RNA–Protein interactions for RNA: ENST00000589216.1

PTPN2-208, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 3

Gene PTPN2, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-208ENST00000589216 C14orf93Q9H972 538 aaKnown RBP14.44□□□□□ -0.1
PTPN2-208ENST00000589216 DLC1Q96QB1 1528 aa14.44□□□□□ -0.1
PTPN2-208ENST00000589216 DISP3Q9P2K9 1392 aa14.44□□□□□ -0.1
PTPN2-208ENST00000589216 C1orf167Q5SNV9 1468 aa14.44□□□□□ -0.1
PTPN2-208ENST00000589216 KDM2AQ9Y2K7 1162 aa14.43□□□□□ -0.1
PTPN2-208ENST00000589216 SHPRHQ149N8 1683 aa14.42□□□□□ -0.1
PTPN2-208ENST00000589216 BRINP3Q76B58 766 aa14.42□□□□□ -0.1
PTPN2-208ENST00000589216 WAPLQ7Z5K2 1190 aa14.42□□□□□ -0.1
PTPN2-208ENST00000589216 ADGRB2O60241 1585 aa14.42□□□□□ -0.1
PTPN2-208ENST00000589216 RGPD8O14715 1765 aaPredicted RBP14.41□□□□□ -0.1
PTPN2-208ENST00000589216 SIN3AQ96ST3 1273 aa14.4□□□□□ -0.1
PTPN2-208ENST00000589216 USP32Q8NFA0 1604 aa14.4□□□□□ -0.1
PTPN2-208ENST00000589216 TRPM1Q7Z4N2 1603 aa14.39□□□□□ -0.11
PTPN2-208ENST00000589216 DDX17Q92841 729 aaKnown RBP14.38□□□□□ -0.11
PTPN2-208ENST00000589216 LRP6O75581 1613 aa14.37□□□□□ -0.11
PTPN2-208ENST00000589216 KIF1AQ12756 1690 aa14.36□□□□□ -0.11
PTPN2-208ENST00000589216 SAFB2Q14151 953 aaKnown RBP eCLIP14.35□□□□□ -0.11
PTPN2-208ENST00000589216 PRAM1Q96QH2 718 aa14.35□□□□□ -0.11
PTPN2-208ENST00000589216 ORAI2Q96SN7 254 aa14.35□□□□□ -0.11
PTPN2-208ENST00000589216 JCADQ9P266 1359 aa14.34□□□□□ -0.11
PTPN2-208ENST00000589216 PXDNQ92626 1479 aa14.33□□□□□ -0.12
PTPN2-208ENST00000589216 NUTM2FA1L443 756 aa14.33□□□□□ -0.12
PTPN2-208ENST00000589216 ILDR2Q71H61 639 aa14.33□□□□□ -0.12
PTPN2-208ENST00000589216 L3MBTL2Q969R5 705 aa14.33□□□□□ -0.12
PTPN2-208ENST00000589216 TRAK1Q9UPV9 953 aa14.33□□□□□ -0.12
PTPN2-208ENST00000589216 QRICH2Q9H0J4 1663 aa14.33□□□□□ -0.12
PTPN2-208ENST00000589216 NEUROD1Q13562 356 aa14.32□□□□□ -0.12
PTPN2-208ENST00000589216 STAC3Q96MF2 364 aa14.32□□□□□ -0.12
PTPN2-208ENST00000589216 TOPAZ1Q8N9V7 1692 aa14.31□□□□□ -0.12
PTPN2-208ENST00000589216 NBPF1Q3BBV0 1214 aa14.31□□□□□ -0.12
PTPN2-208ENST00000589216 SIRT1Q96EB6 747 aa14.31□□□□□ -0.12
PTPN2-208ENST00000589216 TULP4Q9NRJ4 1543 aa14.31□□□□□ -0.12
PTPN2-208ENST00000589216 COL22A1Q8NFW1 1626 aaPredicted RBP14.3□□□□□ -0.12
PTPN2-208ENST00000589216 PNPLA6Q8IY17 1366 aa14.3□□□□□ -0.12
PTPN2-208ENST00000589216 HIRIP3Q9BW71 556 aaPredicted RBP14.29□□□□□ -0.12
PTPN2-208ENST00000589216 MINK1Q8N4C8 1332 aaPredicted RBP14.29□□□□□ -0.12
PTPN2-208ENST00000589216 ATP7BP35670 1465 aa14.28□□□□□ -0.12
PTPN2-208ENST00000589216 ITSN1Q15811 1721 aa14.28□□□□□ -0.12
PTPN2-208ENST00000589216 POGKQ9P215 609 aa14.28□□□□□ -0.12
PTPN2-208ENST00000589216 ABCA3Q99758 1704 aa14.27□□□□□ -0.12
PTPN2-208ENST00000589216 ANKARQ7Z5J8 1434 aa14.27□□□□□ -0.12
PTPN2-208ENST00000589216 SOS2Q07890 1332 aaPredicted RBP14.27□□□□□ -0.12
PTPN2-208ENST00000589216 ESCO1Q5FWF5 840 aa14.27□□□□□ -0.13
PTPN2-208ENST00000589216 TRPM3Q9HCF6 1732 aaPredicted RBP14.27□□□□□ -0.13
PTPN2-208ENST00000589216 PRR36Q9H6K5 1346 aa14.26□□□□□ -0.13
PTPN2-208ENST00000589216 XPCQ01831 940 aaPredicted RBP14.26□□□□□ -0.13
PTPN2-208ENST00000589216 RGS17Q9UGC6 210 aaPredicted RBP14.26□□□□□ -0.13
PTPN2-208ENST00000589216 NBPF8Q3BBV2 869 aa14.25□□□□□ -0.13
PTPN2-208ENST00000589216 MARF1Q9Y4F3 1742 aaKnown RBP14.24□□□□□ -0.13
PTPN2-208ENST00000589216 SPATA31A6Q5VVP1 1343 aa14.24□□□□□ -0.13
PTPN2-208ENST00000589216 PCGF6Q9BYE7 350 aa14.24□□□□□ -0.13
PTPN2-208ENST00000589216 RALGAPBQ86X10 1494 aa14.24□□□□□ -0.13
PTPN2-208ENST00000589216 TONSLQ96HA7 1378 aa14.23□□□□□ -0.13
PTPN2-208ENST00000589216 NPHP3Q7Z494 1330 aa14.23□□□□□ -0.13
PTPN2-208ENST00000589216 FOXO3O43524 673 aa14.23□□□□□ -0.13
PTPN2-208ENST00000589216 ADRA2BP18089 450 aa14.22□□□□□ -0.13
PTPN2-208ENST00000589216 ALS2Q96Q42 1657 aa14.22□□□□□ -0.13
PTPN2-208ENST00000589216 ROCK2O75116 1388 aaKnown RBP14.22□□□□□ -0.13
PTPN2-208ENST00000589216 GPRASP1Q5JY77 1395 aa14.22□□□□□ -0.13
PTPN2-208ENST00000589216 CRYBG1Q9Y4K1 1723 aa14.21□□□□□ -0.13
PTPN2-208ENST00000589216 WASLO00401 505 aaPredicted RBP14.21□□□□□ -0.13
PTPN2-208ENST00000589216 LRRC59Q96AG4 307 aaKnown RBP14.21□□□□□ -0.13
PTPN2-208ENST00000589216 NUTM2BA6NNL0 878 aaPredicted RBP14.2□□□□□ -0.14
PTPN2-208ENST00000589216 NUTM2EB1AL46 878 aaPredicted RBP14.2□□□□□ -0.14
PTPN2-208ENST00000589216 NUTM2AQ8IVF1 878 aaPredicted RBP14.2□□□□□ -0.14
PTPN2-208ENST00000589216 PHF8Q9UPP1 1060 aa14.2□□□□□ -0.14
PTPN2-208ENST00000589216 TNS3Q68CZ2 1445 aa14.2□□□□□ -0.14
PTPN2-208ENST00000589216 EIF3AQ14152 1382 aaKnown RBP14.2□□□□□ -0.14
PTPN2-208ENST00000589216 CENPJQ9HC77 1338 aaPredicted RBP14.18□□□□□ -0.14
PTPN2-208ENST00000589216 POTEAQ6S8J7 498 aa14.18□□□□□ -0.14
PTPN2-208ENST00000589216 PMFBP1Q8TBY8 1022 aa14.18□□□□□ -0.14
PTPN2-208ENST00000589216 SPATA31A3Q5VYP0 1347 aa14.16□□□□□ -0.14
PTPN2-208ENST00000589216 MEX3CQ5U5Q3 659 aaKnown RBP14.16□□□□□ -0.14
PTPN2-208ENST00000589216 PLCH1Q4KWH8 1693 aa14.15□□□□□ -0.14
PTPN2-208ENST00000589216 KRT28Q7Z3Y7 464 aa14.15□□□□□ -0.14
PTPN2-208ENST00000589216 CDK19Q9BWU1 502 aa14.15□□□□□ -0.14
PTPN2-208ENST00000589216 PHRF1Q9P1Y6 1649 aaKnown RBP14.15□□□□□ -0.14
PTPN2-208ENST00000589216 SBNO1A3KN83 1393 aa14.14□□□□□ -0.15
PTPN2-208ENST00000589216 ADAMTS2O95450 1211 aa14.13□□□□□ -0.15
PTPN2-208ENST00000589216 NUDT16Q96DE0 195 aaKnown RBP14.13□□□□□ -0.15
PTPN2-208ENST00000589216 AFF2P51816 1311 aa14.13□□□□□ -0.15
PTPN2-208ENST00000589216 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.12□□□□□ -0.15
PTPN2-208ENST00000589216 AKAP12Q02952 1782 aa14.12□□□□□ -0.15
PTPN2-208ENST00000589216 C8orf37Q96NL8 207 aa14.12□□□□□ -0.15
PTPN2-208ENST00000589216 PPIP5K1Q6PFW1 1433 aa14.12□□□□□ -0.15
PTPN2-208ENST00000589216 NRKQ7Z2Y5 1582 aa14.12□□□□□ -0.15
PTPN2-208ENST00000589216 POLR3AO14802 1390 aaPredicted RBP14.11□□□□□ -0.15
PTPN2-208ENST00000589216 CABP2Q9NPB3 220 aa14.11□□□□□ -0.15
PTPN2-208ENST00000589216 SBNO2Q9Y2G9 1366 aa14.1□□□□□ -0.15
PTPN2-208ENST00000589216 SOCS7O14512 581 aa14.1□□□□□ -0.15
PTPN2-208ENST00000589216 PLEKHG5O94827 1062 aa14.1□□□□□ -0.15
PTPN2-208ENST00000589216 CARD11Q9BXL7 1154 aa14.1□□□□□ -0.15
PTPN2-208ENST00000589216 NRAPQ86VF7 1730 aa14.1□□□□□ -0.15
PTPN2-208ENST00000589216 ARHGEF10O15013 1369 aa14.09□□□□□ -0.15
PTPN2-208ENST00000589216 SRPK2P78362 688 aaKnown RBP14.09□□□□□ -0.15
PTPN2-208ENST00000589216 PSME1Q06323 249 aa14.09□□□□□ -0.15
PTPN2-208ENST00000589216 CABLES1Q8TDN4 633 aa14.09□□□□□ -0.15
PTPN2-208ENST00000589216 PIK3C2AO00443 1686 aa14.09□□□□□ -0.15
PTPN2-208ENST00000589216 MON2Q7Z3U7 1717 aa14.09□□□□□ -0.15
PTPN2-208ENST00000589216 NGDNQ8NEJ9 315 aaKnown RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms