RNA–Protein interactions for RNA: ENST00000591662.1

CNTNAP1-204, Transcript of contactin associated protein 1, humanhuman

TSL 1 (best)

Gene CNTNAP1, Length 4,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1-204ENST00000591662 TRIM6-TRIM34B2RNG4 842 aa13.41□□□□□ -0.26
CNTNAP1-204ENST00000591662 TPM4P67936 248 aa13.41□□□□□ -0.26
CNTNAP1-204ENST00000591662 SASS6Q6UVJ0 657 aa13.41□□□□□ -0.26
CNTNAP1-204ENST00000591662 GRIN2BQ13224 1484 aa13.41□□□□□ -0.26
CNTNAP1-204ENST00000591662 PRPF40AO75400 957 aaKnown RBP13.4□□□□□ -0.26
CNTNAP1-204ENST00000591662 CHMP4AQ9BY43 222 aa13.39□□□□□ -0.27
CNTNAP1-204ENST00000591662 DYNC1I1O14576 645 aa13.39□□□□□ -0.27
CNTNAP1-204ENST00000591662 NBPF1Q3BBV0 1214 aa13.39□□□□□ -0.27
CNTNAP1-204ENST00000591662 DHX29Q7Z478 1369 aaKnown RBP13.38□□□□□ -0.27
CNTNAP1-204ENST00000591662 NUTM2FA1L443 756 aa13.38□□□□□ -0.27
CNTNAP1-204ENST00000591662 RNF214Q8ND24 703 aa13.38□□□□□ -0.27
CNTNAP1-204ENST00000591662 DNMBPQ6XZF7 1577 aa13.38□□□□□ -0.27
CNTNAP1-204ENST00000591662 PTPRKQ15262 1439 aa13.38□□□□□ -0.27
CNTNAP1-204ENST00000591662 VGFO15240 615 aaPredicted RBP13.38□□□□□ -0.27
CNTNAP1-204ENST00000591662 FAM184AQ8NB25 1140 aa13.38□□□□□ -0.27
CNTNAP1-204ENST00000591662 RRAGDQ9NQL2 400 aaPredicted RBP13.38□□□□□ -0.27
CNTNAP1-204ENST00000591662 CFAP43Q8NDM7 1665 aa13.38□□□□□ -0.27
CNTNAP1-204ENST00000591662 NOL8Q76FK4 1167 aaKnown RBP13.38□□□□□ -0.27
CNTNAP1-204ENST00000591662 TEX35Q5T0J7 233 aa13.37□□□□□ -0.27
CNTNAP1-204ENST00000591662 TNPO1Q92973 898 aaKnown RBP13.37□□□□□ -0.27
CNTNAP1-204ENST00000591662 GOLGA6L19H0YKK7 550 aa13.37□□□□□ -0.27
CNTNAP1-204ENST00000591662 PARD3Q8TEW0 1356 aa13.36□□□□□ -0.27
CNTNAP1-204ENST00000591662 ABCA10Q8WWZ4 1543 aa13.36□□□□□ -0.27
CNTNAP1-204ENST00000591662 INSRP06213 1382 aa13.36□□□□□ -0.27
CNTNAP1-204ENST00000591662 HS1BP3Q53T59 392 aa13.36□□□□□ -0.27
CNTNAP1-204ENST00000591662 TAOK2Q9UL54 1235 aa13.36□□□□□ -0.27
CNTNAP1-204ENST00000591662 PRDM2Q13029 1718 aa13.36□□□□□ -0.27
CNTNAP1-204ENST00000591662 STK31Q9BXU1 1019 aa13.35□□□□□ -0.27
CNTNAP1-204ENST00000591662 NAP1L2Q9ULW6 460 aaPredicted RBP13.35□□□□□ -0.27
CNTNAP1-204ENST00000591662 KIF3AQ9Y496 699 aa13.35□□□□□ -0.27
CNTNAP1-204ENST00000591662 EPRSP07814 1512 aaKnown RBP13.35□□□□□ -0.27
CNTNAP1-204ENST00000591662 WWC1Q8IX03 1113 aa13.35□□□□□ -0.27
CNTNAP1-204ENST00000591662 RIPK4P57078 832 aa13.35□□□□□ -0.27
CNTNAP1-204ENST00000591662 KLHL40Q2TBA0 621 aa13.35□□□□□ -0.27
CNTNAP1-204ENST00000591662 ATF7IPQ6VMQ6 1270 aa13.35□□□□□ -0.27
CNTNAP1-204ENST00000591662 PANK2Q9BZ23 570 aa13.35□□□□□ -0.27
CNTNAP1-204ENST00000591662 THOC2Q8NI27 1593 aaKnown RBP13.35□□□□□ -0.27
CNTNAP1-204ENST00000591662 EVC2Q86UK5 1308 aa13.35□□□□□ -0.27
CNTNAP1-204ENST00000591662 AMPHP49418 695 aa13.35□□□□□ -0.27
CNTNAP1-204ENST00000591662 RALGAPBQ86X10 1494 aa13.34□□□□□ -0.27
CNTNAP1-204ENST00000591662 CHD1LQ86WJ1 897 aa13.34□□□□□ -0.27
CNTNAP1-204ENST00000591662 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.34□□□□□ -0.27
CNTNAP1-204ENST00000591662 GPS2Q13227 327 aa13.34□□□□□ -0.27
CNTNAP1-204ENST00000591662 KDM2BQ8NHM5 1336 aa13.34□□□□□ -0.27
CNTNAP1-204ENST00000591662 CUL7Q14999 1698 aa13.34□□□□□ -0.27
CNTNAP1-204ENST00000591662 ABCC5O15440 1437 aa13.34□□□□□ -0.27
CNTNAP1-204ENST00000591662 PDCL2Q8N4E4 241 aa13.34□□□□□ -0.27
CNTNAP1-204ENST00000591662 ZNF330Q9Y3S2 320 aaPredicted RBP13.33□□□□□ -0.27
CNTNAP1-204ENST00000591662 C9orf84Q5VXU9 1444 aa13.33□□□□□ -0.28
CNTNAP1-204ENST00000591662 RARSP54136 660 aaKnown RBP13.33□□□□□ -0.28
CNTNAP1-204ENST00000591662 IGHDP01880 384 aa13.33□□□□□ -0.28
CNTNAP1-204ENST00000591662 TERF1P54274 439 aa13.33□□□□□ -0.28
CNTNAP1-204ENST00000591662 OFD1O75665 1012 aa13.33□□□□□ -0.28
CNTNAP1-204ENST00000591662 TROQ12816 1431 aaPredicted RBP13.32□□□□□ -0.28
CNTNAP1-204ENST00000591662 GPATCH3Q96I76 525 aa13.32□□□□□ -0.28
CNTNAP1-204ENST00000591662 IFT57Q9NWB7 429 aa13.32□□□□□ -0.28
CNTNAP1-204ENST00000591662 MRC2Q9UBG0 1479 aa13.32□□□□□ -0.28
CNTNAP1-204ENST00000591662 BECN2A8MW95 431 aa13.32□□□□□ -0.28
CNTNAP1-204ENST00000591662 HDAC5Q9UQL6 1122 aa13.32□□□□□ -0.28
CNTNAP1-204ENST00000591662 DIAPH1O60610 1272 aaKnown RBP13.32□□□□□ -0.28
CNTNAP1-204ENST00000591662 GNAI1P63096 354 aa13.32□□□□□ -0.28
CNTNAP1-204ENST00000591662 FOXD4L6Q3SYB3 417 aaPredicted RBP13.32□□□□□ -0.28
CNTNAP1-204ENST00000591662 FOXD4L3Q6VB84 417 aaPredicted RBP13.32□□□□□ -0.28
CNTNAP1-204ENST00000591662 GOLGA6L1Q8N7Z2 621 aa13.32□□□□□ -0.28
CNTNAP1-204ENST00000591662 PRG4Q92954 1404 aaPredicted RBP13.31□□□□□ -0.28
CNTNAP1-204ENST00000591662 EXOSC9Q06265 439 aaKnown RBP13.31□□□□□ -0.28
CNTNAP1-204ENST00000591662 ZNF428Q96B54 188 aa13.31□□□□□ -0.28
CNTNAP1-204ENST00000591662 ARGLU1Q9NWB6 273 aaPredicted RBP13.31□□□□□ -0.28
CNTNAP1-204ENST00000591662 GPRASP1Q5JY77 1395 aa13.31□□□□□ -0.28
CNTNAP1-204ENST00000591662 ZNF592Q92610 1267 aa13.31□□□□□ -0.28
CNTNAP1-204ENST00000591662 RILPL2Q969X0 211 aa13.31□□□□□ -0.28
CNTNAP1-204ENST00000591662 LTV1Q96GA3 475 aaPredicted RBP13.31□□□□□ -0.28
CNTNAP1-204ENST00000591662 MTHFSP49914 203 aa13.3□□□□□ -0.28
CNTNAP1-204ENST00000591662 SNX21Q969T3 373 aa13.3□□□□□ -0.28
CNTNAP1-204ENST00000591662 PRIMPOLQ96LW4 560 aa13.3□□□□□ -0.28
CNTNAP1-204ENST00000591662 XPCQ01831 940 aaPredicted RBP13.29□□□□□ -0.28
CNTNAP1-204ENST00000591662 ANO2Q9NQ90 1003 aa13.29□□□□□ -0.28
CNTNAP1-204ENST00000591662 SMC3Q9UQE7 1217 aa13.29□□□□□ -0.28
CNTNAP1-204ENST00000591662 UGGT2Q9NYU1 1516 aa13.29□□□□□ -0.28
CNTNAP1-204ENST00000591662 NEK4P51957 841 aa13.29□□□□□ -0.28
CNTNAP1-204ENST00000591662 NOB1Q9ULX3 412 aaKnown RBP13.29□□□□□ -0.28
CNTNAP1-204ENST00000591662 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.29□□□□□ -0.28
CNTNAP1-204ENST00000591662 SLC4A10Q6U841 1118 aa13.28□□□□□ -0.28
CNTNAP1-204ENST00000591662 WDR33Q9C0J8 1336 aaKnown RBP13.28□□□□□ -0.28
CNTNAP1-204ENST00000591662 CDK13Q14004 1512 aaKnown RBP13.28□□□□□ -0.28
CNTNAP1-204ENST00000591662 RUFY2Q8WXA3 655 aa13.28□□□□□ -0.28
CNTNAP1-204ENST00000591662 CHMP4CQ96CF2 233 aa13.28□□□□□ -0.28
CNTNAP1-204ENST00000591662 TCOF1Q13428 1488 aaKnown RBP13.28□□□□□ -0.28
CNTNAP1-204ENST00000591662 ELL2O00472 640 aaPredicted RBP13.28□□□□□ -0.28
CNTNAP1-204ENST00000591662 SNAPC4Q5SXM2 1469 aa13.27□□□□□ -0.28
CNTNAP1-204ENST00000591662 CCDC9Q9Y3X0 531 aaKnown RBP13.27□□□□□ -0.29
CNTNAP1-204ENST00000591662 IFT140Q96RY7 1462 aa13.27□□□□□ -0.29
CNTNAP1-204ENST00000591662 BAG4O95429 457 aaKnown RBP13.27□□□□□ -0.29
CNTNAP1-204ENST00000591662 SMAP1Q8IYB5 467 aaPredicted RBP13.26□□□□□ -0.29
CNTNAP1-204ENST00000591662 MINK1Q8N4C8 1332 aaPredicted RBP13.26□□□□□ -0.29
CNTNAP1-204ENST00000591662 SSFA2P28290 1259 aa13.26□□□□□ -0.29
CNTNAP1-204ENST00000591662 FAM69CQ0P6D2 419 aa13.26□□□□□ -0.29
CNTNAP1-204ENST00000591662 SYCE3A1L190 88 aa13.26□□□□□ -0.29
CNTNAP1-204ENST00000591662 ERC2O15083 957 aa13.26□□□□□ -0.29
CNTNAP1-204ENST00000591662 BMP2KLQ5H9B9 411 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms