RNA–Protein interactions for RNA: ENST00000599479.1

TMEM38A-203, Transcript of transmembrane protein 38A, humanhuman

TSL 3

Gene TMEM38A, Length 410 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38A-203ENST00000599479 C1orf167Q5SNV9 1468 aa17.56■□□□□ 0.4
TMEM38A-203ENST00000599479 ROBO1Q9Y6N7 1651 aa17.55■□□□□ 0.4
TMEM38A-203ENST00000599479 CLSPNQ9HAW4 1339 aa17.55■□□□□ 0.4
TMEM38A-203ENST00000599479 KIAA1210Q9ULL0 1709 aa17.54■□□□□ 0.4
TMEM38A-203ENST00000599479 NBPF8Q3BBV2 869 aa17.53■□□□□ 0.4
TMEM38A-203ENST00000599479 CDC42BPGQ6DT37 1551 aa17.53■□□□□ 0.4
TMEM38A-203ENST00000599479 ORAI2Q96SN7 254 aa17.51■□□□□ 0.39
TMEM38A-203ENST00000599479 POGKQ9P215 609 aa17.51■□□□□ 0.39
TMEM38A-203ENST00000599479 AHDC1Q5TGY3 1603 aaPredicted RBP17.49■□□□□ 0.39
TMEM38A-203ENST00000599479 TONSLQ96HA7 1378 aa17.49■□□□□ 0.39
TMEM38A-203ENST00000599479 TIMELESSQ9UNS1 1208 aa17.48■□□□□ 0.39
TMEM38A-203ENST00000599479 GPRASP1Q5JY77 1395 aa17.48■□□□□ 0.39
TMEM38A-203ENST00000599479 SAFB2Q14151 953 aaKnown RBP eCLIP17.47■□□□□ 0.39
TMEM38A-203ENST00000599479 SOS2Q07890 1332 aaPredicted RBP17.46■□□□□ 0.38
TMEM38A-203ENST00000599479 WASLO00401 505 aaPredicted RBP17.45■□□□□ 0.38
TMEM38A-203ENST00000599479 ESCO1Q5FWF5 840 aa17.45■□□□□ 0.38
TMEM38A-203ENST00000599479 ADGRB2O60241 1585 aa17.45■□□□□ 0.38
TMEM38A-203ENST00000599479 COL16A1Q07092 1604 aaPredicted RBP17.44■□□□□ 0.38
TMEM38A-203ENST00000599479 JCADQ9P266 1359 aa17.44■□□□□ 0.38
TMEM38A-203ENST00000599479 DDX17Q92841 729 aaKnown RBP17.43■□□□□ 0.38
TMEM38A-203ENST00000599479 LRRC59Q96AG4 307 aaKnown RBP17.43■□□□□ 0.38
TMEM38A-203ENST00000599479 MINK1Q8N4C8 1332 aaPredicted RBP17.43■□□□□ 0.38
TMEM38A-203ENST00000599479 TRPM1Q7Z4N2 1603 aa17.43■□□□□ 0.38
TMEM38A-203ENST00000599479 ANKARQ7Z5J8 1434 aa17.42■□□□□ 0.38
TMEM38A-203ENST00000599479 NUTM2FA1L443 756 aa17.42■□□□□ 0.38
TMEM38A-203ENST00000599479 HIRIP3Q9BW71 556 aaPredicted RBP17.42■□□□□ 0.38
TMEM38A-203ENST00000599479 ROCK2O75116 1388 aaKnown RBP17.41■□□□□ 0.38
TMEM38A-203ENST00000599479 ARHGEF28Q8N1W1 1705 aaKnown RBP17.41■□□□□ 0.38
TMEM38A-203ENST00000599479 FMN2Q9NZ56 1722 aa17.41■□□□□ 0.38
TMEM38A-203ENST00000599479 NHSL1Q5SYE7 1610 aa17.41■□□□□ 0.38
TMEM38A-203ENST00000599479 NPHP3Q7Z494 1330 aa17.41■□□□□ 0.38
TMEM38A-203ENST00000599479 PRR36Q9H6K5 1346 aa17.41■□□□□ 0.38
TMEM38A-203ENST00000599479 CENPJQ9HC77 1338 aaPredicted RBP17.41■□□□□ 0.38
TMEM38A-203ENST00000599479 PHLPP1O60346 1717 aa17.41■□□□□ 0.38
TMEM38A-203ENST00000599479 FOXO3O43524 673 aa17.4■□□□□ 0.38
TMEM38A-203ENST00000599479 PHF8Q9UPP1 1060 aa17.39■□□□□ 0.37
TMEM38A-203ENST00000599479 SPATA31A6Q5VVP1 1343 aa17.39■□□□□ 0.37
TMEM38A-203ENST00000599479 EIF3AQ14152 1382 aaKnown RBP17.39■□□□□ 0.37
TMEM38A-203ENST00000599479 RALGAPBQ86X10 1494 aa17.38■□□□□ 0.37
TMEM38A-203ENST00000599479 CDK19Q9BWU1 502 aa17.38■□□□□ 0.37
TMEM38A-203ENST00000599479 CCER1Q8TC90 406 aaPredicted RBP17.37■□□□□ 0.37
TMEM38A-203ENST00000599479 NUDT16Q96DE0 195 aaKnown RBP17.36■□□□□ 0.37
TMEM38A-203ENST00000599479 CARD11Q9BXL7 1154 aa17.36■□□□□ 0.37
TMEM38A-203ENST00000599479 PXDNQ92626 1479 aa17.36■□□□□ 0.37
TMEM38A-203ENST00000599479 TULP4Q9NRJ4 1543 aa17.36■□□□□ 0.37
TMEM38A-203ENST00000599479 USP32Q8NFA0 1604 aa17.36■□□□□ 0.37
TMEM38A-203ENST00000599479 MED1Q15648 1581 aaPredicted RBP17.35■□□□□ 0.37
TMEM38A-203ENST00000599479 PNPLA6Q8IY17 1366 aa17.34■□□□□ 0.37
TMEM38A-203ENST00000599479 DISP3Q9P2K9 1392 aa17.34■□□□□ 0.37
TMEM38A-203ENST00000599479 CCDC61Q9Y6R9 512 aa17.34■□□□□ 0.37
TMEM38A-203ENST00000599479 SBNO2Q9Y2G9 1366 aa17.33■□□□□ 0.36
TMEM38A-203ENST00000599479 PLEKHG3A1L390 1219 aa17.33■□□□□ 0.36
TMEM38A-203ENST00000599479 KRT28Q7Z3Y7 464 aa17.33■□□□□ 0.36
TMEM38A-203ENST00000599479 ATP7BP35670 1465 aa17.32■□□□□ 0.36
TMEM38A-203ENST00000599479 SPATA31A3Q5VYP0 1347 aa17.32■□□□□ 0.36
TMEM38A-203ENST00000599479 PMFBP1Q8TBY8 1022 aa17.32■□□□□ 0.36
TMEM38A-203ENST00000599479 RGS17Q9UGC6 210 aaPredicted RBP17.31■□□□□ 0.36
TMEM38A-203ENST00000599479 KIF1AQ12756 1690 aa17.31■□□□□ 0.36
TMEM38A-203ENST00000599479 SHPRHQ149N8 1683 aa17.31■□□□□ 0.36
TMEM38A-203ENST00000599479 XPCQ01831 940 aaPredicted RBP17.3■□□□□ 0.36
TMEM38A-203ENST00000599479 PSME1Q06323 249 aa17.3■□□□□ 0.36
TMEM38A-203ENST00000599479 SBNO1A3KN83 1393 aa17.29■□□□□ 0.36
TMEM38A-203ENST00000599479 RGPD8O14715 1765 aaPredicted RBP17.29■□□□□ 0.36
TMEM38A-203ENST00000599479 LRP6O75581 1613 aa17.29■□□□□ 0.36
TMEM38A-203ENST00000599479 EVC2Q86UK5 1308 aa17.28■□□□□ 0.36
TMEM38A-203ENST00000599479 CABP2Q9NPB3 220 aa17.28■□□□□ 0.36
TMEM38A-203ENST00000599479 POLR3AO14802 1390 aaPredicted RBP17.28■□□□□ 0.36
TMEM38A-203ENST00000599479 SRPK2P78362 688 aaKnown RBP17.27■□□□□ 0.36
TMEM38A-203ENST00000599479 TESK2Q96S53 571 aa17.27■□□□□ 0.36
TMEM38A-203ENST00000599479 PUS7Q96PZ0 661 aaKnown RBP17.26■□□□□ 0.35
TMEM38A-203ENST00000599479 ST20-MTHFSA0A0A6YYL1 179 aa17.25■□□□□ 0.35
TMEM38A-203ENST00000599479 NGDNQ8NEJ9 315 aaKnown RBP17.25■□□□□ 0.35
TMEM38A-203ENST00000599479 QRICH2Q9H0J4 1663 aa17.25■□□□□ 0.35
TMEM38A-203ENST00000599479 ACEP12821 1306 aa17.24■□□□□ 0.35
TMEM38A-203ENST00000599479 SLC24A1O60721 1099 aa17.24■□□□□ 0.35
TMEM38A-203ENST00000599479 TNS3Q68CZ2 1445 aa17.23■□□□□ 0.35
TMEM38A-203ENST00000599479 COL22A1Q8NFW1 1626 aaPredicted RBP17.23■□□□□ 0.35
TMEM38A-203ENST00000599479 NUTM2BA6NNL0 878 aaPredicted RBP17.23■□□□□ 0.35
TMEM38A-203ENST00000599479 NUTM2EB1AL46 878 aaPredicted RBP17.23■□□□□ 0.35
TMEM38A-203ENST00000599479 ILDR2Q71H61 639 aa17.23■□□□□ 0.35
TMEM38A-203ENST00000599479 NUTM2AQ8IVF1 878 aaPredicted RBP17.23■□□□□ 0.35
TMEM38A-203ENST00000599479 PHF23Q9BUL5 403 aaPredicted RBP17.23■□□□□ 0.35
TMEM38A-203ENST00000599479 CABP1Q9NZU7 370 aa17.23■□□□□ 0.35
TMEM38A-203ENST00000599479 TOPAZ1Q8N9V7 1692 aa17.21■□□□□ 0.35
TMEM38A-203ENST00000599479 ARHGEF10O15013 1369 aa17.21■□□□□ 0.35
TMEM38A-203ENST00000599479 PPIP5K1Q6PFW1 1433 aa17.21■□□□□ 0.34
TMEM38A-203ENST00000599479 BRD4O60885 1362 aaPredicted RBP17.2■□□□□ 0.34
TMEM38A-203ENST00000599479 ATAD2Q6PL18 1390 aa17.2■□□□□ 0.34
TMEM38A-203ENST00000599479 USP47Q96K76 1375 aa17.19■□□□□ 0.34
TMEM38A-203ENST00000599479 POTEAQ6S8J7 498 aa17.19■□□□□ 0.34
TMEM38A-203ENST00000599479 FNBP4Q8N3X1 1017 aaPredicted RBP17.19■□□□□ 0.34
TMEM38A-203ENST00000599479 ITSN1Q15811 1721 aa17.18■□□□□ 0.34
TMEM38A-203ENST00000599479 MEX3CQ5U5Q3 659 aaKnown RBP17.18■□□□□ 0.34
TMEM38A-203ENST00000599479 ZNF692Q9BU19 519 aaPredicted RBP17.18■□□□□ 0.34
TMEM38A-203ENST00000599479 TRPM3Q9HCF6 1732 aaPredicted RBP17.18■□□□□ 0.34
TMEM38A-203ENST00000599479 ADAMTS2O95450 1211 aa17.17■□□□□ 0.34
TMEM38A-203ENST00000599479 ZNF772Q68DY9 489 aaPredicted RBP17.17■□□□□ 0.34
TMEM38A-203ENST00000599479 SSH2Q76I76 1423 aa17.17■□□□□ 0.34
TMEM38A-203ENST00000599479 CPSF1Q10570 1443 aaKnown RBP17.16■□□□□ 0.34
TMEM38A-203ENST00000599479 CABLES1Q8TDN4 633 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms