RNA–Protein interactions for RNA: ENST00000592391.5

DDX39A-217, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,080 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-217ENST00000592391 NEUROD1Q13562 356 aa20.99■□□□□ 0.95
DDX39A-217ENST00000592391 L3MBTL2Q969R5 705 aa20.99■□□□□ 0.95
DDX39A-217ENST00000592391 PRAM1Q96QH2 718 aa20.98■□□□□ 0.95
DDX39A-217ENST00000592391 COL16A1Q07092 1604 aaPredicted RBP20.97■□□□□ 0.95
DDX39A-217ENST00000592391 TRAK1Q9UPV9 953 aa20.97■□□□□ 0.95
DDX39A-217ENST00000592391 MED1Q15648 1581 aaPredicted RBP20.97■□□□□ 0.95
DDX39A-217ENST00000592391 POGKQ9P215 609 aa20.95■□□□□ 0.94
DDX39A-217ENST00000592391 KIAA1210Q9ULL0 1709 aa20.95■□□□□ 0.94
DDX39A-217ENST00000592391 JCADQ9P266 1359 aa20.94■□□□□ 0.94
DDX39A-217ENST00000592391 SAFB2Q14151 953 aaKnown RBP eCLIP20.93■□□□□ 0.94
DDX39A-217ENST00000592391 ORAI2Q96SN7 254 aa20.93■□□□□ 0.94
DDX39A-217ENST00000592391 NHSL1Q5SYE7 1610 aa20.93■□□□□ 0.94
DDX39A-217ENST00000592391 NBPF1Q3BBV0 1214 aa20.9■□□□□ 0.94
DDX39A-217ENST00000592391 DDX17Q92841 729 aaKnown RBP20.9■□□□□ 0.94
DDX39A-217ENST00000592391 FMN2Q9NZ56 1722 aa20.9■□□□□ 0.94
DDX39A-217ENST00000592391 NUTM2FA1L443 756 aa20.89■□□□□ 0.93
DDX39A-217ENST00000592391 ESCO1Q5FWF5 840 aa20.89■□□□□ 0.93
DDX39A-217ENST00000592391 PCGF6Q9BYE7 350 aa20.89■□□□□ 0.93
DDX39A-217ENST00000592391 ADGRB2O60241 1585 aa20.88■□□□□ 0.93
DDX39A-217ENST00000592391 ARHGEF28Q8N1W1 1705 aaKnown RBP20.87■□□□□ 0.93
DDX39A-217ENST00000592391 LRRC59Q96AG4 307 aaKnown RBP20.86■□□□□ 0.93
DDX39A-217ENST00000592391 SOS2Q07890 1332 aaPredicted RBP20.85■□□□□ 0.93
DDX39A-217ENST00000592391 MINK1Q8N4C8 1332 aaPredicted RBP20.85■□□□□ 0.93
DDX39A-217ENST00000592391 TONSLQ96HA7 1378 aa20.85■□□□□ 0.93
DDX39A-217ENST00000592391 SPATA31A6Q5VVP1 1343 aa20.84■□□□□ 0.93
DDX39A-217ENST00000592391 SHPRHQ149N8 1683 aa20.84■□□□□ 0.93
DDX39A-217ENST00000592391 PHF23Q9BUL5 403 aaPredicted RBP20.84■□□□□ 0.93
DDX39A-217ENST00000592391 HIRIP3Q9BW71 556 aaPredicted RBP20.84■□□□□ 0.93
DDX39A-217ENST00000592391 NPHP3Q7Z494 1330 aa20.83■□□□□ 0.93
DDX39A-217ENST00000592391 TRPM1Q7Z4N2 1603 aa20.82■□□□□ 0.92
DDX39A-217ENST00000592391 ANKARQ7Z5J8 1434 aa20.82■□□□□ 0.92
DDX39A-217ENST00000592391 WASLO00401 505 aaPredicted RBP20.81■□□□□ 0.92
DDX39A-217ENST00000592391 FOXO3O43524 673 aa20.81■□□□□ 0.92
DDX39A-217ENST00000592391 EIF3AQ14152 1382 aaKnown RBP20.81■□□□□ 0.92
DDX39A-217ENST00000592391 PNPLA6Q8IY17 1366 aa20.8■□□□□ 0.92
DDX39A-217ENST00000592391 KIF1AQ12756 1690 aa20.8■□□□□ 0.92
DDX39A-217ENST00000592391 NBPF8Q3BBV2 869 aa20.79■□□□□ 0.92
DDX39A-217ENST00000592391 PHF8Q9UPP1 1060 aa20.79■□□□□ 0.92
DDX39A-217ENST00000592391 ROCK2O75116 1388 aaKnown RBP20.79■□□□□ 0.92
DDX39A-217ENST00000592391 PXDNQ92626 1479 aa20.79■□□□□ 0.92
DDX39A-217ENST00000592391 ILDR2Q71H61 639 aa20.78■□□□□ 0.92
DDX39A-217ENST00000592391 LRP6O75581 1613 aa20.78■□□□□ 0.92
DDX39A-217ENST00000592391 USP32Q8NFA0 1604 aa20.78■□□□□ 0.92
DDX39A-217ENST00000592391 TULP4Q9NRJ4 1543 aa20.78■□□□□ 0.92
DDX39A-217ENST00000592391 CENPJQ9HC77 1338 aaPredicted RBP20.77■□□□□ 0.91
DDX39A-217ENST00000592391 XPCQ01831 940 aaPredicted RBP20.76■□□□□ 0.91
DDX39A-217ENST00000592391 RGPD8O14715 1765 aaPredicted RBP20.76■□□□□ 0.91
DDX39A-217ENST00000592391 PRR36Q9H6K5 1346 aa20.76■□□□□ 0.91
DDX39A-217ENST00000592391 GPRASP1Q5JY77 1395 aa20.75■□□□□ 0.91
DDX39A-217ENST00000592391 RGS17Q9UGC6 210 aaPredicted RBP20.74■□□□□ 0.91
DDX39A-217ENST00000592391 CLSPNQ9HAW4 1339 aa20.74■□□□□ 0.91
DDX39A-217ENST00000592391 NUTM2BA6NNL0 878 aaPredicted RBP20.73■□□□□ 0.91
DDX39A-217ENST00000592391 NUTM2EB1AL46 878 aaPredicted RBP20.73■□□□□ 0.91
DDX39A-217ENST00000592391 MEX3CQ5U5Q3 659 aaKnown RBP20.73■□□□□ 0.91
DDX39A-217ENST00000592391 NUTM2AQ8IVF1 878 aaPredicted RBP20.73■□□□□ 0.91
DDX39A-217ENST00000592391 CDK19Q9BWU1 502 aa20.73■□□□□ 0.91
DDX39A-217ENST00000592391 KRT28Q7Z3Y7 464 aa20.72■□□□□ 0.91
DDX39A-217ENST00000592391 PMFBP1Q8TBY8 1022 aa20.72■□□□□ 0.91
DDX39A-217ENST00000592391 RALGAPBQ86X10 1494 aa20.72■□□□□ 0.91
DDX39A-217ENST00000592391 ATP7BP35670 1465 aa20.71■□□□□ 0.91
DDX39A-217ENST00000592391 NUDT16Q96DE0 195 aaKnown RBP20.7■□□□□ 0.9
DDX39A-217ENST00000592391 COL22A1Q8NFW1 1626 aaPredicted RBP20.69■□□□□ 0.9
DDX39A-217ENST00000592391 PSME1Q06323 249 aa20.69■□□□□ 0.9
DDX39A-217ENST00000592391 CARD11Q9BXL7 1154 aa20.69■□□□□ 0.9
DDX39A-217ENST00000592391 QRICH2Q9H0J4 1663 aa20.69■□□□□ 0.9
DDX39A-217ENST00000592391 SPATA31A3Q5VYP0 1347 aa20.69■□□□□ 0.9
DDX39A-217ENST00000592391 SBNO1A3KN83 1393 aa20.67■□□□□ 0.9
DDX39A-217ENST00000592391 CCDC61Q9Y6R9 512 aa20.66■□□□□ 0.9
DDX39A-217ENST00000592391 TNS3Q68CZ2 1445 aa20.66■□□□□ 0.9
DDX39A-217ENST00000592391 ITSN1Q15811 1721 aa20.66■□□□□ 0.9
DDX39A-217ENST00000592391 SRPK2P78362 688 aaKnown RBP20.65■□□□□ 0.9
DDX39A-217ENST00000592391 NGDNQ8NEJ9 315 aaKnown RBP20.65■□□□□ 0.9
DDX39A-217ENST00000592391 TIMELESSQ9UNS1 1208 aa20.65■□□□□ 0.9
DDX39A-217ENST00000592391 POTEAQ6S8J7 498 aa20.64■□□□□ 0.89
DDX39A-217ENST00000592391 ADAMTS2O95450 1211 aa20.63■□□□□ 0.89
DDX39A-217ENST00000592391 CCER1Q8TC90 406 aaPredicted RBP20.63■□□□□ 0.89
DDX39A-217ENST00000592391 CABP2Q9NPB3 220 aa20.63■□□□□ 0.89
DDX39A-217ENST00000592391 TOPAZ1Q8N9V7 1692 aa20.63■□□□□ 0.89
DDX39A-217ENST00000592391 EVC2Q86UK5 1308 aa20.62■□□□□ 0.89
DDX39A-217ENST00000592391 ZNF772Q68DY9 489 aaPredicted RBP20.62■□□□□ 0.89
DDX39A-217ENST00000592391 C8orf37Q96NL8 207 aa20.62■□□□□ 0.89
DDX39A-217ENST00000592391 ARHGEF10O15013 1369 aa20.61■□□□□ 0.89
DDX39A-217ENST00000592391 PLEKHG3A1L390 1219 aa20.61■□□□□ 0.89
DDX39A-217ENST00000592391 POLR3AO14802 1390 aaPredicted RBP20.6■□□□□ 0.89
DDX39A-217ENST00000592391 SBNO2Q9Y2G9 1366 aa20.6■□□□□ 0.89
DDX39A-217ENST00000592391 AFF2P51816 1311 aa20.6■□□□□ 0.89
DDX39A-217ENST00000592391 TRPM3Q9HCF6 1732 aaPredicted RBP20.6■□□□□ 0.89
DDX39A-217ENST00000592391 LMOD2Q6P5Q4 547 aa20.59■□□□□ 0.89
DDX39A-217ENST00000592391 PPIP5K1Q6PFW1 1433 aa20.59■□□□□ 0.89
DDX39A-217ENST00000592391 ACEP12821 1306 aa20.58■□□□□ 0.89
DDX39A-217ENST00000592391 NGLY1Q96IV0 654 aa20.58■□□□□ 0.89
DDX39A-217ENST00000592391 SOCS7O14512 581 aa20.57■□□□□ 0.88
DDX39A-217ENST00000592391 ALS2Q96Q42 1657 aa20.55■□□□□ 0.88
DDX39A-217ENST00000592391 PAK3O75914 559 aaPredicted RBP20.55■□□□□ 0.88
DDX39A-217ENST00000592391 FNBP4Q8N3X1 1017 aaPredicted RBP20.54■□□□□ 0.88
DDX39A-217ENST00000592391 CABLES1Q8TDN4 633 aa20.54■□□□□ 0.88
DDX39A-217ENST00000592391 CABP1Q9NZU7 370 aa20.54■□□□□ 0.88
DDX39A-217ENST00000592391 HAP1P54257 671 aaPredicted RBP20.53■□□□□ 0.88
DDX39A-217ENST00000592391 ATAD2Q6PL18 1390 aa20.52■□□□□ 0.88
DDX39A-217ENST00000592391 MARF1Q9Y4F3 1742 aaKnown RBP20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms