RNA–Protein interactions for RNA: ENST00000589201.1

LINC00654-202, long intergenic non-protein coding RNA 654, humanhuman

TSL 3 BASIC

Gene LINC00654, Length 579 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-202ENST00000589201 C1orf167Q5SNV9 1468 aa28.72■■■□□ 2.19
LINC00654-202ENST00000589201 SAFB2Q14151 953 aaKnown RBP eCLIP28.7■■■□□ 2.18
LINC00654-202ENST00000589201 ORAI2Q96SN7 254 aa28.68■■■□□ 2.18
LINC00654-202ENST00000589201 POGKQ9P215 609 aa28.68■■■□□ 2.18
LINC00654-202ENST00000589201 AHDC1Q5TGY3 1603 aaPredicted RBP28.68■■■□□ 2.18
LINC00654-202ENST00000589201 DLC1Q96QB1 1528 aa28.68■■■□□ 2.18
LINC00654-202ENST00000589201 CDC42BPGQ6DT37 1551 aa28.67■■■□□ 2.18
LINC00654-202ENST00000589201 COL16A1Q07092 1604 aaPredicted RBP28.66■■■□□ 2.18
LINC00654-202ENST00000589201 DDX17Q92841 729 aaKnown RBP28.66■■■□□ 2.18
LINC00654-202ENST00000589201 MED1Q15648 1581 aaPredicted RBP28.66■■■□□ 2.18
LINC00654-202ENST00000589201 NUTM2FA1L443 756 aa28.65■■■□□ 2.18
LINC00654-202ENST00000589201 NBPF1Q3BBV0 1214 aa28.65■■■□□ 2.18
LINC00654-202ENST00000589201 PCGF6Q9BYE7 350 aa28.65■■■□□ 2.18
LINC00654-202ENST00000589201 KIAA1210Q9ULL0 1709 aa28.63■■■□□ 2.17
LINC00654-202ENST00000589201 JCADQ9P266 1359 aa28.62■■■□□ 2.17
LINC00654-202ENST00000589201 ESCO1Q5FWF5 840 aa28.61■■■□□ 2.17
LINC00654-202ENST00000589201 NHSL1Q5SYE7 1610 aa28.6■■■□□ 2.17
LINC00654-202ENST00000589201 FMN2Q9NZ56 1722 aa28.57■■■□□ 2.16
LINC00654-202ENST00000589201 MINK1Q8N4C8 1332 aaPredicted RBP28.56■■■□□ 2.16
LINC00654-202ENST00000589201 HIRIP3Q9BW71 556 aaPredicted RBP28.56■■■□□ 2.16
LINC00654-202ENST00000589201 LRRC59Q96AG4 307 aaKnown RBP28.54■■■□□ 2.16
LINC00654-202ENST00000589201 ARHGEF28Q8N1W1 1705 aaKnown RBP28.53■■■□□ 2.16
LINC00654-202ENST00000589201 SOS2Q07890 1332 aaPredicted RBP28.51■■■□□ 2.15
LINC00654-202ENST00000589201 FOXO3O43524 673 aa28.51■■■□□ 2.15
LINC00654-202ENST00000589201 PHF23Q9BUL5 403 aaPredicted RBP28.51■■■□□ 2.15
LINC00654-202ENST00000589201 TONSLQ96HA7 1378 aa28.5■■■□□ 2.15
LINC00654-202ENST00000589201 NBPF8Q3BBV2 869 aa28.5■■■□□ 2.15
LINC00654-202ENST00000589201 ADGRB2O60241 1585 aa28.5■■■□□ 2.15
LINC00654-202ENST00000589201 ILDR2Q71H61 639 aa28.49■■■□□ 2.15
LINC00654-202ENST00000589201 RGPD8O14715 1765 aaPredicted RBP28.49■■■□□ 2.15
LINC00654-202ENST00000589201 SHPRHQ149N8 1683 aa28.48■■■□□ 2.15
LINC00654-202ENST00000589201 SPATA31A6Q5VVP1 1343 aa28.48■■■□□ 2.15
LINC00654-202ENST00000589201 NPHP3Q7Z494 1330 aa28.47■■■□□ 2.15
LINC00654-202ENST00000589201 WASLO00401 505 aaPredicted RBP28.47■■■□□ 2.15
LINC00654-202ENST00000589201 TRPM1Q7Z4N2 1603 aa28.47■■■□□ 2.15
LINC00654-202ENST00000589201 XPCQ01831 940 aaPredicted RBP28.45■■■□□ 2.14
LINC00654-202ENST00000589201 PHF8Q9UPP1 1060 aa28.45■■■□□ 2.14
LINC00654-202ENST00000589201 USP32Q8NFA0 1604 aa28.43■■■□□ 2.14
LINC00654-202ENST00000589201 ANKARQ7Z5J8 1434 aa28.43■■■□□ 2.14
LINC00654-202ENST00000589201 ROCK2O75116 1388 aaKnown RBP28.42■■■□□ 2.14
LINC00654-202ENST00000589201 PNPLA6Q8IY17 1366 aa28.42■■■□□ 2.14
LINC00654-202ENST00000589201 NUTM2BA6NNL0 878 aaPredicted RBP28.42■■■□□ 2.14
LINC00654-202ENST00000589201 NUTM2EB1AL46 878 aaPredicted RBP28.42■■■□□ 2.14
LINC00654-202ENST00000589201 NUTM2AQ8IVF1 878 aaPredicted RBP28.42■■■□□ 2.14
LINC00654-202ENST00000589201 RGS17Q9UGC6 210 aaPredicted RBP28.42■■■□□ 2.14
LINC00654-202ENST00000589201 LRP6O75581 1613 aa28.42■■■□□ 2.14
LINC00654-202ENST00000589201 PRR36Q9H6K5 1346 aa28.42■■■□□ 2.14
LINC00654-202ENST00000589201 PXDNQ92626 1479 aa28.4■■■□□ 2.14
LINC00654-202ENST00000589201 KIF1AQ12756 1690 aa28.4■■■□□ 2.14
LINC00654-202ENST00000589201 CENPJQ9HC77 1338 aaPredicted RBP28.4■■■□□ 2.14
LINC00654-202ENST00000589201 PMFBP1Q8TBY8 1022 aa28.39■■■□□ 2.14
LINC00654-202ENST00000589201 CDK19Q9BWU1 502 aa28.39■■■□□ 2.14
LINC00654-202ENST00000589201 EIF3AQ14152 1382 aaKnown RBP28.38■■■□□ 2.13
LINC00654-202ENST00000589201 KRT28Q7Z3Y7 464 aa28.38■■■□□ 2.13
LINC00654-202ENST00000589201 TULP4Q9NRJ4 1543 aa28.38■■■□□ 2.13
LINC00654-202ENST00000589201 MEX3CQ5U5Q3 659 aaKnown RBP28.37■■■□□ 2.13
LINC00654-202ENST00000589201 NUDT16Q96DE0 195 aaKnown RBP28.35■■■□□ 2.13
LINC00654-202ENST00000589201 PSME1Q06323 249 aa28.34■■■□□ 2.13
LINC00654-202ENST00000589201 GPRASP1Q5JY77 1395 aa28.34■■■□□ 2.13
LINC00654-202ENST00000589201 CARD11Q9BXL7 1154 aa28.31■■■□□ 2.12
LINC00654-202ENST00000589201 SPATA31A3Q5VYP0 1347 aa28.31■■■□□ 2.12
LINC00654-202ENST00000589201 CLSPNQ9HAW4 1339 aa28.31■■■□□ 2.12
LINC00654-202ENST00000589201 QRICH2Q9H0J4 1663 aa28.3■■■□□ 2.12
LINC00654-202ENST00000589201 ATP7BP35670 1465 aa28.29■■■□□ 2.12
LINC00654-202ENST00000589201 RALGAPBQ86X10 1494 aa28.28■■■□□ 2.12
LINC00654-202ENST00000589201 POTEAQ6S8J7 498 aa28.28■■■□□ 2.12
LINC00654-202ENST00000589201 ADAMTS2O95450 1211 aa28.27■■■□□ 2.12
LINC00654-202ENST00000589201 SRPK2P78362 688 aaKnown RBP28.27■■■□□ 2.12
LINC00654-202ENST00000589201 NGDNQ8NEJ9 315 aaKnown RBP28.27■■■□□ 2.12
LINC00654-202ENST00000589201 COL22A1Q8NFW1 1626 aaPredicted RBP28.26■■■□□ 2.11
LINC00654-202ENST00000589201 CABP2Q9NPB3 220 aa28.26■■■□□ 2.11
LINC00654-202ENST00000589201 CCDC61Q9Y6R9 512 aa28.26■■■□□ 2.11
LINC00654-202ENST00000589201 CCER1Q8TC90 406 aaPredicted RBP28.25■■■□□ 2.11
LINC00654-202ENST00000589201 SBNO1A3KN83 1393 aa28.24■■■□□ 2.11
LINC00654-202ENST00000589201 C8orf37Q96NL8 207 aa28.24■■■□□ 2.11
LINC00654-202ENST00000589201 ITSN1Q15811 1721 aa28.23■■■□□ 2.11
LINC00654-202ENST00000589201 TNS3Q68CZ2 1445 aa28.22■■■□□ 2.11
LINC00654-202ENST00000589201 LMOD2Q6P5Q4 547 aa28.22■■■□□ 2.11
LINC00654-202ENST00000589201 TIMELESSQ9UNS1 1208 aa28.21■■■□□ 2.11
LINC00654-202ENST00000589201 EVC2Q86UK5 1308 aa28.2■■■□□ 2.11
LINC00654-202ENST00000589201 PLEKHG3A1L390 1219 aa28.2■■■□□ 2.1
LINC00654-202ENST00000589201 AFF2P51816 1311 aa28.19■■■□□ 2.1
LINC00654-202ENST00000589201 ZNF772Q68DY9 489 aaPredicted RBP28.19■■■□□ 2.1
LINC00654-202ENST00000589201 NGLY1Q96IV0 654 aa28.18■■■□□ 2.1
LINC00654-202ENST00000589201 TOPAZ1Q8N9V7 1692 aa28.18■■■□□ 2.1
LINC00654-202ENST00000589201 ACEP12821 1306 aa28.18■■■□□ 2.1
LINC00654-202ENST00000589201 PLEKHG5O94827 1062 aa28.17■■■□□ 2.1
LINC00654-202ENST00000589201 TRPM3Q9HCF6 1732 aaPredicted RBP28.17■■■□□ 2.1
LINC00654-202ENST00000589201 CABLES1Q8TDN4 633 aa28.16■■■□□ 2.1
LINC00654-202ENST00000589201 POLR3AO14802 1390 aaPredicted RBP28.15■■■□□ 2.1
LINC00654-202ENST00000589201 ARHGEF10O15013 1369 aa28.15■■■□□ 2.1
LINC00654-202ENST00000589201 PAK3O75914 559 aaPredicted RBP28.15■■■□□ 2.1
LINC00654-202ENST00000589201 PPIP5K1Q6PFW1 1433 aa28.15■■■□□ 2.1
LINC00654-202ENST00000589201 SOCS7O14512 581 aa28.14■■■□□ 2.1
LINC00654-202ENST00000589201 CABP1Q9NZU7 370 aa28.13■■■□□ 2.09
LINC00654-202ENST00000589201 SBNO2Q9Y2G9 1366 aa28.11■■■□□ 2.09
LINC00654-202ENST00000589201 HAP1P54257 671 aaPredicted RBP28.1■■■□□ 2.09
LINC00654-202ENST00000589201 ALS2Q96Q42 1657 aa28.1■■■□□ 2.09
LINC00654-202ENST00000589201 FNBP4Q8N3X1 1017 aaPredicted RBP28.09■■■□□ 2.09
LINC00654-202ENST00000589201 ST20-MTHFSA0A0A6YYL1 179 aa28.08■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms