RNA–Protein interactions for RNA: ENST00000591510.1

PRKCSH-213, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 591 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-213ENST00000591510 C14orf37Q86TY3 774 aa23.04■■□□□ 1.28
PRKCSH-213ENST00000591510 CADPS2Q86UW7 1296 aa23.04■■□□□ 1.28
PRKCSH-213ENST00000591510 RALGAPBQ86X10 1494 aa23.04■■□□□ 1.28
PRKCSH-213ENST00000591510 PIP4K2BP78356 416 aa23.02■■□□□ 1.28
PRKCSH-213ENST00000591510 PRAM1Q96QH2 718 aa23.02■■□□□ 1.28
PRKCSH-213ENST00000591510 SLAIN2Q9P270 581 aa23.02■■□□□ 1.28
PRKCSH-213ENST00000591510 TRAK1Q9UPV9 953 aa23.02■■□□□ 1.28
PRKCSH-213ENST00000591510 CCER1Q8TC90 406 aaPredicted RBP23.01■■□□□ 1.27
PRKCSH-213ENST00000591510 FMN2Q9NZ56 1722 aa23.01■■□□□ 1.27
PRKCSH-213ENST00000591510 ATF3P18847 181 aa23■■□□□ 1.27
PRKCSH-213ENST00000591510 C1orf167Q5SNV9 1468 aa22.98■■□□□ 1.27
PRKCSH-213ENST00000591510 TIMELESSQ9UNS1 1208 aa22.98■■□□□ 1.27
PRKCSH-213ENST00000591510 ROCK2O75116 1388 aaKnown RBP22.96■■□□□ 1.27
PRKCSH-213ENST00000591510 AHDC1Q5TGY3 1603 aaPredicted RBP22.95■■□□□ 1.26
PRKCSH-213ENST00000591510 SCAF1Q9H7N4 1312 aaKnown RBP22.95■■□□□ 1.26
PRKCSH-213ENST00000591510 HSPA1LP34931 641 aa22.94■■□□□ 1.26
PRKCSH-213ENST00000591510 NHSL1Q5SYE7 1610 aa22.93■■□□□ 1.26
PRKCSH-213ENST00000591510 USP32Q8NFA0 1604 aa22.93■■□□□ 1.26
PRKCSH-213ENST00000591510 SAFB2Q14151 953 aaKnown RBP eCLIP22.93■■□□□ 1.26
PRKCSH-213ENST00000591510 BRINP3Q76B58 766 aa22.93■■□□□ 1.26
PRKCSH-213ENST00000591510 POGKQ9P215 609 aa22.92■■□□□ 1.26
PRKCSH-213ENST00000591510 QRICH2Q9H0J4 1663 aa22.91■■□□□ 1.26
PRKCSH-213ENST00000591510 COL16A1Q07092 1604 aaPredicted RBP22.91■■□□□ 1.26
PRKCSH-213ENST00000591510 RGPD8O14715 1765 aaPredicted RBP22.89■■□□□ 1.25
PRKCSH-213ENST00000591510 PHLPP1O60346 1717 aa22.88■■□□□ 1.25
PRKCSH-213ENST00000591510 MINK1Q8N4C8 1332 aaPredicted RBP22.87■■□□□ 1.25
PRKCSH-213ENST00000591510 ANKARQ7Z5J8 1434 aa22.87■■□□□ 1.25
PRKCSH-213ENST00000591510 TULP4Q9NRJ4 1543 aa22.87■■□□□ 1.25
PRKCSH-213ENST00000591510 CENPJQ9HC77 1338 aaPredicted RBP22.86■■□□□ 1.25
PRKCSH-213ENST00000591510 ORAI2Q96SN7 254 aa22.86■■□□□ 1.25
PRKCSH-213ENST00000591510 HIRIP3Q9BW71 556 aaPredicted RBP22.86■■□□□ 1.25
PRKCSH-213ENST00000591510 PRR36Q9H6K5 1346 aa22.84■■□□□ 1.25
PRKCSH-213ENST00000591510 ATP7BP35670 1465 aa22.84■■□□□ 1.25
PRKCSH-213ENST00000591510 WASLO00401 505 aaPredicted RBP22.83■■□□□ 1.25
PRKCSH-213ENST00000591510 CARD11Q9BXL7 1154 aa22.83■■□□□ 1.25
PRKCSH-213ENST00000591510 KIF1AQ12756 1690 aa22.83■■□□□ 1.24
PRKCSH-213ENST00000591510 TOPAZ1Q8N9V7 1692 aa22.82■■□□□ 1.24
PRKCSH-213ENST00000591510 EIF3AQ14152 1382 aaKnown RBP22.82■■□□□ 1.24
PRKCSH-213ENST00000591510 SBNO2Q9Y2G9 1366 aa22.82■■□□□ 1.24
PRKCSH-213ENST00000591510 NUTM2FA1L443 756 aa22.8■■□□□ 1.24
PRKCSH-213ENST00000591510 PXDNQ92626 1479 aa22.79■■□□□ 1.24
PRKCSH-213ENST00000591510 DDX17Q92841 729 aaKnown RBP22.78■■□□□ 1.24
PRKCSH-213ENST00000591510 ESCO1Q5FWF5 840 aa22.77■■□□□ 1.24
PRKCSH-213ENST00000591510 SOS2Q07890 1332 aaPredicted RBP22.77■■□□□ 1.24
PRKCSH-213ENST00000591510 ITSN1Q15811 1721 aa22.77■■□□□ 1.23
PRKCSH-213ENST00000591510 CDK19Q9BWU1 502 aa22.76■■□□□ 1.23
PRKCSH-213ENST00000591510 SHPRHQ149N8 1683 aa22.75■■□□□ 1.23
PRKCSH-213ENST00000591510 TESK2Q96S53 571 aa22.73■■□□□ 1.23
PRKCSH-213ENST00000591510 USP47Q96K76 1375 aa22.73■■□□□ 1.23
PRKCSH-213ENST00000591510 NUDT16Q96DE0 195 aaKnown RBP22.72■■□□□ 1.23
PRKCSH-213ENST00000591510 PHF8Q9UPP1 1060 aa22.72■■□□□ 1.23
PRKCSH-213ENST00000591510 NPHP3Q7Z494 1330 aa22.71■■□□□ 1.23
PRKCSH-213ENST00000591510 JCADQ9P266 1359 aa22.71■■□□□ 1.23
PRKCSH-213ENST00000591510 TRPM3Q9HCF6 1732 aaPredicted RBP22.7■■□□□ 1.22
PRKCSH-213ENST00000591510 FOXO3O43524 673 aa22.69■■□□□ 1.22
PRKCSH-213ENST00000591510 MED1Q15648 1581 aaPredicted RBP22.68■■□□□ 1.22
PRKCSH-213ENST00000591510 ST20-MTHFSA0A0A6YYL1 179 aa22.68■■□□□ 1.22
PRKCSH-213ENST00000591510 POLR3AO14802 1390 aaPredicted RBP22.67■■□□□ 1.22
PRKCSH-213ENST00000591510 PNPLA6Q8IY17 1366 aa22.67■■□□□ 1.22
PRKCSH-213ENST00000591510 EVC2Q86UK5 1308 aa22.67■■□□□ 1.22
PRKCSH-213ENST00000591510 CABP2Q9NPB3 220 aa22.67■■□□□ 1.22
PRKCSH-213ENST00000591510 COL22A1Q8NFW1 1626 aaPredicted RBP22.67■■□□□ 1.22
PRKCSH-213ENST00000591510 PLEKHG3A1L390 1219 aa22.65■■□□□ 1.22
PRKCSH-213ENST00000591510 PMFBP1Q8TBY8 1022 aa22.65■■□□□ 1.22
PRKCSH-213ENST00000591510 CCDC61Q9Y6R9 512 aa22.65■■□□□ 1.22
PRKCSH-213ENST00000591510 LRP6O75581 1613 aa22.64■■□□□ 1.22
PRKCSH-213ENST00000591510 XPCQ01831 940 aaPredicted RBP22.64■■□□□ 1.21
PRKCSH-213ENST00000591510 LRRC59Q96AG4 307 aaKnown RBP22.64■■□□□ 1.21
PRKCSH-213ENST00000591510 ALS2Q96Q42 1657 aa22.63■■□□□ 1.21
PRKCSH-213ENST00000591510 SRPK2P78362 688 aaKnown RBP22.63■■□□□ 1.21
PRKCSH-213ENST00000591510 PPIP5K1Q6PFW1 1433 aa22.63■■□□□ 1.21
PRKCSH-213ENST00000591510 SBNO1A3KN83 1393 aa22.63■■□□□ 1.21
PRKCSH-213ENST00000591510 SPATA31A3Q5VYP0 1347 aa22.61■■□□□ 1.21
PRKCSH-213ENST00000591510 TNS3Q68CZ2 1445 aa22.61■■□□□ 1.21
PRKCSH-213ENST00000591510 KRT28Q7Z3Y7 464 aa22.61■■□□□ 1.21
PRKCSH-213ENST00000591510 DISP3Q9P2K9 1392 aa22.61■■□□□ 1.21
PRKCSH-213ENST00000591510 ATAD2Q6PL18 1390 aa22.6■■□□□ 1.21
PRKCSH-213ENST00000591510 SPATA31A6Q5VVP1 1343 aa22.59■■□□□ 1.21
PRKCSH-213ENST00000591510 PUS7Q96PZ0 661 aaKnown RBP22.59■■□□□ 1.21
PRKCSH-213ENST00000591510 ACEP12821 1306 aa22.58■■□□□ 1.21
PRKCSH-213ENST00000591510 AKAP12Q02952 1782 aa22.58■■□□□ 1.21
PRKCSH-213ENST00000591510 CD163L1Q9NR16 1453 aa22.57■■□□□ 1.2
PRKCSH-213ENST00000591510 CABP1Q9NZU7 370 aa22.56■■□□□ 1.2
PRKCSH-213ENST00000591510 ABCA3Q99758 1704 aa22.56■■□□□ 1.2
PRKCSH-213ENST00000591510 CRYBG1Q9Y4K1 1723 aa22.56■■□□□ 1.2
PRKCSH-213ENST00000591510 CPSF1Q10570 1443 aaKnown RBP22.56■■□□□ 1.2
PRKCSH-213ENST00000591510 SSH2Q76I76 1423 aa22.56■■□□□ 1.2
PRKCSH-213ENST00000591510 NRKQ7Z2Y5 1582 aa22.55■■□□□ 1.2
PRKCSH-213ENST00000591510 NGDNQ8NEJ9 315 aaKnown RBP22.55■■□□□ 1.2
PRKCSH-213ENST00000591510 PSME1Q06323 249 aa22.54■■□□□ 1.2
PRKCSH-213ENST00000591510 HSPA5P11021 654 aaKnown RBP22.53■■□□□ 1.2
PRKCSH-213ENST00000591510 USP6P35125 1406 aa22.53■■□□□ 1.2
PRKCSH-213ENST00000591510 MON2Q7Z3U7 1717 aa22.53■■□□□ 1.2
PRKCSH-213ENST00000591510 SLC24A1O60721 1099 aa22.52■■□□□ 1.2
PRKCSH-213ENST00000591510 EIF4G2P78344 907 aaKnown RBP eCLIP22.51■■□□□ 1.19
PRKCSH-213ENST00000591510 MYOM1P52179 1685 aa22.51■■□□□ 1.19
PRKCSH-213ENST00000591510 ARHGEF10O15013 1369 aa22.5■■□□□ 1.19
PRKCSH-213ENST00000591510 BRD4O60885 1362 aaPredicted RBP22.5■■□□□ 1.19
PRKCSH-213ENST00000591510 TMF1P82094 1093 aa22.48■■□□□ 1.19
PRKCSH-213ENST00000591510 NINLQ9Y2I6 1382 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms