RNA–Protein interactions for RNA: ENST00000595231.5

SNRNP70-204, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 1,673 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-204ENST00000595231 ADGRL3Q9HAR2 1447 aa31.89■■■□□ 2.7
SNRNP70-204ENST00000595231 C14orf37Q86TY3 774 aa31.88■■■□□ 2.69
SNRNP70-204ENST00000595231 C19orf44Q9H6X5 657 aa31.88■■■□□ 2.69
SNRNP70-204ENST00000595231 IQSEC2Q5JU85 1478 aa31.85■■■□□ 2.69
SNRNP70-204ENST00000595231 ST20-MTHFSA0A0A6YYL1 179 aa31.84■■■□□ 2.69
SNRNP70-204ENST00000595231 MSH6P52701 1360 aa31.83■■■□□ 2.69
SNRNP70-204ENST00000595231 MINK1Q8N4C8 1332 aaPredicted RBP31.83■■■□□ 2.69
SNRNP70-204ENST00000595231 QRICH2Q9H0J4 1663 aa31.83■■■□□ 2.69
SNRNP70-204ENST00000595231 HIRIP3Q9BW71 556 aaPredicted RBP31.81■■■□□ 2.68
SNRNP70-204ENST00000595231 EIF4G2P78344 907 aaKnown RBP eCLIP31.8■■■□□ 2.683e-49■■□□□ 13.3
SNRNP70-204ENST00000595231 DCCP43146 1447 aa31.79■■■□□ 2.68
SNRNP70-204ENST00000595231 ADGRB2O60241 1585 aa31.78■■■□□ 2.68
SNRNP70-204ENST00000595231 TESK2Q96S53 571 aa31.78■■■□□ 2.68
SNRNP70-204ENST00000595231 SBNO2Q9Y2G9 1366 aa31.77■■■□□ 2.68
SNRNP70-204ENST00000595231 CDC42BPGQ6DT37 1551 aa31.77■■■□□ 2.68
SNRNP70-204ENST00000595231 HSPA5P11021 654 aaKnown RBP31.76■■■□□ 2.68
SNRNP70-204ENST00000595231 ATF3P18847 181 aa31.75■■■□□ 2.67
SNRNP70-204ENST00000595231 CADPS2Q86UW7 1296 aa31.75■■■□□ 2.67
SNRNP70-204ENST00000595231 WASLO00401 505 aaPredicted RBP31.73■■■□□ 2.67
SNRNP70-204ENST00000595231 TULP4Q9NRJ4 1543 aa31.7■■■□□ 2.67
SNRNP70-204ENST00000595231 CDK19Q9BWU1 502 aa31.69■■■□□ 2.66
SNRNP70-204ENST00000595231 FMN2Q9NZ56 1722 aa31.69■■■□□ 2.66
SNRNP70-204ENST00000595231 MST1RQ04912 1400 aa31.68■■■□□ 2.66
SNRNP70-204ENST00000595231 SLAIN2Q9P270 581 aa31.67■■■□□ 2.66
SNRNP70-204ENST00000595231 TOM1O60784 492 aa31.66■■■□□ 2.66
SNRNP70-204ENST00000595231 EVC2Q86UK5 1308 aa31.66■■■□□ 2.66
SNRNP70-204ENST00000595231 NUTM2FA1L443 756 aa31.65■■■□□ 2.66
SNRNP70-204ENST00000595231 UBAP1LF5GYI3 381 aa31.65■■■□□ 2.66
SNRNP70-204ENST00000595231 SLC24A1O60721 1099 aa31.64■■■□□ 2.66
SNRNP70-204ENST00000595231 C1orf167Q5SNV9 1468 aa31.62■■■□□ 2.65
SNRNP70-204ENST00000595231 USP32Q8NFA0 1604 aa31.62■■■□□ 2.65
SNRNP70-204ENST00000595231 PRR36Q9H6K5 1346 aa31.61■■■□□ 2.65
SNRNP70-204ENST00000595231 CABP2Q9NPB3 220 aa31.61■■■□□ 2.65
SNRNP70-204ENST00000595231 DISP3Q9P2K9 1392 aa31.6■■■□□ 2.65
SNRNP70-204ENST00000595231 RGPD8O14715 1765 aaPredicted RBP31.6■■■□□ 2.65
SNRNP70-204ENST00000595231 SRPK2P78362 688 aaKnown RBP31.6■■■□□ 2.65
SNRNP70-204ENST00000595231 TMF1P82094 1093 aa31.59■■■□□ 2.65
SNRNP70-204ENST00000595231 ANKARQ7Z5J8 1434 aa31.59■■■□□ 2.65
SNRNP70-204ENST00000595231 NUDT16Q96DE0 195 aaKnown RBP31.57■■■□□ 2.65
SNRNP70-204ENST00000595231 ATP7BP35670 1465 aa31.57■■■□□ 2.64
SNRNP70-204ENST00000595231 ORAI2Q96SN7 254 aa31.57■■■□□ 2.64
SNRNP70-204ENST00000595231 PIP4K2BP78356 416 aa31.54■■■□□ 2.64
SNRNP70-204ENST00000595231 PUS7Q96PZ0 661 aaKnown RBP31.54■■■□□ 2.64
SNRNP70-204ENST00000595231 C11orf95C9JLR9 678 aaPredicted RBP31.53■■■□□ 2.64
SNRNP70-204ENST00000595231 ESCO1Q5FWF5 840 aa31.53■■■□□ 2.64
SNRNP70-204ENST00000595231 BRINP3Q76B58 766 aa31.53■■■□□ 2.64
SNRNP70-204ENST00000595231 CCDC61Q9Y6R9 512 aa31.52■■■□□ 2.64
SNRNP70-204ENST00000595231 ROBO1Q9Y6N7 1651 aa31.5■■■□□ 2.63
SNRNP70-204ENST00000595231 TOPAZ1Q8N9V7 1692 aa31.49■■■□□ 2.63
SNRNP70-204ENST00000595231 ATAD2Q6PL18 1390 aa31.48■■■□□ 2.63
SNRNP70-204ENST00000595231 CDCA8Q53HL2 280 aa31.47■■■□□ 2.63
SNRNP70-204ENST00000595231 ITSN1Q15811 1721 aa31.46■■■□□ 2.63
SNRNP70-204ENST00000595231 PHF8Q9UPP1 1060 aa31.46■■■□□ 2.63
SNRNP70-204ENST00000595231 SCAF1Q9H7N4 1312 aaKnown RBP31.46■■■□□ 2.63
SNRNP70-204ENST00000595231 PPIP5K1Q6PFW1 1433 aa31.44■■■□□ 2.62
SNRNP70-204ENST00000595231 PMFBP1Q8TBY8 1022 aa31.44■■■□□ 2.62
SNRNP70-204ENST00000595231 CABP1Q9NZU7 370 aa31.44■■■□□ 2.62
SNRNP70-204ENST00000595231 PLEKHG3A1L390 1219 aa31.44■■■□□ 2.62
SNRNP70-204ENST00000595231 FBXO41Q8TF61 875 aa31.42■■■□□ 2.62
SNRNP70-204ENST00000595231 KIF1AQ12756 1690 aa31.4■■■□□ 2.62
SNRNP70-204ENST00000595231 FOXO3O43524 673 aa31.4■■■□□ 2.62
SNRNP70-204ENST00000595231 DDX17Q92841 729 aaKnown RBP31.4■■■□□ 2.62
SNRNP70-204ENST00000595231 KIF7Q2M1P5 1343 aa31.39■■■□□ 2.62
SNRNP70-204ENST00000595231 SLC12A5Q9H2X9 1139 aa31.39■■■□□ 2.62
SNRNP70-204ENST00000595231 POLR3AO14802 1390 aaPredicted RBP31.37■■■□□ 2.61
SNRNP70-204ENST00000595231 ACEP12821 1306 aa31.37■■■□□ 2.61
SNRNP70-204ENST00000595231 TMC1Q8TDI8 760 aa31.37■■■□□ 2.61
SNRNP70-204ENST00000595231 NHSL1Q5SYE7 1610 aa31.36■■■□□ 2.61
SNRNP70-204ENST00000595231 WASHC2AQ641Q2 1341 aa31.36■■■□□ 2.61
SNRNP70-204ENST00000595231 NGDNQ8NEJ9 315 aaKnown RBP31.35■■■□□ 2.61
SNRNP70-204ENST00000595231 POLR3GLQ9BT43 218 aa31.35■■■□□ 2.61
SNRNP70-204ENST00000595231 NINLQ9Y2I6 1382 aa31.34■■■□□ 2.61
SNRNP70-204ENST00000595231 AHDC1Q5TGY3 1603 aaPredicted RBP31.34■■■□□ 2.61
SNRNP70-204ENST00000595231 NPHP3Q7Z494 1330 aa31.34■■■□□ 2.61
SNRNP70-204ENST00000595231 MYOM1P52179 1685 aa31.33■■■□□ 2.61
SNRNP70-204ENST00000595231 CCDC7Q96M83 1385 aa31.33■■■□□ 2.61
SNRNP70-204ENST00000595231 CD163L1Q9NR16 1453 aa31.33■■■□□ 2.61
SNRNP70-204ENST00000595231 CPSF1Q10570 1443 aaKnown RBP31.31■■■□□ 2.6
SNRNP70-204ENST00000595231 XPCQ01831 940 aaPredicted RBP31.3■■■□□ 2.6
SNRNP70-204ENST00000595231 SOS2Q07890 1332 aaPredicted RBP31.3■■■□□ 2.6
SNRNP70-204ENST00000595231 PXDNQ92626 1479 aa31.29■■■□□ 2.6
SNRNP70-204ENST00000595231 PSME1Q06323 249 aa31.29■■■□□ 2.6
SNRNP70-204ENST00000595231 KRT28Q7Z3Y7 464 aa31.29■■■□□ 2.6
SNRNP70-204ENST00000595231 PHLPP1O60346 1717 aa31.27■■■□□ 2.6
SNRNP70-204ENST00000595231 AKAP12Q02952 1782 aa31.27■■■□□ 2.6
SNRNP70-204ENST00000595231 ZNF692Q9BU19 519 aaPredicted RBP31.27■■■□□ 2.6
SNRNP70-204ENST00000595231 HSPA1LP34931 641 aa31.26■■■□□ 2.6
SNRNP70-204ENST00000595231 TERF2IPQ9NYB0 399 aa31.25■■■□□ 2.59
SNRNP70-204ENST00000595231 A0A1W2PP64 1363 aa31.25■■■□□ 2.59
SNRNP70-204ENST00000595231 COL16A1Q07092 1604 aaPredicted RBP31.24■■■□□ 2.59
SNRNP70-204ENST00000595231 USP6P35125 1406 aa31.23■■■□□ 2.59
SNRNP70-204ENST00000595231 ANKRD36BQ8N2N9 1353 aa31.23■■■□□ 2.59
SNRNP70-204ENST00000595231 HDGFL2Q7Z4V5 671 aaPredicted RBP31.22■■■□□ 2.59
SNRNP70-204ENST00000595231 SSH2Q76I76 1423 aa31.21■■■□□ 2.59
SNRNP70-204ENST00000595231 KTN1Q86UP2 1357 aaKnown RBP31.21■■■□□ 2.59
SNRNP70-204ENST00000595231 MON2Q7Z3U7 1717 aa31.21■■■□□ 2.59
SNRNP70-204ENST00000595231 TRPM3Q9HCF6 1732 aaPredicted RBP31.21■■■□□ 2.59
SNRNP70-204ENST00000595231 ZNF316A6NFI3 1004 aaPredicted RBP31.19■■■□□ 2.58
SNRNP70-204ENST00000595231 SBNO1A3KN83 1393 aa31.18■■■□□ 2.58
SNRNP70-204ENST00000595231 LRRC59Q96AG4 307 aaKnown RBP31.18■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms