RNA–Protein interactions for RNA: ENST00000600442.5

ZNF548-210, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 535 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-210ENST00000600442 POLR3GLQ9BT43 218 aa17.61■□□□□ 0.41
ZNF548-210ENST00000600442 TBX22Q9Y458 520 aa17.61■□□□□ 0.41
ZNF548-210ENST00000600442 KIF7Q2M1P5 1343 aa17.61■□□□□ 0.41
ZNF548-210ENST00000600442 COL16A1Q07092 1604 aaPredicted RBP17.6■□□□□ 0.41
ZNF548-210ENST00000600442 C14orf37Q86TY3 774 aa17.58■□□□□ 0.4
ZNF548-210ENST00000600442 CENPJQ9HC77 1338 aaPredicted RBP17.57■□□□□ 0.4
ZNF548-210ENST00000600442 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.57■□□□□ 0.4
ZNF548-210ENST00000600442 NCOA3Q9Y6Q9 1424 aa17.56■□□□□ 0.4
ZNF548-210ENST00000600442 TRAK1Q9UPV9 953 aa17.56■□□□□ 0.4
ZNF548-210ENST00000600442 TMEM132EQ6IEE7 984 aa17.55■□□□□ 0.4
ZNF548-210ENST00000600442 TESK2Q96S53 571 aa17.55■□□□□ 0.4
ZNF548-210ENST00000600442 LRP6O75581 1613 aa17.54■□□□□ 0.4
ZNF548-210ENST00000600442 SPATA31A6Q5VVP1 1343 aa17.54■□□□□ 0.4
ZNF548-210ENST00000600442 C11orf95C9JLR9 678 aaPredicted RBP17.54■□□□□ 0.4
ZNF548-210ENST00000600442 C19orf44Q9H6X5 657 aa17.54■□□□□ 0.4
ZNF548-210ENST00000600442 ADAMTS13Q76LX8 1427 aa17.54■□□□□ 0.4
ZNF548-210ENST00000600442 SBNO2Q9Y2G9 1366 aa17.53■□□□□ 0.4
ZNF548-210ENST00000600442 ATF3P18847 181 aa17.53■□□□□ 0.4
ZNF548-210ENST00000600442 MEX3CQ5U5Q3 659 aaKnown RBP17.53■□□□□ 0.4
ZNF548-210ENST00000600442 CADPS2Q86UW7 1296 aa17.53■□□□□ 0.4
ZNF548-210ENST00000600442 MIER1Q8N108 512 aa17.53■□□□□ 0.4
ZNF548-210ENST00000600442 POGKQ9P215 609 aa17.53■□□□□ 0.4
ZNF548-210ENST00000600442 ZNF772Q68DY9 489 aaPredicted RBP17.52■□□□□ 0.4
ZNF548-210ENST00000600442 SHPRHQ149N8 1683 aa17.52■□□□□ 0.39
ZNF548-210ENST00000600442 ADGRB1O14514 1584 aa17.51■□□□□ 0.39
ZNF548-210ENST00000600442 STK26Q9P289 416 aa17.51■□□□□ 0.39
ZNF548-210ENST00000600442 AHDC1Q5TGY3 1603 aaPredicted RBP17.5■□□□□ 0.39
ZNF548-210ENST00000600442 PIK3R4Q99570 1358 aa17.5■□□□□ 0.39
ZNF548-210ENST00000600442 EVC2Q86UK5 1308 aa17.49■□□□□ 0.39
ZNF548-210ENST00000600442 DIP2AQ14689 1571 aa17.49■□□□□ 0.39
ZNF548-210ENST00000600442 YTHDC2Q9H6S0 1430 aaKnown RBP17.49■□□□□ 0.39
ZNF548-210ENST00000600442 UPF1Q92900 1129 aaKnown RBP eCLIP17.49■□□□□ 0.39
ZNF548-210ENST00000600442 PUS7Q96PZ0 661 aaKnown RBP17.49■□□□□ 0.39
ZNF548-210ENST00000600442 AMOTL2Q9Y2J4 779 aa17.49■□□□□ 0.39
ZNF548-210ENST00000600442 SIRT1Q96EB6 747 aa17.48■□□□□ 0.39
ZNF548-210ENST00000600442 LRPPRCP42704 1394 aaKnown RBP17.48■□□□□ 0.39
ZNF548-210ENST00000600442 ABCC11Q96J66 1382 aa17.47■□□□□ 0.39
ZNF548-210ENST00000600442 BRINP3Q76B58 766 aa17.46■□□□□ 0.39
ZNF548-210ENST00000600442 PTPRUQ92729 1446 aa17.46■□□□□ 0.39
ZNF548-210ENST00000600442 NUTM2BA6NNL0 878 aaPredicted RBP17.45■□□□□ 0.38
ZNF548-210ENST00000600442 NUTM2EB1AL46 878 aaPredicted RBP17.45■□□□□ 0.38
ZNF548-210ENST00000600442 RXRBP28702 533 aa17.45■□□□□ 0.38
ZNF548-210ENST00000600442 NUTM2AQ8IVF1 878 aaPredicted RBP17.45■□□□□ 0.38
ZNF548-210ENST00000600442 PRAM1Q96QH2 718 aa17.45■□□□□ 0.38
ZNF548-210ENST00000600442 CCER2I3L3R5 266 aa17.43■□□□□ 0.38
ZNF548-210ENST00000600442 KTN1Q86UP2 1357 aaKnown RBP17.42■□□□□ 0.38
ZNF548-210ENST00000600442 DLC1Q96QB1 1528 aa17.42■□□□□ 0.38
ZNF548-210ENST00000600442 NRXN3Q9Y4C0 1643 aa17.41■□□□□ 0.38
ZNF548-210ENST00000600442 XRN1Q8IZH2 1706 aaKnown RBP17.4■□□□□ 0.38
ZNF548-210ENST00000600442 METP08581 1390 aa17.4■□□□□ 0.38
ZNF548-210ENST00000600442 NHSL1Q5SYE7 1610 aa17.39■□□□□ 0.38
ZNF548-210ENST00000600442 DCCP43146 1447 aa17.39■□□□□ 0.38
ZNF548-210ENST00000600442 ASXL1Q8IXJ9 1541 aa17.39■□□□□ 0.37
ZNF548-210ENST00000600442 KNSTRNQ9Y448 316 aa17.39■□□□□ 0.37
ZNF548-210ENST00000600442 AFF2P51816 1311 aa17.39■□□□□ 0.37
ZNF548-210ENST00000600442 NINLQ9Y2I6 1382 aa17.39■□□□□ 0.37
ZNF548-210ENST00000600442 SRPK2P78362 688 aaKnown RBP17.38■□□□□ 0.37
ZNF548-210ENST00000600442 SAFB2Q14151 953 aaKnown RBP eCLIP17.38■□□□□ 0.37
ZNF548-210ENST00000600442 PANK3Q9H999 370 aa17.38■□□□□ 0.37
ZNF548-210ENST00000600442 MST1RQ04912 1400 aa17.38■□□□□ 0.37
ZNF548-210ENST00000600442 CDK12Q9NYV4 1490 aaPredicted RBP17.37■□□□□ 0.37
ZNF548-210ENST00000600442 RALBP1Q15311 655 aa17.37■□□□□ 0.37
ZNF548-210ENST00000600442 LRRC59Q96AG4 307 aaKnown RBP17.37■□□□□ 0.37
ZNF548-210ENST00000600442 ATAD2Q6PL18 1390 aa17.37■□□□□ 0.37
ZNF548-210ENST00000600442 TECPR2O15040 1411 aa17.37■□□□□ 0.37
ZNF548-210ENST00000600442 TMC1Q8TDI8 760 aa17.36■□□□□ 0.37
ZNF548-210ENST00000600442 QRICH2Q9H0J4 1663 aa17.36■□□□□ 0.37
ZNF548-210ENST00000600442 DDX17Q92841 729 aaKnown RBP17.35■□□□□ 0.37
ZNF548-210ENST00000600442 PRKRIP1Q9H875 184 aaPredicted RBP17.35■□□□□ 0.37
ZNF548-210ENST00000600442 MINK1Q8N4C8 1332 aaPredicted RBP17.35■□□□□ 0.37
ZNF548-210ENST00000600442 ARHGEF28Q8N1W1 1705 aaKnown RBP17.33■□□□□ 0.37
ZNF548-210ENST00000600442 C8orf37Q96NL8 207 aa17.33■□□□□ 0.36
ZNF548-210ENST00000600442 QTRT2Q9H974 415 aaKnown RBP17.33■□□□□ 0.36
ZNF548-210ENST00000600442 TERF2IPQ9NYB0 399 aa17.33■□□□□ 0.36
ZNF548-210ENST00000600442 WAPLQ7Z5K2 1190 aa17.32■□□□□ 0.36
ZNF548-210ENST00000600442 NALCNQ8IZF0 1738 aa17.32■□□□□ 0.36
ZNF548-210ENST00000600442 RBM6P78332 1123 aaKnown RBP17.31■□□□□ 0.36
ZNF548-210ENST00000600442 CDK19Q9BWU1 502 aa17.31■□□□□ 0.36
ZNF548-210ENST00000600442 ADGRL3Q9HAR2 1447 aa17.3■□□□□ 0.36
ZNF548-210ENST00000600442 PNPLA6Q8IY17 1366 aa17.3■□□□□ 0.36
ZNF548-210ENST00000600442 WASLO00401 505 aaPredicted RBP17.29■□□□□ 0.36
ZNF548-210ENST00000600442 HDGFL2Q7Z4V5 671 aaPredicted RBP17.29■□□□□ 0.36
ZNF548-210ENST00000600442 CABP2Q9NPB3 220 aa17.29■□□□□ 0.36
ZNF548-210ENST00000600442 RGS12O14924 1447 aa17.29■□□□□ 0.36
ZNF548-210ENST00000600442 PTCH1Q13635 1447 aa17.29■□□□□ 0.36
ZNF548-210ENST00000600442 KNDC1Q76NI1 1749 aa17.28■□□□□ 0.36
ZNF548-210ENST00000600442 PER1O15534 1290 aaPredicted RBP17.28■□□□□ 0.36
ZNF548-210ENST00000600442 ADAMTS2O95450 1211 aa17.28■□□□□ 0.36
ZNF548-210ENST00000600442 CENPBP07199 599 aaPredicted RBP17.28■□□□□ 0.36
ZNF548-210ENST00000600442 NGLY1Q96IV0 654 aa17.28■□□□□ 0.36
ZNF548-210ENST00000600442 ROBO2Q9HCK4 1378 aa17.27■□□□□ 0.35
ZNF548-210ENST00000600442 NPC1L1Q9UHC9 1359 aa17.27■□□□□ 0.35
ZNF548-210ENST00000600442 C1orf167Q5SNV9 1468 aa17.25■□□□□ 0.35
ZNF548-210ENST00000600442 MYBBP1AQ9BQG0 1328 aaKnown RBP17.25■□□□□ 0.35
ZNF548-210ENST00000600442 CNGB1Q14028 1251 aaPredicted RBP17.25■□□□□ 0.35
ZNF548-210ENST00000600442 SLC12A5Q9H2X9 1139 aa17.25■□□□□ 0.35
ZNF548-210ENST00000600442 TULP4Q9NRJ4 1543 aa17.25■□□□□ 0.35
ZNF548-210ENST00000600442 ANKRD36BQ8N2N9 1353 aa17.25■□□□□ 0.35
ZNF548-210ENST00000600442 SRCAPQ6ZRS2 3230 aa17.25■□□□□ 0.35
ZNF548-210ENST00000600442 CGNL1Q0VF96 1302 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms