RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 CFAP65Q6ZU64 1925 aaKnown RBP18.34■□□□□ 0.53
RETREG3-208ENST00000589797 HSCBQ8IWL3 235 aa18.34■□□□□ 0.53
RETREG3-208ENST00000589797 NOL8Q76FK4 1167 aaKnown RBP18.34■□□□□ 0.53
RETREG3-208ENST00000589797 EMILIN1Q9Y6C2 1016 aa18.33■□□□□ 0.52
RETREG3-208ENST00000589797 LMOD3Q0VAK6 560 aa18.32■□□□□ 0.52
RETREG3-208ENST00000589797 KDM5BQ9UGL1 1544 aa18.32■□□□□ 0.52
RETREG3-208ENST00000589797 DUSP27Q5VZP5 1158 aa18.31■□□□□ 0.52
RETREG3-208ENST00000589797 ABTB2Q8N961 1025 aa18.31■□□□□ 0.52
RETREG3-208ENST00000589797 NUDT16Q96DE0 195 aaKnown RBP18.31■□□□□ 0.52
RETREG3-208ENST00000589797 MIS18AQ9NYP9 233 aa18.31■□□□□ 0.52
RETREG3-208ENST00000589797 NOB1Q9ULX3 412 aaKnown RBP18.31■□□□□ 0.52
RETREG3-208ENST00000589797 DNMT1P26358 1616 aaKnown RBP18.31■□□□□ 0.52
RETREG3-208ENST00000589797 MSH5O43196 834 aa18.31■□□□□ 0.52
RETREG3-208ENST00000589797 TEX14Q8IWB6 1497 aa18.3■□□□□ 0.52
RETREG3-208ENST00000589797 ANP32BQ92688 251 aaKnown RBP18.3■□□□□ 0.52
RETREG3-208ENST00000589797 TRIM6-TRIM34B2RNG4 842 aa18.3■□□□□ 0.52
RETREG3-208ENST00000589797 RPGRIP1LQ68CZ1 1315 aa18.29■□□□□ 0.52
RETREG3-208ENST00000589797 NCKAP5LQ9HCH0 1330 aa18.29■□□□□ 0.52
RETREG3-208ENST00000589797 KCNJ4P48050 445 aa18.29■□□□□ 0.52
RETREG3-208ENST00000589797 RALGAPBQ86X10 1494 aa18.29■□□□□ 0.52
RETREG3-208ENST00000589797 DDX19BQ9UMR2 479 aa18.29■□□□□ 0.52
RETREG3-208ENST00000589797 RTEL1-TNFRSF6BF6WH68 1400 aa18.28■□□□□ 0.52
RETREG3-208ENST00000589797 TMPOP42166 694 aaKnown RBP18.28■□□□□ 0.52
RETREG3-208ENST00000589797 CCDC9Q9Y3X0 531 aaKnown RBP18.28■□□□□ 0.52
RETREG3-208ENST00000589797 ESCO1Q5FWF5 840 aa18.28■□□□□ 0.52
RETREG3-208ENST00000589797 ZRANB1Q9UGI0 708 aa18.28■□□□□ 0.52
RETREG3-208ENST00000589797 TSPYL4Q9UJ04 414 aa18.28■□□□□ 0.52
RETREG3-208ENST00000589797 CCDC61Q9Y6R9 512 aa18.28■□□□□ 0.52
RETREG3-208ENST00000589797 SCAF11Q99590 1463 aaKnown RBP18.27■□□□□ 0.52
RETREG3-208ENST00000589797 SPINK5Q9NQ38 1064 aaPredicted RBP18.27■□□□□ 0.51
RETREG3-208ENST00000589797 FKBP5Q13451 457 aaPredicted RBP18.26■□□□□ 0.51
RETREG3-208ENST00000589797 PDZRN3Q9UPQ7 1066 aa18.26■□□□□ 0.51
RETREG3-208ENST00000589797 ITSN2Q9NZM3 1697 aa18.26■□□□□ 0.51
RETREG3-208ENST00000589797 TEFQ10587 303 aa18.25■□□□□ 0.51
RETREG3-208ENST00000589797 GNAI1P63096 354 aa18.25■□□□□ 0.51
RETREG3-208ENST00000589797 WDR7Q9Y4E6 1490 aa18.25■□□□□ 0.51
RETREG3-208ENST00000589797 FOXD4L5Q5VV16 416 aaPredicted RBP18.25■□□□□ 0.51
RETREG3-208ENST00000589797 FOXD4L4Q8WXT5 416 aaPredicted RBP18.25■□□□□ 0.51
RETREG3-208ENST00000589797 DENND4BO75064 1496 aaPredicted RBP18.25■□□□□ 0.51
RETREG3-208ENST00000589797 TWISTNBQ3B726 338 aaPredicted RBP18.24■□□□□ 0.51
RETREG3-208ENST00000589797 BACH2Q9BYV9 841 aa18.24■□□□□ 0.51
RETREG3-208ENST00000589797 A2MP01023 1474 aa18.24■□□□□ 0.51
RETREG3-208ENST00000589797 TNNQ9UQP3 1299 aa18.23■□□□□ 0.51
RETREG3-208ENST00000589797 CHMP3Q9Y3E7 222 aa18.23■□□□□ 0.51
RETREG3-208ENST00000589797 GOLGA6L22H0YM25 854 aa18.23■□□□□ 0.51
RETREG3-208ENST00000589797 NAP1L2Q9ULW6 460 aaPredicted RBP18.23■□□□□ 0.51
RETREG3-208ENST00000589797 MBD5Q9P267 1494 aa18.23■□□□□ 0.51
RETREG3-208ENST00000589797 RILPL2Q969X0 211 aa18.22■□□□□ 0.51
RETREG3-208ENST00000589797 MCM10Q7L590 875 aa18.22■□□□□ 0.51
RETREG3-208ENST00000589797 DUOX2Q9NRD8 1548 aa18.22■□□□□ 0.51
RETREG3-208ENST00000589797 SSH1Q8WYL5 1049 aa18.21■□□□□ 0.51
RETREG3-208ENST00000589797 FYB1O15117 783 aa18.21■□□□□ 0.51
RETREG3-208ENST00000589797 FAM83GA6ND36 823 aa18.21■□□□□ 0.5
RETREG3-208ENST00000589797 RARSP54136 660 aaKnown RBP18.21■□□□□ 0.5
RETREG3-208ENST00000589797 DMRT2Q9Y5R5 561 aa18.21■□□□□ 0.5
RETREG3-208ENST00000589797 PDE3AQ14432 1141 aa18.2■□□□□ 0.5
RETREG3-208ENST00000589797 FOXD4L6Q3SYB3 417 aaPredicted RBP18.2■□□□□ 0.5
RETREG3-208ENST00000589797 FOXD4L3Q6VB84 417 aaPredicted RBP18.2■□□□□ 0.5
RETREG3-208ENST00000589797 ABCC2Q92887 1545 aa18.2■□□□□ 0.5
RETREG3-208ENST00000589797 PARD3Q8TEW0 1356 aa18.19■□□□□ 0.5
RETREG3-208ENST00000589797 SPATA31E1Q6ZUB1 1445 aa18.19■□□□□ 0.5
RETREG3-208ENST00000589797 ERCC6L2Q5T890 1561 aa18.19■□□□□ 0.5
RETREG3-208ENST00000589797 THEMISQ8N1K5 641 aaPredicted RBP18.19■□□□□ 0.5
RETREG3-208ENST00000589797 ABCC10Q5T3U5 1492 aa18.18■□□□□ 0.5
RETREG3-208ENST00000589797 WDR63Q8IWG1 891 aa18.18■□□□□ 0.5
RETREG3-208ENST00000589797 USP35Q9P2H5 1018 aa18.18■□□□□ 0.5
RETREG3-208ENST00000589797 AIMP1Q12904 312 aaKnown RBP18.18■□□□□ 0.5
RETREG3-208ENST00000589797 ATF7IPQ6VMQ6 1270 aa18.18■□□□□ 0.5
RETREG3-208ENST00000589797 KIF16BQ96L93 1317 aa18.18■□□□□ 0.5
RETREG3-208ENST00000589797 HMMRO75330 724 aa18.18■□□□□ 0.5
RETREG3-208ENST00000589797 PLEKHH1Q9ULM0 1364 aa18.18■□□□□ 0.5
RETREG3-208ENST00000589797 FGD1P98174 961 aa18.17■□□□□ 0.5
RETREG3-208ENST00000589797 NLRP2Q9NX02 1062 aa18.17■□□□□ 0.5
RETREG3-208ENST00000589797 SLC4A2P04920 1241 aa18.17■□□□□ 0.5
RETREG3-208ENST00000589797 TMEM57Q8N5G2 664 aa18.17■□□□□ 0.5
RETREG3-208ENST00000589797 AMOTL2Q9Y2J4 779 aa18.17■□□□□ 0.5
RETREG3-208ENST00000589797 ADGRL2O95490 1459 aa18.17■□□□□ 0.5
RETREG3-208ENST00000589797 USHBP1Q8N6Y0 703 aa18.17■□□□□ 0.5
RETREG3-208ENST00000589797 ATAD2Q6PL18 1390 aa18.17■□□□□ 0.5
RETREG3-208ENST00000589797 WASLO00401 505 aaPredicted RBP18.17■□□□□ 0.5
RETREG3-208ENST00000589797 C1orf141Q5JVX7 400 aa18.17■□□□□ 0.5
RETREG3-208ENST00000589797 PLCB2Q00722 1185 aa18.16■□□□□ 0.5
RETREG3-208ENST00000589797 API5Q9BZZ5 524 aaKnown RBP18.16■□□□□ 0.5
RETREG3-208ENST00000589797 IGHDP01880 384 aa18.15■□□□□ 0.5
RETREG3-208ENST00000589797 PROSER2Q86WR7 435 aaPredicted RBP18.15■□□□□ 0.5
RETREG3-208ENST00000589797 SHANK2Q9UPX8 1470 aa18.14■□□□□ 0.49
RETREG3-208ENST00000589797 FCHSD2O94868 740 aa18.14■□□□□ 0.49
RETREG3-208ENST00000589797 MVPQ14764 893 aaKnown RBP18.13■□□□□ 0.49
RETREG3-208ENST00000589797 ZNF692Q9BU19 519 aaPredicted RBP18.13■□□□□ 0.49
RETREG3-208ENST00000589797 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.13■□□□□ 0.496e-6■■■■■ 38.2
RETREG3-208ENST00000589797 FOXO3O43524 673 aa18.13■□□□□ 0.49
RETREG3-208ENST00000589797 ZC3H6P61129 1189 aaKnown RBP18.13■□□□□ 0.49
RETREG3-208ENST00000589797 TRIM44Q96DX7 344 aaPredicted RBP18.12■□□□□ 0.49
RETREG3-208ENST00000589797 KIAA1211Q6ZU35 1233 aa18.11■□□□□ 0.49
RETREG3-208ENST00000589797 ZNF518AQ6AHZ1 1483 aa18.11■□□□□ 0.49
RETREG3-208ENST00000589797 HSP90AB2PQ58FF8 381 aa18.11■□□□□ 0.49
RETREG3-208ENST00000589797 NFE2L2Q16236 605 aa18.1■□□□□ 0.49
RETREG3-208ENST00000589797 C9orf78Q9NZ63 289 aaPredicted RBP18.1■□□□□ 0.49
RETREG3-208ENST00000589797 C22orf23Q9BZE7 217 aa18.1■□□□□ 0.49
RETREG3-208ENST00000589797 UHRF1BP1Q6BDS2 1440 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms