RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 NBPF1Q3BBV0 1214 aa20.17■□□□□ 0.82
CCDC43-203ENST00000588210 FAM135BQ49AJ0 1406 aa20.17■□□□□ 0.82
CCDC43-203ENST00000588210 NBPF8Q3BBV2 869 aa20.17■□□□□ 0.82
CCDC43-203ENST00000588210 TSHZ2Q9NRE2 1034 aa20.16■□□□□ 0.82
CCDC43-203ENST00000588210 DLC1Q96QB1 1528 aa20.16■□□□□ 0.82
CCDC43-203ENST00000588210 TRPM1Q7Z4N2 1603 aa20.16■□□□□ 0.82
CCDC43-203ENST00000588210 TRAK1Q9UPV9 953 aa20.15■□□□□ 0.82
CCDC43-203ENST00000588210 ADGRL3Q9HAR2 1447 aa20.14■□□□□ 0.82
CCDC43-203ENST00000588210 WAPLQ7Z5K2 1190 aa20.14■□□□□ 0.81
CCDC43-203ENST00000588210 HSPA5P11021 654 aaKnown RBP20.13■□□□□ 0.81
CCDC43-203ENST00000588210 FKBP8Q14318 412 aa20.13■□□□□ 0.81
CCDC43-203ENST00000588210 DCCP43146 1447 aa20.13■□□□□ 0.81
CCDC43-203ENST00000588210 WASHC2AQ641Q2 1341 aa20.13■□□□□ 0.81
CCDC43-203ENST00000588210 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.12■□□□□ 0.81
CCDC43-203ENST00000588210 CADPS2Q86UW7 1296 aa20.12■□□□□ 0.81
CCDC43-203ENST00000588210 ROCK2O75116 1388 aaKnown RBP20.12■□□□□ 0.81
CCDC43-203ENST00000588210 ATF3P18847 181 aa20.12■□□□□ 0.81
CCDC43-203ENST00000588210 PRAM1Q96QH2 718 aa20.12■□□□□ 0.81
CCDC43-203ENST00000588210 PLEKHH1Q9ULM0 1364 aa20.11■□□□□ 0.81
CCDC43-203ENST00000588210 NALCNQ8IZF0 1738 aa20.11■□□□□ 0.81
CCDC43-203ENST00000588210 POGKQ9P215 609 aa20.11■□□□□ 0.81
CCDC43-203ENST00000588210 NEFLP07196 543 aa20.1■□□□□ 0.81
CCDC43-203ENST00000588210 EIF4G2P78344 907 aaKnown RBP eCLIP20.1■□□□□ 0.81
CCDC43-203ENST00000588210 RALGAPBQ86X10 1494 aa20.09■□□□□ 0.81
CCDC43-203ENST00000588210 GPRASP1Q5JY77 1395 aa20.08■□□□□ 0.81
CCDC43-203ENST00000588210 PIP4K2BP78356 416 aa20.07■□□□□ 0.8
CCDC43-203ENST00000588210 SLAIN2Q9P270 581 aa20.07■□□□□ 0.8
CCDC43-203ENST00000588210 ARHGEF28Q8N1W1 1705 aaKnown RBP20.07■□□□□ 0.8
CCDC43-203ENST00000588210 SAFB2Q14151 953 aaKnown RBP eCLIP20.06■□□□□ 0.8
CCDC43-203ENST00000588210 ILDR1Q86SU0 546 aaPredicted RBP20.05■□□□□ 0.8
CCDC43-203ENST00000588210 CARD11Q9BXL7 1154 aa20.05■□□□□ 0.8
CCDC43-203ENST00000588210 CDC42BPGQ6DT37 1551 aa20.04■□□□□ 0.8
CCDC43-203ENST00000588210 CCDC7Q96M83 1385 aa20.03■□□□□ 0.8
CCDC43-203ENST00000588210 MST1RQ04912 1400 aa20.02■□□□□ 0.8
CCDC43-203ENST00000588210 EIF3AQ14152 1382 aaKnown RBP20.01■□□□□ 0.79
CCDC43-203ENST00000588210 CENPJQ9HC77 1338 aaPredicted RBP20.01■□□□□ 0.79
CCDC43-203ENST00000588210 ADGRB2O60241 1585 aa20■□□□□ 0.79
CCDC43-203ENST00000588210 MINK1Q8N4C8 1332 aaPredicted RBP20■□□□□ 0.79
CCDC43-203ENST00000588210 C1orf167Q5SNV9 1468 aa19.98■□□□□ 0.79
CCDC43-203ENST00000588210 ROBO1Q9Y6N7 1651 aa19.98■□□□□ 0.79
CCDC43-203ENST00000588210 FMN2Q9NZ56 1722 aa19.96■□□□□ 0.79
CCDC43-203ENST00000588210 WASLO00401 505 aaPredicted RBP19.96■□□□□ 0.79
CCDC43-203ENST00000588210 HNRNPUQ00839 825 aaKnown RBP eCLIP19.96■□□□□ 0.79
CCDC43-203ENST00000588210 BRINP3Q76B58 766 aa19.95■□□□□ 0.78
CCDC43-203ENST00000588210 QRICH2Q9H0J4 1663 aa19.94■□□□□ 0.78
CCDC43-203ENST00000588210 NUTM2FA1L443 756 aa19.93■□□□□ 0.78
CCDC43-203ENST00000588210 C11orf95C9JLR9 678 aaPredicted RBP19.93■□□□□ 0.78
CCDC43-203ENST00000588210 ANKARQ7Z5J8 1434 aa19.92■□□□□ 0.78
CCDC43-203ENST00000588210 HSPA1LP34931 641 aa19.91■□□□□ 0.78
CCDC43-203ENST00000588210 ORAI2Q96SN7 254 aa19.91■□□□□ 0.78
CCDC43-203ENST00000588210 ESCO1Q5FWF5 840 aa19.91■□□□□ 0.78
CCDC43-203ENST00000588210 CDK19Q9BWU1 502 aa19.91■□□□□ 0.78
CCDC43-203ENST00000588210 PRKRIP1Q9H875 184 aaPredicted RBP19.9■□□□□ 0.78
CCDC43-203ENST00000588210 SBNO2Q9Y2G9 1366 aa19.9■□□□□ 0.78
CCDC43-203ENST00000588210 TULP4Q9NRJ4 1543 aa19.9■□□□□ 0.78
CCDC43-203ENST00000588210 USP47Q96K76 1375 aa19.89■□□□□ 0.77
CCDC43-203ENST00000588210 KIF7Q2M1P5 1343 aa19.88■□□□□ 0.77
CCDC43-203ENST00000588210 EVC2Q86UK5 1308 aa19.88■□□□□ 0.77
CCDC43-203ENST00000588210 AHDC1Q5TGY3 1603 aaPredicted RBP19.87■□□□□ 0.77
CCDC43-203ENST00000588210 ST20-MTHFSA0A0A6YYL1 179 aa19.87■□□□□ 0.77
CCDC43-203ENST00000588210 USP32Q8NFA0 1604 aa19.87■□□□□ 0.77
CCDC43-203ENST00000588210 RGPD8O14715 1765 aaPredicted RBP19.87■□□□□ 0.77
CCDC43-203ENST00000588210 SLC24A1O60721 1099 aa19.87■□□□□ 0.77
CCDC43-203ENST00000588210 PRR36Q9H6K5 1346 aa19.86■□□□□ 0.77
CCDC43-203ENST00000588210 NHSL1Q5SYE7 1610 aa19.85■□□□□ 0.77
CCDC43-203ENST00000588210 SRPK2P78362 688 aaKnown RBP19.85■□□□□ 0.77
CCDC43-203ENST00000588210 NUDT16Q96DE0 195 aaKnown RBP19.85■□□□□ 0.77
CCDC43-203ENST00000588210 PHLPP1O60346 1717 aa19.85■□□□□ 0.77
CCDC43-203ENST00000588210 PHF8Q9UPP1 1060 aa19.85■□□□□ 0.77
CCDC43-203ENST00000588210 ATP7BP35670 1465 aa19.84■□□□□ 0.77
CCDC43-203ENST00000588210 CCDC184Q52MB2 194 aa19.84■□□□□ 0.77
CCDC43-203ENST00000588210 KIF1AQ12756 1690 aa19.84■□□□□ 0.77
CCDC43-203ENST00000588210 TESK2Q96S53 571 aa19.83■□□□□ 0.77
CCDC43-203ENST00000588210 NPHP3Q7Z494 1330 aa19.83■□□□□ 0.77
CCDC43-203ENST00000588210 CABP2Q9NPB3 220 aa19.83■□□□□ 0.76
CCDC43-203ENST00000588210 CCDC61Q9Y6R9 512 aa19.83■□□□□ 0.76
CCDC43-203ENST00000588210 FOXO3O43524 673 aa19.82■□□□□ 0.76
CCDC43-203ENST00000588210 DDX17Q92841 729 aaKnown RBP19.82■□□□□ 0.76
CCDC43-203ENST00000588210 ITSN1Q15811 1721 aa19.81■□□□□ 0.76
CCDC43-203ENST00000588210 ERICH6BQ5W0A0 696 aa19.81■□□□□ 0.76
CCDC43-203ENST00000588210 COL16A1Q07092 1604 aaPredicted RBP19.81■□□□□ 0.76
CCDC43-203ENST00000588210 SOS2Q07890 1332 aaPredicted RBP19.8■□□□□ 0.76
CCDC43-203ENST00000588210 ZBED9Q6R2W3 1325 aa19.8■□□□□ 0.76
CCDC43-203ENST00000588210 PMFBP1Q8TBY8 1022 aa19.8■□□□□ 0.76
CCDC43-203ENST00000588210 MRS2Q9HD23 443 aa19.79■□□□□ 0.76
CCDC43-203ENST00000588210 LRRC59Q96AG4 307 aaKnown RBP19.79■□□□□ 0.76
CCDC43-203ENST00000588210 TOPAZ1Q8N9V7 1692 aa19.78■□□□□ 0.76
CCDC43-203ENST00000588210 PUS7Q96PZ0 661 aaKnown RBP19.78■□□□□ 0.76
CCDC43-203ENST00000588210 PLEKHG3A1L390 1219 aa19.77■□□□□ 0.76
CCDC43-203ENST00000588210 ATAD2Q6PL18 1390 aa19.77■□□□□ 0.76
CCDC43-203ENST00000588210 TMF1P82094 1093 aa19.77■□□□□ 0.75
CCDC43-203ENST00000588210 RBM19Q9Y4C8 960 aaKnown RBP19.77■□□□□ 0.75
CCDC43-203ENST00000588210 PXDNQ92626 1479 aa19.76■□□□□ 0.75
CCDC43-203ENST00000588210 PSME1Q06323 249 aa19.76■□□□□ 0.75
CCDC43-203ENST00000588210 NGDNQ8NEJ9 315 aaKnown RBP19.76■□□□□ 0.75
CCDC43-203ENST00000588210 ANP32EQ9BTT0 268 aa19.76■□□□□ 0.75
CCDC43-203ENST00000588210 PPIP5K1Q6PFW1 1433 aa19.76■□□□□ 0.75
CCDC43-203ENST00000588210 KRT28Q7Z3Y7 464 aa19.75■□□□□ 0.75
CCDC43-203ENST00000588210 JCADQ9P266 1359 aa19.75■□□□□ 0.75
CCDC43-203ENST00000588210 POLR3AO14802 1390 aaPredicted RBP19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms