RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 AMOTL2Q9Y2J4 779 aa27.13■■□□□ 1.93
CCDC9-205ENST00000600117 NHSL1Q5SYE7 1610 aa27.12■■□□□ 1.93
CCDC9-205ENST00000600117 TIMELESSQ9UNS1 1208 aa27.12■■□□□ 1.93
CCDC9-205ENST00000600117 PRAG1Q86YV5 1406 aa27.12■■□□□ 1.93
CCDC9-205ENST00000600117 PTPRUQ92729 1446 aa27.12■■□□□ 1.93
CCDC9-205ENST00000600117 RGS12O14924 1447 aa27.08■■□□□ 1.93
CCDC9-205ENST00000600117 LRRC59Q96AG4 307 aaKnown RBP27.08■■□□□ 1.93
CCDC9-205ENST00000600117 MST1RQ04912 1400 aa27.07■■□□□ 1.92
CCDC9-205ENST00000600117 RBM6P78332 1123 aaKnown RBP27.07■■□□□ 1.92
CCDC9-205ENST00000600117 C14orf93Q9H972 538 aaKnown RBP27.07■■□□□ 1.92
CCDC9-205ENST00000600117 LAMC1P11047 1609 aa27.07■■□□□ 1.92
CCDC9-205ENST00000600117 XRN1Q8IZH2 1706 aaKnown RBP27.07■■□□□ 1.92
CCDC9-205ENST00000600117 CFAP70Q5T0N1 1121 aa27.05■■□□□ 1.92
CCDC9-205ENST00000600117 QTRT2Q9H974 415 aaKnown RBP27.05■■□□□ 1.92
CCDC9-205ENST00000600117 METP08581 1390 aa27.05■■□□□ 1.92
CCDC9-205ENST00000600117 NBPF8Q3BBV2 869 aa27.04■■□□□ 1.92
CCDC9-205ENST00000600117 C8orf37Q96NL8 207 aa27.04■■□□□ 1.92
CCDC9-205ENST00000600117 KIAA1210Q9ULL0 1709 aa27.04■■□□□ 1.92
CCDC9-205ENST00000600117 PNPLA6Q8IY17 1366 aa27.01■■□□□ 1.91
CCDC9-205ENST00000600117 ADGRB1O14514 1584 aa27.01■■□□□ 1.91
CCDC9-205ENST00000600117 TRPM1Q7Z4N2 1603 aa27■■□□□ 1.91
CCDC9-205ENST00000600117 EP400Q96L91 3159 aa27■■□□□ 1.91
CCDC9-205ENST00000600117 TMEM132EQ6IEE7 984 aa26.96■■□□□ 1.91
CCDC9-205ENST00000600117 NGLY1Q96IV0 654 aa26.96■■□□□ 1.91
CCDC9-205ENST00000600117 DDX17Q92841 729 aaKnown RBP26.95■■□□□ 1.9
CCDC9-205ENST00000600117 ADGRL3Q9HAR2 1447 aa26.95■■□□□ 1.9
CCDC9-205ENST00000600117 NBPF1Q3BBV0 1214 aa26.94■■□□□ 1.9
CCDC9-205ENST00000600117 ATAD2Q6PL18 1390 aa26.94■■□□□ 1.9
CCDC9-205ENST00000600117 RALGAPBQ86X10 1494 aa26.93■■□□□ 1.9
CCDC9-205ENST00000600117 LRPPRCP42704 1394 aaKnown RBP26.93■■□□□ 1.9
CCDC9-205ENST00000600117 YTHDC2Q9H6S0 1430 aaKnown RBP26.92■■□□□ 1.9
CCDC9-205ENST00000600117 NALCNQ8IZF0 1738 aa26.91■■□□□ 1.9
CCDC9-205ENST00000600117 KNDC1Q76NI1 1749 aa26.9■■□□□ 1.9
CCDC9-205ENST00000600117 TECPR2O15040 1411 aa26.9■■□□□ 1.9
CCDC9-205ENST00000600117 ABCC11Q96J66 1382 aa26.89■■□□□ 1.9
CCDC9-205ENST00000600117 ADAMTS2O95450 1211 aa26.89■■□□□ 1.9
CCDC9-205ENST00000600117 GPRASP1Q5JY77 1395 aa26.88■■□□□ 1.89
CCDC9-205ENST00000600117 ROCK2O75116 1388 aaKnown RBP26.86■■□□□ 1.89
CCDC9-205ENST00000600117 PTCH1Q13635 1447 aa26.86■■□□□ 1.89
CCDC9-205ENST00000600117 C1orf167Q5SNV9 1468 aa26.86■■□□□ 1.89
CCDC9-205ENST00000600117 STK26Q9P289 416 aa26.85■■□□□ 1.89
CCDC9-205ENST00000600117 USP21Q9UK80 565 aa26.85■■□□□ 1.89
CCDC9-205ENST00000600117 TRPC5Q9UL62 973 aaPredicted RBP26.85■■□□□ 1.89
CCDC9-205ENST00000600117 ROBO2Q9HCK4 1378 aa26.84■■□□□ 1.89
CCDC9-205ENST00000600117 DLC1Q96QB1 1528 aa26.84■■□□□ 1.89
CCDC9-205ENST00000600117 ZRANB1Q9UGI0 708 aa26.83■■□□□ 1.89
CCDC9-205ENST00000600117 SOS2Q07890 1332 aaPredicted RBP26.82■■□□□ 1.88
CCDC9-205ENST00000600117 FNBP4Q8N3X1 1017 aaPredicted RBP26.81■■□□□ 1.88
CCDC9-205ENST00000600117 ARHGEF28Q8N1W1 1705 aaKnown RBP26.8■■□□□ 1.88
CCDC9-205ENST00000600117 SIRT1Q96EB6 747 aa26.79■■□□□ 1.88
CCDC9-205ENST00000600117 TRAK1Q9UPV9 953 aa26.79■■□□□ 1.88
CCDC9-205ENST00000600117 ATRNO75882 1429 aa26.79■■□□□ 1.88
CCDC9-205ENST00000600117 COL22A1Q8NFW1 1626 aaPredicted RBP26.77■■□□□ 1.88
CCDC9-205ENST00000600117 CARD11Q9BXL7 1154 aa26.77■■□□□ 1.88
CCDC9-205ENST00000600117 PLEKHH1Q9ULM0 1364 aa26.76■■□□□ 1.87
CCDC9-205ENST00000600117 WAPLQ7Z5K2 1190 aa26.75■■□□□ 1.87
CCDC9-205ENST00000600117 CCDC125Q86Z20 511 aa26.75■■□□□ 1.87
CCDC9-205ENST00000600117 ORAI2Q96SN7 254 aa26.75■■□□□ 1.87
CCDC9-205ENST00000600117 PRAM1Q96QH2 718 aa26.72■■□□□ 1.87
CCDC9-205ENST00000600117 MARF1Q9Y4F3 1742 aaKnown RBP26.69■■□□□ 1.86
CCDC9-205ENST00000600117 ZEB1P37275 1124 aaPredicted RBP26.68■■□□□ 1.86
CCDC9-205ENST00000600117 BCL9LQ86UU0 1499 aa26.68■■□□□ 1.86
CCDC9-205ENST00000600117 POGKQ9P215 609 aa26.67■■□□□ 1.86
CCDC9-205ENST00000600117 SAFB2Q14151 953 aaKnown RBP eCLIP26.65■■□□□ 1.86
CCDC9-205ENST00000600117 EIF3AQ14152 1382 aaKnown RBP26.65■■□□□ 1.86
CCDC9-205ENST00000600117 USP47Q96K76 1375 aa26.65■■□□□ 1.86
CCDC9-205ENST00000600117 CENPJQ9HC77 1338 aaPredicted RBP26.65■■□□□ 1.86
CCDC9-205ENST00000600117 NPHP3Q7Z494 1330 aa26.64■■□□□ 1.85
CCDC9-205ENST00000600117 QRICH2Q9H0J4 1663 aa26.63■■□□□ 1.85
CCDC9-205ENST00000600117 GJD4Q96KN9 370 aaPredicted RBP26.63■■□□□ 1.85
CCDC9-205ENST00000600117 ADGRB2O60241 1585 aa26.63■■□□□ 1.85
CCDC9-205ENST00000600117 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.61■■□□□ 1.85
CCDC9-205ENST00000600117 PXDNQ92626 1479 aa26.61■■□□□ 1.85
CCDC9-205ENST00000600117 CDC42BPGQ6DT37 1551 aa26.6■■□□□ 1.85
CCDC9-205ENST00000600117 MINK1Q8N4C8 1332 aaPredicted RBP26.59■■□□□ 1.85
CCDC9-205ENST00000600117 BLMP54132 1417 aaPredicted RBP26.57■■□□□ 1.84
CCDC9-205ENST00000600117 ST20-MTHFSA0A0A6YYL1 179 aa26.57■■□□□ 1.84
CCDC9-205ENST00000600117 ESCO1Q5FWF5 840 aa26.57■■□□□ 1.84
CCDC9-205ENST00000600117 SBNO2Q9Y2G9 1366 aa26.57■■□□□ 1.84
CCDC9-205ENST00000600117 HIRIP3Q9BW71 556 aaPredicted RBP26.55■■□□□ 1.84
CCDC9-205ENST00000600117 TESK2Q96S53 571 aa26.54■■□□□ 1.84
CCDC9-205ENST00000600117 GLI3P10071 1580 aa26.54■■□□□ 1.84
CCDC9-205ENST00000600117 FMN2Q9NZ56 1722 aa26.53■■□□□ 1.84
CCDC9-205ENST00000600117 EIF4G2P78344 907 aaKnown RBP eCLIP26.53■■□□□ 1.84
CCDC9-205ENST00000600117 TULP4Q9NRJ4 1543 aa26.53■■□□□ 1.84
CCDC9-205ENST00000600117 FOXO3O43524 673 aa26.52■■□□□ 1.84
CCDC9-205ENST00000600117 HSPA5P11021 654 aaKnown RBP26.52■■□□□ 1.84
CCDC9-205ENST00000600117 UNC5CLQ8IV45 518 aa26.51■■□□□ 1.83
CCDC9-205ENST00000600117 BRWD3Q6RI45 1802 aa26.51■■□□□ 1.83
CCDC9-205ENST00000600117 SLIT2O94813 1529 aa26.5■■□□□ 1.83
CCDC9-205ENST00000600117 WASLO00401 505 aaPredicted RBP26.5■■□□□ 1.83
CCDC9-205ENST00000600117 XPCQ01831 940 aaPredicted RBP26.5■■□□□ 1.83
CCDC9-205ENST00000600117 LRP5O75197 1615 aa26.47■■□□□ 1.83
CCDC9-205ENST00000600117 DEFB132Q7Z7B7 95 aa26.47■■□□□ 1.83
CCDC9-205ENST00000600117 CDK19Q9BWU1 502 aa26.46■■□□□ 1.83
CCDC9-205ENST00000600117 USP32Q8NFA0 1604 aa26.46■■□□□ 1.83
CCDC9-205ENST00000600117 EVC2Q86UK5 1308 aa26.44■■□□□ 1.82
CCDC9-205ENST00000600117 SF3B2Q13435 895 aaKnown RBP26.44■■□□□ 1.82
CCDC9-205ENST00000600117 ANKARQ7Z5J8 1434 aa26.43■■□□□ 1.82
CCDC9-205ENST00000600117 SPATA31A3Q5VYP0 1347 aa26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms