RNA–Protein interactions for RNA: ENST00000596360.1

CRLF1-204, Transcript of cytokine receptor like factor 1, humanhuman

TSL 2

Gene CRLF1, Length 413 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF1-204ENST00000596360 TRAK1Q9UPV9 953 aa23.08■■□□□ 1.29
CRLF1-204ENST00000596360 TONSLQ96HA7 1378 aa23.06■■□□□ 1.28
CRLF1-204ENST00000596360 NBPF1Q3BBV0 1214 aa23.06■■□□□ 1.28
CRLF1-204ENST00000596360 BRINP3Q76B58 766 aa23.06■■□□□ 1.28
CRLF1-204ENST00000596360 POGKQ9P215 609 aa23.06■■□□□ 1.28
CRLF1-204ENST00000596360 C1orf167Q5SNV9 1468 aa23.05■■□□□ 1.28
CRLF1-204ENST00000596360 CLSPNQ9HAW4 1339 aa23.05■■□□□ 1.28
CRLF1-204ENST00000596360 ARHGEF28Q8N1W1 1705 aaKnown RBP23.02■■□□□ 1.28
CRLF1-204ENST00000596360 AHDC1Q5TGY3 1603 aaPredicted RBP23.01■■□□□ 1.27
CRLF1-204ENST00000596360 TRPM1Q7Z4N2 1603 aa23.01■■□□□ 1.27
CRLF1-204ENST00000596360 PHLPP1O60346 1717 aa23.01■■□□□ 1.27
CRLF1-204ENST00000596360 SAFB2Q14151 953 aaKnown RBP eCLIP23■■□□□ 1.27
CRLF1-204ENST00000596360 NBPF8Q3BBV2 869 aa22.99■■□□□ 1.27
CRLF1-204ENST00000596360 FMN2Q9NZ56 1722 aa22.99■■□□□ 1.27
CRLF1-204ENST00000596360 ADGRB2O60241 1585 aa22.98■■□□□ 1.27
CRLF1-204ENST00000596360 ORAI2Q96SN7 254 aa22.97■■□□□ 1.27
CRLF1-204ENST00000596360 COL16A1Q07092 1604 aaPredicted RBP22.96■■□□□ 1.27
CRLF1-204ENST00000596360 NHSL1Q5SYE7 1610 aa22.96■■□□□ 1.27
CRLF1-204ENST00000596360 ROCK2O75116 1388 aaKnown RBP22.94■■□□□ 1.26
CRLF1-204ENST00000596360 MINK1Q8N4C8 1332 aaPredicted RBP22.94■■□□□ 1.26
CRLF1-204ENST00000596360 ESCO1Q5FWF5 840 aa22.93■■□□□ 1.26
CRLF1-204ENST00000596360 TIMELESSQ9UNS1 1208 aa22.93■■□□□ 1.26
CRLF1-204ENST00000596360 GPRASP1Q5JY77 1395 aa22.92■■□□□ 1.26
CRLF1-204ENST00000596360 NUTM2FA1L443 756 aa22.92■■□□□ 1.26
CRLF1-204ENST00000596360 CCER1Q8TC90 406 aaPredicted RBP22.91■■□□□ 1.26
CRLF1-204ENST00000596360 HIRIP3Q9BW71 556 aaPredicted RBP22.91■■□□□ 1.26
CRLF1-204ENST00000596360 JCADQ9P266 1359 aa22.9■■□□□ 1.26
CRLF1-204ENST00000596360 WASLO00401 505 aaPredicted RBP22.9■■□□□ 1.26
CRLF1-204ENST00000596360 ANKARQ7Z5J8 1434 aa22.9■■□□□ 1.26
CRLF1-204ENST00000596360 EIF3AQ14152 1382 aaKnown RBP22.89■■□□□ 1.26
CRLF1-204ENST00000596360 DDX17Q92841 729 aaKnown RBP22.89■■□□□ 1.25
CRLF1-204ENST00000596360 RALGAPBQ86X10 1494 aa22.89■■□□□ 1.25
CRLF1-204ENST00000596360 CENPJQ9HC77 1338 aaPredicted RBP22.88■■□□□ 1.25
CRLF1-204ENST00000596360 RGPD8O14715 1765 aaPredicted RBP22.88■■□□□ 1.25
CRLF1-204ENST00000596360 SOS2Q07890 1332 aaPredicted RBP22.87■■□□□ 1.25
CRLF1-204ENST00000596360 LRRC59Q96AG4 307 aaKnown RBP22.87■■□□□ 1.25
CRLF1-204ENST00000596360 KIF1AQ12756 1690 aa22.87■■□□□ 1.25
CRLF1-204ENST00000596360 NPHP3Q7Z494 1330 aa22.86■■□□□ 1.25
CRLF1-204ENST00000596360 TULP4Q9NRJ4 1543 aa22.86■■□□□ 1.25
CRLF1-204ENST00000596360 USP32Q8NFA0 1604 aa22.86■■□□□ 1.25
CRLF1-204ENST00000596360 MED1Q15648 1581 aaPredicted RBP22.85■■□□□ 1.25
CRLF1-204ENST00000596360 CARD11Q9BXL7 1154 aa22.84■■□□□ 1.25
CRLF1-204ENST00000596360 PHF8Q9UPP1 1060 aa22.84■■□□□ 1.25
CRLF1-204ENST00000596360 SHPRHQ149N8 1683 aa22.84■■□□□ 1.25
CRLF1-204ENST00000596360 FOXO3O43524 673 aa22.83■■□□□ 1.25
CRLF1-204ENST00000596360 QRICH2Q9H0J4 1663 aa22.83■■□□□ 1.24
CRLF1-204ENST00000596360 PRR36Q9H6K5 1346 aa22.82■■□□□ 1.24
CRLF1-204ENST00000596360 CDK19Q9BWU1 502 aa22.82■■□□□ 1.24
CRLF1-204ENST00000596360 SPATA31A6Q5VVP1 1343 aa22.82■■□□□ 1.24
CRLF1-204ENST00000596360 PXDNQ92626 1479 aa22.81■■□□□ 1.24
CRLF1-204ENST00000596360 DISP3Q9P2K9 1392 aa22.81■■□□□ 1.24
CRLF1-204ENST00000596360 NUDT16Q96DE0 195 aaKnown RBP22.79■■□□□ 1.24
CRLF1-204ENST00000596360 ATP7BP35670 1465 aa22.78■■□□□ 1.24
CRLF1-204ENST00000596360 PNPLA6Q8IY17 1366 aa22.77■■□□□ 1.24
CRLF1-204ENST00000596360 ITSN1Q15811 1721 aa22.77■■□□□ 1.23
CRLF1-204ENST00000596360 KRT28Q7Z3Y7 464 aa22.76■■□□□ 1.23
CRLF1-204ENST00000596360 PMFBP1Q8TBY8 1022 aa22.76■■□□□ 1.23
CRLF1-204ENST00000596360 XPCQ01831 940 aaPredicted RBP22.75■■□□□ 1.23
CRLF1-204ENST00000596360 CCDC61Q9Y6R9 512 aa22.75■■□□□ 1.23
CRLF1-204ENST00000596360 SBNO2Q9Y2G9 1366 aa22.75■■□□□ 1.23
CRLF1-204ENST00000596360 PSME1Q06323 249 aa22.74■■□□□ 1.23
CRLF1-204ENST00000596360 EVC2Q86UK5 1308 aa22.74■■□□□ 1.23
CRLF1-204ENST00000596360 SRPK2P78362 688 aaKnown RBP22.73■■□□□ 1.23
CRLF1-204ENST00000596360 TOPAZ1Q8N9V7 1692 aa22.72■■□□□ 1.23
CRLF1-204ENST00000596360 SPATA31A3Q5VYP0 1347 aa22.72■■□□□ 1.23
CRLF1-204ENST00000596360 LRP6O75581 1613 aa22.71■■□□□ 1.23
CRLF1-204ENST00000596360 PHF23Q9BUL5 403 aaPredicted RBP22.71■■□□□ 1.23
CRLF1-204ENST00000596360 CABP2Q9NPB3 220 aa22.71■■□□□ 1.23
CRLF1-204ENST00000596360 SBNO1A3KN83 1393 aa22.71■■□□□ 1.23
CRLF1-204ENST00000596360 PLEKHG3A1L390 1219 aa22.7■■□□□ 1.22
CRLF1-204ENST00000596360 NGDNQ8NEJ9 315 aaKnown RBP22.7■■□□□ 1.22
CRLF1-204ENST00000596360 COL22A1Q8NFW1 1626 aaPredicted RBP22.7■■□□□ 1.22
CRLF1-204ENST00000596360 NUTM2BA6NNL0 878 aaPredicted RBP22.68■■□□□ 1.22
CRLF1-204ENST00000596360 NUTM2EB1AL46 878 aaPredicted RBP22.68■■□□□ 1.22
CRLF1-204ENST00000596360 NUTM2AQ8IVF1 878 aaPredicted RBP22.68■■□□□ 1.22
CRLF1-204ENST00000596360 TNS3Q68CZ2 1445 aa22.67■■□□□ 1.22
CRLF1-204ENST00000596360 POLR3AO14802 1390 aaPredicted RBP22.67■■□□□ 1.22
CRLF1-204ENST00000596360 PPIP5K1Q6PFW1 1433 aa22.65■■□□□ 1.22
CRLF1-204ENST00000596360 ST20-MTHFSA0A0A6YYL1 179 aa22.65■■□□□ 1.22
CRLF1-204ENST00000596360 SLC24A1O60721 1099 aa22.65■■□□□ 1.22
CRLF1-204ENST00000596360 MEX3CQ5U5Q3 659 aaKnown RBP22.65■■□□□ 1.22
CRLF1-204ENST00000596360 TRPM3Q9HCF6 1732 aaPredicted RBP22.65■■□□□ 1.22
CRLF1-204ENST00000596360 ACEP12821 1306 aa22.64■■□□□ 1.22
CRLF1-204ENST00000596360 RGS17Q9UGC6 210 aaPredicted RBP22.64■■□□□ 1.21
CRLF1-204ENST00000596360 ARHGEF10O15013 1369 aa22.63■■□□□ 1.21
CRLF1-204ENST00000596360 USP47Q96K76 1375 aa22.63■■□□□ 1.21
CRLF1-204ENST00000596360 TESK2Q96S53 571 aa22.63■■□□□ 1.21
CRLF1-204ENST00000596360 ATAD2Q6PL18 1390 aa22.62■■□□□ 1.21
CRLF1-204ENST00000596360 PUS7Q96PZ0 661 aaKnown RBP22.61■■□□□ 1.21
CRLF1-204ENST00000596360 CABP1Q9NZU7 370 aa22.61■■□□□ 1.21
CRLF1-204ENST00000596360 ALS2Q96Q42 1657 aa22.6■■□□□ 1.21
CRLF1-204ENST00000596360 LMOD2Q6P5Q4 547 aa22.58■■□□□ 1.21
CRLF1-204ENST00000596360 BRD4O60885 1362 aaPredicted RBP22.58■■□□□ 1.21
CRLF1-204ENST00000596360 ADAMTS2O95450 1211 aa22.57■■□□□ 1.2
CRLF1-204ENST00000596360 PAK3O75914 559 aaPredicted RBP22.56■■□□□ 1.2
CRLF1-204ENST00000596360 ZNF772Q68DY9 489 aaPredicted RBP22.55■■□□□ 1.2
CRLF1-204ENST00000596360 ILDR2Q71H61 639 aa22.55■■□□□ 1.2
CRLF1-204ENST00000596360 C8orf37Q96NL8 207 aa22.55■■□□□ 1.2
CRLF1-204ENST00000596360 ZNF692Q9BU19 519 aaPredicted RBP22.54■■□□□ 1.2
CRLF1-204ENST00000596360 MARF1Q9Y4F3 1742 aaKnown RBP22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms