RNA–Protein interactions for RNA: ENST00000589538.5

DNMT1-221, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-221ENST00000589538 C1orf167Q5SNV9 1468 aa23.64■■□□□ 1.38
DNMT1-221ENST00000589538 POGKQ9P215 609 aa23.64■■□□□ 1.37
DNMT1-221ENST00000589538 PLEKHH1Q9ULM0 1364 aa23.64■■□□□ 1.37
DNMT1-221ENST00000589538 PRAM1Q96QH2 718 aa23.63■■□□□ 1.37
DNMT1-221ENST00000589538 PCGF6Q9BYE7 350 aa23.62■■□□□ 1.37
DNMT1-221ENST00000589538 TRAK1Q9UPV9 953 aa23.62■■□□□ 1.37
DNMT1-221ENST00000589538 COL16A1Q07092 1604 aaPredicted RBP23.59■■□□□ 1.37
DNMT1-221ENST00000589538 NHSL1Q5SYE7 1610 aa23.59■■□□□ 1.37
DNMT1-221ENST00000589538 TONSLQ96HA7 1378 aa23.57■■□□□ 1.36
DNMT1-221ENST00000589538 ARHGEF28Q8N1W1 1705 aaKnown RBP23.56■■□□□ 1.36
DNMT1-221ENST00000589538 FMN2Q9NZ56 1722 aa23.56■■□□□ 1.36
DNMT1-221ENST00000589538 ADGRB2O60241 1585 aa23.56■■□□□ 1.36
DNMT1-221ENST00000589538 JCADQ9P266 1359 aa23.55■■□□□ 1.36
DNMT1-221ENST00000589538 SAFB2Q14151 953 aaKnown RBP eCLIP23.55■■□□□ 1.36
DNMT1-221ENST00000589538 MED1Q15648 1581 aaPredicted RBP23.55■■□□□ 1.36
DNMT1-221ENST00000589538 DISP3Q9P2K9 1392 aa23.53■■□□□ 1.36
DNMT1-221ENST00000589538 TRPM1Q7Z4N2 1603 aa23.53■■□□□ 1.36
DNMT1-221ENST00000589538 NBPF1Q3BBV0 1214 aa23.53■■□□□ 1.36
DNMT1-221ENST00000589538 CLSPNQ9HAW4 1339 aa23.53■■□□□ 1.36
DNMT1-221ENST00000589538 EIF3AQ14152 1382 aaKnown RBP23.52■■□□□ 1.36
DNMT1-221ENST00000589538 ESCO1Q5FWF5 840 aa23.52■■□□□ 1.36
DNMT1-221ENST00000589538 ORAI2Q96SN7 254 aa23.52■■□□□ 1.36
DNMT1-221ENST00000589538 KIF1AQ12756 1690 aa23.49■■□□□ 1.35
DNMT1-221ENST00000589538 SHPRHQ149N8 1683 aa23.49■■□□□ 1.35
DNMT1-221ENST00000589538 LRRC59Q96AG4 307 aaKnown RBP23.49■■□□□ 1.35
DNMT1-221ENST00000589538 NPHP3Q7Z494 1330 aa23.49■■□□□ 1.35
DNMT1-221ENST00000589538 MINK1Q8N4C8 1332 aaPredicted RBP23.48■■□□□ 1.35
DNMT1-221ENST00000589538 ANKARQ7Z5J8 1434 aa23.48■■□□□ 1.35
DNMT1-221ENST00000589538 NUTM2FA1L443 756 aa23.47■■□□□ 1.35
DNMT1-221ENST00000589538 SPATA31A6Q5VVP1 1343 aa23.47■■□□□ 1.35
DNMT1-221ENST00000589538 ROCK2O75116 1388 aaKnown RBP23.47■■□□□ 1.35
DNMT1-221ENST00000589538 SOS2Q07890 1332 aaPredicted RBP23.45■■□□□ 1.34
DNMT1-221ENST00000589538 WASLO00401 505 aaPredicted RBP23.45■■□□□ 1.34
DNMT1-221ENST00000589538 HIRIP3Q9BW71 556 aaPredicted RBP23.45■■□□□ 1.34
DNMT1-221ENST00000589538 RGPD8O14715 1765 aaPredicted RBP23.43■■□□□ 1.34
DNMT1-221ENST00000589538 CENPJQ9HC77 1338 aaPredicted RBP23.43■■□□□ 1.34
DNMT1-221ENST00000589538 DDX17Q92841 729 aaKnown RBP23.43■■□□□ 1.34
DNMT1-221ENST00000589538 TULP4Q9NRJ4 1543 aa23.43■■□□□ 1.34
DNMT1-221ENST00000589538 GPRASP1Q5JY77 1395 aa23.42■■□□□ 1.34
DNMT1-221ENST00000589538 NBPF8Q3BBV2 869 aa23.42■■□□□ 1.34
DNMT1-221ENST00000589538 PHF23Q9BUL5 403 aaPredicted RBP23.42■■□□□ 1.34
DNMT1-221ENST00000589538 PHF8Q9UPP1 1060 aa23.42■■□□□ 1.34
DNMT1-221ENST00000589538 FOXO3O43524 673 aa23.41■■□□□ 1.34
DNMT1-221ENST00000589538 TIMELESSQ9UNS1 1208 aa23.41■■□□□ 1.34
DNMT1-221ENST00000589538 USP32Q8NFA0 1604 aa23.4■■□□□ 1.34
DNMT1-221ENST00000589538 RALGAPBQ86X10 1494 aa23.39■■□□□ 1.34
DNMT1-221ENST00000589538 PXDNQ92626 1479 aa23.39■■□□□ 1.34
DNMT1-221ENST00000589538 QRICH2Q9H0J4 1663 aa23.38■■□□□ 1.33
DNMT1-221ENST00000589538 ITSN1Q15811 1721 aa23.37■■□□□ 1.33
DNMT1-221ENST00000589538 PNPLA6Q8IY17 1366 aa23.37■■□□□ 1.33
DNMT1-221ENST00000589538 PSME1Q06323 249 aa23.36■■□□□ 1.33
DNMT1-221ENST00000589538 CCER1Q8TC90 406 aaPredicted RBP23.36■■□□□ 1.33
DNMT1-221ENST00000589538 CDK19Q9BWU1 502 aa23.36■■□□□ 1.33
DNMT1-221ENST00000589538 CARD11Q9BXL7 1154 aa23.35■■□□□ 1.33
DNMT1-221ENST00000589538 PRR36Q9H6K5 1346 aa23.33■■□□□ 1.33
DNMT1-221ENST00000589538 ATP7BP35670 1465 aa23.33■■□□□ 1.33
DNMT1-221ENST00000589538 KRT28Q7Z3Y7 464 aa23.33■■□□□ 1.33
DNMT1-221ENST00000589538 NUDT16Q96DE0 195 aaKnown RBP23.33■■□□□ 1.33
DNMT1-221ENST00000589538 MEX3CQ5U5Q3 659 aaKnown RBP23.32■■□□□ 1.32
DNMT1-221ENST00000589538 COL22A1Q8NFW1 1626 aaPredicted RBP23.32■■□□□ 1.32
DNMT1-221ENST00000589538 LRP6O75581 1613 aa23.31■■□□□ 1.32
DNMT1-221ENST00000589538 XPCQ01831 940 aaPredicted RBP23.31■■□□□ 1.32
DNMT1-221ENST00000589538 SBNO1A3KN83 1393 aa23.3■■□□□ 1.32
DNMT1-221ENST00000589538 NUTM2BA6NNL0 878 aaPredicted RBP23.3■■□□□ 1.32
DNMT1-221ENST00000589538 NUTM2EB1AL46 878 aaPredicted RBP23.3■■□□□ 1.32
DNMT1-221ENST00000589538 NUTM2AQ8IVF1 878 aaPredicted RBP23.3■■□□□ 1.32
DNMT1-221ENST00000589538 PMFBP1Q8TBY8 1022 aa23.3■■□□□ 1.32
DNMT1-221ENST00000589538 EVC2Q86UK5 1308 aa23.3■■□□□ 1.32
DNMT1-221ENST00000589538 SRPK2P78362 688 aaKnown RBP23.29■■□□□ 1.32
DNMT1-221ENST00000589538 CCDC61Q9Y6R9 512 aa23.29■■□□□ 1.32
DNMT1-221ENST00000589538 SPATA31A3Q5VYP0 1347 aa23.29■■□□□ 1.32
DNMT1-221ENST00000589538 NGDNQ8NEJ9 315 aaKnown RBP23.28■■□□□ 1.32
DNMT1-221ENST00000589538 TOPAZ1Q8N9V7 1692 aa23.28■■□□□ 1.32
DNMT1-221ENST00000589538 SBNO2Q9Y2G9 1366 aa23.27■■□□□ 1.32
DNMT1-221ENST00000589538 TNS3Q68CZ2 1445 aa23.27■■□□□ 1.32
DNMT1-221ENST00000589538 ARHGEF10O15013 1369 aa23.26■■□□□ 1.31
DNMT1-221ENST00000589538 PLEKHG3A1L390 1219 aa23.24■■□□□ 1.31
DNMT1-221ENST00000589538 SLC24A1O60721 1099 aa23.22■■□□□ 1.31
DNMT1-221ENST00000589538 CABP2Q9NPB3 220 aa23.22■■□□□ 1.31
DNMT1-221ENST00000589538 RGS17Q9UGC6 210 aaPredicted RBP23.22■■□□□ 1.31
DNMT1-221ENST00000589538 POLR3AO14802 1390 aaPredicted RBP23.22■■□□□ 1.31
DNMT1-221ENST00000589538 TRPM3Q9HCF6 1732 aaPredicted RBP23.22■■□□□ 1.31
DNMT1-221ENST00000589538 ZNF772Q68DY9 489 aaPredicted RBP23.21■■□□□ 1.31
DNMT1-221ENST00000589538 PPIP5K1Q6PFW1 1433 aa23.2■■□□□ 1.3
DNMT1-221ENST00000589538 ILDR2Q71H61 639 aa23.2■■□□□ 1.3
DNMT1-221ENST00000589538 ACEP12821 1306 aa23.19■■□□□ 1.3
DNMT1-221ENST00000589538 ATAD2Q6PL18 1390 aa23.18■■□□□ 1.3
DNMT1-221ENST00000589538 LMOD2Q6P5Q4 547 aa23.18■■□□□ 1.3
DNMT1-221ENST00000589538 ALS2Q96Q42 1657 aa23.17■■□□□ 1.3
DNMT1-221ENST00000589538 ADAMTS2O95450 1211 aa23.17■■□□□ 1.3
DNMT1-221ENST00000589538 C8orf37Q96NL8 207 aa23.17■■□□□ 1.3
DNMT1-221ENST00000589538 MARF1Q9Y4F3 1742 aaKnown RBP23.16■■□□□ 1.3
DNMT1-221ENST00000589538 BRD4O60885 1362 aaPredicted RBP23.16■■□□□ 1.3
DNMT1-221ENST00000589538 AFF2P51816 1311 aa23.15■■□□□ 1.3
DNMT1-221ENST00000589538 PAK3O75914 559 aaPredicted RBP23.15■■□□□ 1.3
DNMT1-221ENST00000589538 HAP1P54257 671 aaPredicted RBP23.15■■□□□ 1.3
DNMT1-221ENST00000589538 NGLY1Q96IV0 654 aa23.14■■□□□ 1.29
DNMT1-221ENST00000589538 ST20-MTHFSA0A0A6YYL1 179 aa23.13■■□□□ 1.29
DNMT1-221ENST00000589538 POTEAQ6S8J7 498 aa23.13■■□□□ 1.29
DNMT1-221ENST00000589538 PUS7Q96PZ0 661 aaKnown RBP23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms