□ -0.63
NOLC1-208ENST00000603946 SETD1AO15047 1707 aaKnown RBP11.11□□□□□ -0.63
NOLC1-208ENST00000603946 POLR1AO95602 1720 aaPredicted RBP11.11□□□□□ -0.63
NOLC1-208ENST00000603946 TULP1O00294 542 aaPredicted RBP11.11□□□□□ -0.63
NOLC1-208ENST00000603946 PER1O15534 1290 aaPredicted RBP11.11□□□□□ -0.63
NOLC1-208ENST00000603946 RRS1Q15050 365 aaKnown RBP11.11□□□□□ -0.63
NOLC1-208ENST00000603946 HDGFL2Q7Z4V5 671 aaPredicted RBP11.11□□□□□ -0.63
NOLC1-208ENST00000603946 A0A1W2PP64 1363 aa11.11□□□□□ -0.63
NOLC1-208ENST00000603946 ARHGEF28Q8N1W1 1705 aaKnown RBP11.11□□□□□ -0.63
NOLC1-208ENST00000603946 CADPS2Q86UW7 1296 aa11.11□□□□□ -0.63
NOLC1-208ENST00000603946 QRICH2Q9H0J4 1663 aa11.1□□□□□ -0.63
NOLC1-208ENST00000603946 NLRP6P59044 892 aa11.1□□□□□ -0.63
NOLC1-208ENST00000603946 BRINP3Q76B58 766 aa11.1□□□□□ -0.63
NOLC1-208ENST00000603946 FAM9BQ8IZU0 186 aa11.1□□□□□ -0.63
NOLC1-208ENST00000603946 NUTM2BA6NNL0 878 aaPredicted RBP11.1□□□□□ -0.63
NOLC1-208ENST00000603946 NUTM2EB1AL46 878 aaPredicted RBP11.1□□□□□ -0.63
NOLC1-208ENST00000603946 NUTM2AQ8IVF1 878 aaPredicted RBP11.1□□□□□ -0.63
NOLC1-208ENST00000603946 KTN1Q86UP2 1357 aaKnown RBP11.1□□□□□ -0.63
NOLC1-208ENST00000603946 ZC3H6P61129 1189 aaKnown RBP11.09□□□□□ -0.63
NOLC1-208ENST00000603946 KRT28Q7Z3Y7 464 aa11.09□□□□□ -0.63
NOLC1-208ENST00000603946 TERF2IPQ9NYB0 399 aa11.09□□□□□ -0.63
NOLC1-208ENST00000603946 FYB1O15117 783 aa11.09□□□□□ -0.63
NOLC1-208ENST00000603946 LTV1Q96GA3 475 aaPredicted RBP11.09□□□□□ -0.63
NOLC1-208ENST00000603946 NSD3Q9BZ95 1437 aa11.09□□□□□ -0.63
NOLC1-208ENST00000603946 LRRC7Q96NW7 1537 aa11.09□□□□□ -0.63
NOLC1-208ENST00000603946 MORC1Q86VD1 984 aa11.08□□□□□ -0.64
NOLC1-208ENST00000603946 RGPD8O14715 1765 aaPredicted RBP11.08□□□□□ -0.64
NOLC1-208ENST00000603946 CERKQ8TCT0 537 aa11.08□□□□□ -0.64
NOLC1-208ENST00000603946 KDM5AP29375 1690 aaKnown RBP11.08□□□□□ -0.64
NOLC1-208ENST00000603946 CHD2O14647 1828 aaKnown RBP11.08□□□□□ -0.64
NOLC1-208ENST00000603946 PIK3R4Q99570 1358 aa11.07□□□□□ -0.64
NOLC1-208ENST00000603946 FAM135BQ49AJ0 1406 aa11.07□□□□□ -0.64
NOLC1-208ENST00000603946 HAP1P54257 671 aaPredicted RBP11.07□□□□□ -0.64
NOLC1-208ENST00000603946 SIRT1Q96EB6 747 aa11.07□□□□□ -0.64
NOLC1-208ENST00000603946 PRKRIP1Q9H875 184 aaPredicted RBP11.07□□□□□ -0.64
NOLC1-208ENST00000603946 CHRNA2Q15822 529 aa11.06□□□□□ -0.64
NOLC1-208ENST00000603946 ADAMTS2O95450 1211 aa11.06□□□□□ -0.64
NOLC1-208ENST00000603946 TECPR2O15040 1411 aa11.06□□□□□ -0.64
NOLC1-208ENST00000603946 ADGRL3Q9HAR2 1447 aa11.05□□□□□ -0.64
NOLC1-208ENST00000603946 SRCAPQ6ZRS2 3230 aa11.05□□□□□ -0.64
NOLC1-208ENST00000603946 MRS2Q9HD23 443 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms