RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 JCADQ9P266 1359 aa26.9■■□□□ 1.9
SHKBP1-202ENST00000593764 DDX17Q92841 729 aaKnown RBP26.88■■□□□ 1.89
SHKBP1-202ENST00000593764 ORAI2Q96SN7 254 aa26.88■■□□□ 1.89
SHKBP1-202ENST00000593764 CDC42BPGQ6DT37 1551 aa26.87■■□□□ 1.89
SHKBP1-202ENST00000593764 SIN3AQ96ST3 1273 aa26.85■■□□□ 1.89
SHKBP1-202ENST00000593764 NHSL1Q5SYE7 1610 aa26.84■■□□□ 1.89
SHKBP1-202ENST00000593764 PRAM1Q96QH2 718 aa26.84■■□□□ 1.89
SHKBP1-202ENST00000593764 TRAK1Q9UPV9 953 aa26.83■■□□□ 1.89
SHKBP1-202ENST00000593764 DLC1Q96QB1 1528 aa26.83■■□□□ 1.89
SHKBP1-202ENST00000593764 PHF23Q9BUL5 403 aaPredicted RBP26.82■■□□□ 1.88
SHKBP1-202ENST00000593764 SAFB2Q14151 953 aaKnown RBP eCLIP26.81■■□□□ 1.88
SHKBP1-202ENST00000593764 RGS17Q9UGC6 210 aaPredicted RBP26.8■■□□□ 1.88
SHKBP1-202ENST00000593764 NUTM2FA1L443 756 aa26.79■■□□□ 1.88
SHKBP1-202ENST00000593764 ESCO1Q5FWF5 840 aa26.79■■□□□ 1.88
SHKBP1-202ENST00000593764 L3MBTL2Q969R5 705 aa26.78■■□□□ 1.88
SHKBP1-202ENST00000593764 LRRC59Q96AG4 307 aaKnown RBP26.78■■□□□ 1.88
SHKBP1-202ENST00000593764 POGKQ9P215 609 aa26.78■■□□□ 1.88
SHKBP1-202ENST00000593764 SPATA31A6Q5VVP1 1343 aa26.77■■□□□ 1.88
SHKBP1-202ENST00000593764 SOS2Q07890 1332 aaPredicted RBP26.76■■□□□ 1.87
SHKBP1-202ENST00000593764 NEUROD1Q13562 356 aa26.76■■□□□ 1.87
SHKBP1-202ENST00000593764 SHPRHQ149N8 1683 aa26.76■■□□□ 1.87
SHKBP1-202ENST00000593764 FMN2Q9NZ56 1722 aa26.74■■□□□ 1.87
SHKBP1-202ENST00000593764 NBPF1Q3BBV0 1214 aa26.74■■□□□ 1.87
SHKBP1-202ENST00000593764 LRP6O75581 1613 aa26.72■■□□□ 1.87
SHKBP1-202ENST00000593764 KIAA1210Q9ULL0 1709 aa26.71■■□□□ 1.87
SHKBP1-202ENST00000593764 FOXO3O43524 673 aa26.71■■□□□ 1.87
SHKBP1-202ENST00000593764 PNPLA6Q8IY17 1366 aa26.71■■□□□ 1.87
SHKBP1-202ENST00000593764 NPHP3Q7Z494 1330 aa26.69■■□□□ 1.86
SHKBP1-202ENST00000593764 HIRIP3Q9BW71 556 aaPredicted RBP26.69■■□□□ 1.86
SHKBP1-202ENST00000593764 MINK1Q8N4C8 1332 aaPredicted RBP26.68■■□□□ 1.86
SHKBP1-202ENST00000593764 ADGRB2O60241 1585 aa26.67■■□□□ 1.86
SHKBP1-202ENST00000593764 NUTM2BA6NNL0 878 aaPredicted RBP26.66■■□□□ 1.86
SHKBP1-202ENST00000593764 NUTM2EB1AL46 878 aaPredicted RBP26.66■■□□□ 1.86
SHKBP1-202ENST00000593764 NUTM2AQ8IVF1 878 aaPredicted RBP26.66■■□□□ 1.86
SHKBP1-202ENST00000593764 PXDNQ92626 1479 aa26.66■■□□□ 1.86
SHKBP1-202ENST00000593764 ARHGEF28Q8N1W1 1705 aaKnown RBP26.65■■□□□ 1.86
SHKBP1-202ENST00000593764 XPCQ01831 940 aaPredicted RBP26.65■■□□□ 1.86
SHKBP1-202ENST00000593764 RGPD8O14715 1765 aaPredicted RBP26.64■■□□□ 1.86
SHKBP1-202ENST00000593764 SOCS7O14512 581 aa26.64■■□□□ 1.86
SHKBP1-202ENST00000593764 POTEAQ6S8J7 498 aa26.64■■□□□ 1.86
SHKBP1-202ENST00000593764 WASLO00401 505 aaPredicted RBP26.63■■□□□ 1.85
SHKBP1-202ENST00000593764 PHF8Q9UPP1 1060 aa26.63■■□□□ 1.85
SHKBP1-202ENST00000593764 MEX3CQ5U5Q3 659 aaKnown RBP26.62■■□□□ 1.85
SHKBP1-202ENST00000593764 ANKARQ7Z5J8 1434 aa26.62■■□□□ 1.85
SHKBP1-202ENST00000593764 USP32Q8NFA0 1604 aa26.61■■□□□ 1.85
SHKBP1-202ENST00000593764 PRR36Q9H6K5 1346 aa26.6■■□□□ 1.85
SHKBP1-202ENST00000593764 KIF1AQ12756 1690 aa26.59■■□□□ 1.85
SHKBP1-202ENST00000593764 KRT28Q7Z3Y7 464 aa26.58■■□□□ 1.85
SHKBP1-202ENST00000593764 NBPF8Q3BBV2 869 aa26.56■■□□□ 1.84
SHKBP1-202ENST00000593764 PMFBP1Q8TBY8 1022 aa26.56■■□□□ 1.84
SHKBP1-202ENST00000593764 TULP4Q9NRJ4 1543 aa26.55■■□□□ 1.84
SHKBP1-202ENST00000593764 EIF3AQ14152 1382 aaKnown RBP26.55■■□□□ 1.84
SHKBP1-202ENST00000593764 SPATA31A3Q5VYP0 1347 aa26.54■■□□□ 1.84
SHKBP1-202ENST00000593764 TRPM1Q7Z4N2 1603 aa26.54■■□□□ 1.84
SHKBP1-202ENST00000593764 COL22A1Q8NFW1 1626 aaPredicted RBP26.53■■□□□ 1.84
SHKBP1-202ENST00000593764 CDK19Q9BWU1 502 aa26.52■■□□□ 1.84
SHKBP1-202ENST00000593764 CENPJQ9HC77 1338 aaPredicted RBP26.51■■□□□ 1.83
SHKBP1-202ENST00000593764 ADAMTS2O95450 1211 aa26.51■■□□□ 1.83
SHKBP1-202ENST00000593764 PSME1Q06323 249 aa26.51■■□□□ 1.83
SHKBP1-202ENST00000593764 ZNF772Q68DY9 489 aaPredicted RBP26.51■■□□□ 1.83
SHKBP1-202ENST00000593764 NUDT16Q96DE0 195 aaKnown RBP26.5■■□□□ 1.83
SHKBP1-202ENST00000593764 C8orf37Q96NL8 207 aa26.5■■□□□ 1.83
SHKBP1-202ENST00000593764 ROCK2O75116 1388 aaKnown RBP26.49■■□□□ 1.83
SHKBP1-202ENST00000593764 AFF2P51816 1311 aa26.49■■□□□ 1.83
SHKBP1-202ENST00000593764 ATP7BP35670 1465 aa26.49■■□□□ 1.83
SHKBP1-202ENST00000593764 TONSLQ96HA7 1378 aa26.48■■□□□ 1.83
SHKBP1-202ENST00000593764 SBNO1A3KN83 1393 aa26.47■■□□□ 1.83
SHKBP1-202ENST00000593764 PCGF6Q9BYE7 350 aa26.46■■□□□ 1.83
SHKBP1-202ENST00000593764 TNS3Q68CZ2 1445 aa26.46■■□□□ 1.83
SHKBP1-202ENST00000593764 GPRASP1Q5JY77 1395 aa26.46■■□□□ 1.83
SHKBP1-202ENST00000593764 NGLY1Q96IV0 654 aa26.44■■□□□ 1.82
SHKBP1-202ENST00000593764 NGDNQ8NEJ9 315 aaKnown RBP26.42■■□□□ 1.82
SHKBP1-202ENST00000593764 CCDC61Q9Y6R9 512 aa26.42■■□□□ 1.82
SHKBP1-202ENST00000593764 FNBP4Q8N3X1 1017 aaPredicted RBP26.4■■□□□ 1.82
SHKBP1-202ENST00000593764 QRICH2Q9H0J4 1663 aa26.4■■□□□ 1.82
SHKBP1-202ENST00000593764 TRPM3Q9HCF6 1732 aaPredicted RBP26.39■■□□□ 1.81
SHKBP1-202ENST00000593764 ARHGEF10O15013 1369 aa26.38■■□□□ 1.81
SHKBP1-202ENST00000593764 PLEKHG3A1L390 1219 aa26.38■■□□□ 1.81
SHKBP1-202ENST00000593764 LMOD2Q6P5Q4 547 aa26.38■■□□□ 1.81
SHKBP1-202ENST00000593764 CABLES1Q8TDN4 633 aa26.38■■□□□ 1.81
SHKBP1-202ENST00000593764 QTRT2Q9H974 415 aaKnown RBP26.38■■□□□ 1.81
SHKBP1-202ENST00000593764 CABP2Q9NPB3 220 aa26.38■■□□□ 1.81
SHKBP1-202ENST00000593764 ITSN1Q15811 1721 aa26.38■■□□□ 1.81
SHKBP1-202ENST00000593764 SRPK2P78362 688 aaKnown RBP26.37■■□□□ 1.81
SHKBP1-202ENST00000593764 RALGAPBQ86X10 1494 aa26.36■■□□□ 1.81
SHKBP1-202ENST00000593764 POLR3AO14802 1390 aaPredicted RBP26.36■■□□□ 1.81
SHKBP1-202ENST00000593764 TOPAZ1Q8N9V7 1692 aa26.36■■□□□ 1.81
SHKBP1-202ENST00000593764 RXRBP28702 533 aa26.36■■□□□ 1.81
SHKBP1-202ENST00000593764 CARD11Q9BXL7 1154 aa26.36■■□□□ 1.81
SHKBP1-202ENST00000593764 ACEP12821 1306 aa26.36■■□□□ 1.81
SHKBP1-202ENST00000593764 USP21Q9UK80 565 aa26.35■■□□□ 1.81
SHKBP1-202ENST00000593764 ALS2Q96Q42 1657 aa26.33■■□□□ 1.81
SHKBP1-202ENST00000593764 MARF1Q9Y4F3 1742 aaKnown RBP26.33■■□□□ 1.81
SHKBP1-202ENST00000593764 EVC2Q86UK5 1308 aa26.33■■□□□ 1.81
SHKBP1-202ENST00000593764 PLEKHG5O94827 1062 aa26.32■■□□□ 1.8
SHKBP1-202ENST00000593764 BCL9LQ86UU0 1499 aa26.31■■□□□ 1.8
SHKBP1-202ENST00000593764 PAK3O75914 559 aaPredicted RBP26.31■■□□□ 1.8
SHKBP1-202ENST00000593764 PPIP5K1Q6PFW1 1433 aa26.31■■□□□ 1.8
SHKBP1-202ENST00000593764 CLSPNQ9HAW4 1339 aa26.3■■□□□ 1.8
SHKBP1-202ENST00000593764 RBM6P78332 1123 aaKnown RBP26.29■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms