RNA–Protein interactions for RNA: ENST00000597088.1

PRKD2-207, Transcript of protein kinase D2, humanhuman

TSL 2

Gene PRKD2, Length 855 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD2-207ENST00000597088 MST1RQ04912 1400 aa34.86■■■■□ 3.17
PRKD2-207ENST00000597088 ARHGEF28Q8N1W1 1705 aaKnown RBP34.86■■■■□ 3.17
PRKD2-207ENST00000597088 NBPF1Q3BBV0 1214 aa34.85■■■■□ 3.17
PRKD2-207ENST00000597088 CLSPNQ9HAW4 1339 aa34.84■■■■□ 3.17
PRKD2-207ENST00000597088 HSPA1LP34931 641 aa34.84■■■■□ 3.17
PRKD2-207ENST00000597088 PRAM1Q96QH2 718 aa34.84■■■■□ 3.17
PRKD2-207ENST00000597088 SAFB2Q14151 953 aaKnown RBP eCLIP34.79■■■■□ 3.16
PRKD2-207ENST00000597088 CCER1Q8TC90 406 aaPredicted RBP34.79■■■■□ 3.16
PRKD2-207ENST00000597088 POGKQ9P215 609 aa34.79■■■■□ 3.16
PRKD2-207ENST00000597088 NBPF8Q3BBV2 869 aa34.78■■■■□ 3.16
PRKD2-207ENST00000597088 FMN2Q9NZ56 1722 aa34.75■■■■□ 3.15
PRKD2-207ENST00000597088 C1orf167Q5SNV9 1468 aa34.75■■■■□ 3.15
PRKD2-207ENST00000597088 ADGRB2O60241 1585 aa34.74■■■■□ 3.15
PRKD2-207ENST00000597088 BRINP3Q76B58 766 aa34.72■■■■□ 3.15
PRKD2-207ENST00000597088 ROCK2O75116 1388 aaKnown RBP34.72■■■■□ 3.15
PRKD2-207ENST00000597088 PHLPP1O60346 1717 aa34.72■■■■□ 3.15
PRKD2-207ENST00000597088 AHDC1Q5TGY3 1603 aaPredicted RBP34.68■■■■□ 3.14
PRKD2-207ENST00000597088 RALGAPBQ86X10 1494 aa34.68■■■■□ 3.14
PRKD2-207ENST00000597088 MINK1Q8N4C8 1332 aaPredicted RBP34.66■■■■□ 3.14
PRKD2-207ENST00000597088 NHSL1Q5SYE7 1610 aa34.65■■■■□ 3.14
PRKD2-207ENST00000597088 GPRASP1Q5JY77 1395 aa34.64■■■■□ 3.14
PRKD2-207ENST00000597088 HIRIP3Q9BW71 556 aaPredicted RBP34.64■■■■□ 3.14
PRKD2-207ENST00000597088 COL16A1Q07092 1604 aaPredicted RBP34.63■■■■□ 3.13
PRKD2-207ENST00000597088 NUTM2FA1L443 756 aa34.63■■■■□ 3.13
PRKD2-207ENST00000597088 QRICH2Q9H0J4 1663 aa34.61■■■■□ 3.13
PRKD2-207ENST00000597088 ORAI2Q96SN7 254 aa34.61■■■■□ 3.13
PRKD2-207ENST00000597088 RGPD8O14715 1765 aaPredicted RBP34.6■■■■□ 3.13
PRKD2-207ENST00000597088 TIMELESSQ9UNS1 1208 aa34.59■■■■□ 3.13
PRKD2-207ENST00000597088 USP32Q8NFA0 1604 aa34.59■■■■□ 3.13
PRKD2-207ENST00000597088 CENPJQ9HC77 1338 aaPredicted RBP34.57■■■■□ 3.13
PRKD2-207ENST00000597088 ESCO1Q5FWF5 840 aa34.56■■■■□ 3.12
PRKD2-207ENST00000597088 DDX17Q92841 729 aaKnown RBP34.54■■■■□ 3.12
PRKD2-207ENST00000597088 CARD11Q9BXL7 1154 aa34.54■■■■□ 3.12
PRKD2-207ENST00000597088 TULP4Q9NRJ4 1543 aa34.54■■■■□ 3.12
PRKD2-207ENST00000597088 ANKARQ7Z5J8 1434 aa34.54■■■■□ 3.12
PRKD2-207ENST00000597088 WASLO00401 505 aaPredicted RBP34.53■■■■□ 3.12
PRKD2-207ENST00000597088 KIF1AQ12756 1690 aa34.53■■■■□ 3.12
PRKD2-207ENST00000597088 EIF3AQ14152 1382 aaKnown RBP34.52■■■■□ 3.12
PRKD2-207ENST00000597088 PRR36Q9H6K5 1346 aa34.46■■■■□ 3.11
PRKD2-207ENST00000597088 JCADQ9P266 1359 aa34.44■■■■□ 3.1
PRKD2-207ENST00000597088 ATP7BP35670 1465 aa34.44■■■■□ 3.1
PRKD2-207ENST00000597088 SHPRHQ149N8 1683 aa34.44■■■■□ 3.1
PRKD2-207ENST00000597088 ITSN1Q15811 1721 aa34.44■■■■□ 3.1
PRKD2-207ENST00000597088 CDK19Q9BWU1 502 aa34.43■■■■□ 3.1
PRKD2-207ENST00000597088 MED1Q15648 1581 aaPredicted RBP34.42■■■■□ 3.1
PRKD2-207ENST00000597088 NPHP3Q7Z494 1330 aa34.42■■■■□ 3.1
PRKD2-207ENST00000597088 PHF8Q9UPP1 1060 aa34.42■■■■□ 3.1
PRKD2-207ENST00000597088 PXDNQ92626 1479 aa34.41■■■■□ 3.1
PRKD2-207ENST00000597088 FOXO3O43524 673 aa34.41■■■■□ 3.1
PRKD2-207ENST00000597088 SOS2Q07890 1332 aaPredicted RBP34.4■■■■□ 3.1
PRKD2-207ENST00000597088 TOPAZ1Q8N9V7 1692 aa34.4■■■■□ 3.1
PRKD2-207ENST00000597088 XPCQ01831 940 aaPredicted RBP34.36■■■■□ 3.09
PRKD2-207ENST00000597088 LRRC59Q96AG4 307 aaKnown RBP34.36■■■■□ 3.09
PRKD2-207ENST00000597088 NUDT16Q96DE0 195 aaKnown RBP34.36■■■■□ 3.09
PRKD2-207ENST00000597088 PMFBP1Q8TBY8 1022 aa34.35■■■■□ 3.09
PRKD2-207ENST00000597088 SRPK2P78362 688 aaKnown RBP34.33■■■■□ 3.09
PRKD2-207ENST00000597088 SBNO2Q9Y2G9 1366 aa34.33■■■■□ 3.09
PRKD2-207ENST00000597088 CABP2Q9NPB3 220 aa34.32■■■■□ 3.08
PRKD2-207ENST00000597088 EVC2Q86UK5 1308 aa34.31■■■■□ 3.08
PRKD2-207ENST00000597088 PNPLA6Q8IY17 1366 aa34.31■■■■□ 3.08
PRKD2-207ENST00000597088 USP47Q96K76 1375 aa34.29■■■■□ 3.08
PRKD2-207ENST00000597088 KRT28Q7Z3Y7 464 aa34.27■■■■□ 3.08
PRKD2-207ENST00000597088 SPATA31A6Q5VVP1 1343 aa34.27■■■■□ 3.08
PRKD2-207ENST00000597088 CCDC61Q9Y6R9 512 aa34.26■■■■□ 3.08
PRKD2-207ENST00000597088 LRP6O75581 1613 aa34.25■■■■□ 3.07
PRKD2-207ENST00000597088 TRPM3Q9HCF6 1732 aaPredicted RBP34.24■■■■□ 3.07
PRKD2-207ENST00000597088 PPIP5K1Q6PFW1 1433 aa34.24■■■■□ 3.07
PRKD2-207ENST00000597088 COL22A1Q8NFW1 1626 aaPredicted RBP34.24■■■■□ 3.07
PRKD2-207ENST00000597088 ST20-MTHFSA0A0A6YYL1 179 aa34.24■■■■□ 3.07
PRKD2-207ENST00000597088 PSME1Q06323 249 aa34.24■■■■□ 3.07
PRKD2-207ENST00000597088 DISP3Q9P2K9 1392 aa34.23■■■■□ 3.07
PRKD2-207ENST00000597088 NGDNQ8NEJ9 315 aaKnown RBP34.23■■■■□ 3.07
PRKD2-207ENST00000597088 SPATA31A3Q5VYP0 1347 aa34.2■■■■□ 3.07
PRKD2-207ENST00000597088 TNS3Q68CZ2 1445 aa34.2■■■■□ 3.06
PRKD2-207ENST00000597088 TESK2Q96S53 571 aa34.19■■■■□ 3.06
PRKD2-207ENST00000597088 SBNO1A3KN83 1393 aa34.19■■■■□ 3.06
PRKD2-207ENST00000597088 POLR3AO14802 1390 aaPredicted RBP34.19■■■■□ 3.06
PRKD2-207ENST00000597088 PLEKHG3A1L390 1219 aa34.18■■■■□ 3.06
PRKD2-207ENST00000597088 NUTM2BA6NNL0 878 aaPredicted RBP34.17■■■■□ 3.06
PRKD2-207ENST00000597088 NUTM2EB1AL46 878 aaPredicted RBP34.17■■■■□ 3.06
PRKD2-207ENST00000597088 ACEP12821 1306 aa34.17■■■■□ 3.06
PRKD2-207ENST00000597088 NUTM2AQ8IVF1 878 aaPredicted RBP34.17■■■■□ 3.06
PRKD2-207ENST00000597088 ATAD2Q6PL18 1390 aa34.15■■■■□ 3.06
PRKD2-207ENST00000597088 ALS2Q96Q42 1657 aa34.15■■■■□ 3.06
PRKD2-207ENST00000597088 CABP1Q9NZU7 370 aa34.13■■■■□ 3.05
PRKD2-207ENST00000597088 PHF23Q9BUL5 403 aaPredicted RBP34.12■■■■□ 3.05
PRKD2-207ENST00000597088 ARHGEF10O15013 1369 aa34.1■■■■□ 3.05
PRKD2-207ENST00000597088 MEX3CQ5U5Q3 659 aaKnown RBP34.09■■■■□ 3.05
PRKD2-207ENST00000597088 LMOD2Q6P5Q4 547 aa34.09■■■■□ 3.05
PRKD2-207ENST00000597088 ABCA3Q99758 1704 aa34.07■■■■□ 3.04
PRKD2-207ENST00000597088 AKAP12Q02952 1782 aa34.06■■■■□ 3.04
PRKD2-207ENST00000597088 SLC24A1O60721 1099 aa34.06■■■■□ 3.04
PRKD2-207ENST00000597088 PAK3O75914 559 aaPredicted RBP34.06■■■■□ 3.04
PRKD2-207ENST00000597088 USP6P35125 1406 aa34.03■■■■□ 3.04
PRKD2-207ENST00000597088 MARF1Q9Y4F3 1742 aaKnown RBP34.02■■■■□ 3.04
PRKD2-207ENST00000597088 ADAMTS2O95450 1211 aa34.02■■■■□ 3.04
PRKD2-207ENST00000597088 TMF1P82094 1093 aa34.02■■■■□ 3.04
PRKD2-207ENST00000597088 PUS7Q96PZ0 661 aaKnown RBP34.01■■■■□ 3.03
PRKD2-207ENST00000597088 PLEKHG5O94827 1062 aa34■■■■□ 3.03
PRKD2-207ENST00000597088 EIF4G2P78344 907 aaKnown RBP eCLIP34■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms