RNA–Protein interactions for RNA: ENST00000588030.5

CIRBP-215, Transcript of cold inducible RNA binding protein, human

APPRIS P3 TSL 5 BASIC

Gene CIRBP, Length 1,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-215	ENST00000588030	SIRT1	Q96EB6	747 aa		28.69	■■■□□ 2.18
CIRBP-215	ENST00000588030	RGS17	Q9UGC6	210 aa	Predicted RBP	28.69	■■■□□ 2.18
CIRBP-215	ENST00000588030	PLEKHH1	Q9ULM0	1364 aa		28.69	■■■□□ 2.18
CIRBP-215	ENST00000588030	ORAI2	Q96SN7	254 aa		28.69	■■■□□ 2.18
CIRBP-215	ENST00000588030	STAC3	Q96MF2	364 aa		28.67	■■■□□ 2.18
CIRBP-215	ENST00000588030	SOCS7	O14512	581 aa		28.64	■■■□□ 2.18
CIRBP-215	ENST00000588030	LAMC1	P11047	1609 aa		28.61	■■■□□ 2.17
CIRBP-215	ENST00000588030	LRRC59	Q96AG4	307 aa	Known RBP	28.6	■■■□□ 2.17
CIRBP-215	ENST00000588030	SPATA31A6	Q5VVP1	1343 aa		28.6	■■■□□ 2.17
CIRBP-215	ENST00000588030	KNDC1	Q76NI1	1749 aa		28.59	■■■□□ 2.17
CIRBP-215	ENST00000588030	PRAM1	Q96QH2	718 aa		28.58	■■■□□ 2.17
CIRBP-215	ENST00000588030	NUTM2F	A1L443	756 aa		28.57	■■■□□ 2.16
CIRBP-215	ENST00000588030	ESCO1	Q5FWF5	840 aa		28.57	■■■□□ 2.16
CIRBP-215	ENST00000588030	L3MBTL2	Q969R5	705 aa		28.57	■■■□□ 2.16
CIRBP-215	ENST00000588030	NHSL1	Q5SYE7	1610 aa		28.56	■■■□□ 2.16
CIRBP-215	ENST00000588030	CDC42BPG	Q6DT37	1551 aa		28.55	■■■□□ 2.16
CIRBP-215	ENST00000588030	SAFB2	Q14151	953 aa	Known RBP eCLIP	28.55	■■■□□ 2.16
CIRBP-215	ENST00000588030	TRAK1	Q9UPV9	953 aa		28.55	■■■□□ 2.16
CIRBP-215	ENST00000588030	ADGRB1	O14514	1584 aa		28.55	■■■□□ 2.16
CIRBP-215	ENST00000588030	SOS2	Q07890	1332 aa	Predicted RBP	28.54	■■■□□ 2.16
CIRBP-215	ENST00000588030	POTEA	Q6S8J7	498 aa		28.53	■■■□□ 2.16
CIRBP-215	ENST00000588030	LRP6	O75581	1613 aa		28.52	■■■□□ 2.16
CIRBP-215	ENST00000588030	POGK	Q9P215	609 aa		28.52	■■■□□ 2.16
CIRBP-215	ENST00000588030	NUTM2B	A6NNL0	878 aa	Predicted RBP	28.51	■■■□□ 2.15
CIRBP-215	ENST00000588030	NUTM2E	B1AL46	878 aa	Predicted RBP	28.51	■■■□□ 2.15
CIRBP-215	ENST00000588030	NUTM2A	Q8IVF1	878 aa	Predicted RBP	28.51	■■■□□ 2.15
CIRBP-215	ENST00000588030	SHPRH	Q149N8	1683 aa		28.5	■■■□□ 2.15
CIRBP-215	ENST00000588030	FOXO3	O43524	673 aa		28.49	■■■□□ 2.15
CIRBP-215	ENST00000588030	DLC1	Q96QB1	1528 aa		28.49	■■■□□ 2.15
CIRBP-215	ENST00000588030	PNPLA6	Q8IY17	1366 aa		28.48	■■■□□ 2.15
CIRBP-215	ENST00000588030	MEX3C	Q5U5Q3	659 aa	Known RBP	28.47	■■■□□ 2.15
CIRBP-215	ENST00000588030	NPHP3	Q7Z494	1330 aa		28.46	■■■□□ 2.15
CIRBP-215	ENST00000588030	XPC	Q01831	940 aa	Predicted RBP	28.43	■■■□□ 2.14
CIRBP-215	ENST00000588030	NBPF1	Q3BBV0	1214 aa		28.43	■■■□□ 2.14
CIRBP-215	ENST00000588030	TONSL	Q96HA7	1378 aa		28.43	■■■□□ 2.14
CIRBP-215	ENST00000588030	FMN2	Q9NZ56	1722 aa		28.41	■■■□□ 2.14
CIRBP-215	ENST00000588030	HIRIP3	Q9BW71	556 aa	Predicted RBP	28.41	■■■□□ 2.14
CIRBP-215	ENST00000588030	MINK1	Q8N4C8	1332 aa	Predicted RBP	28.41	■■■□□ 2.14
CIRBP-215	ENST00000588030	PHF8	Q9UPP1	1060 aa		28.38	■■■□□ 2.13
CIRBP-215	ENST00000588030	KIAA1210	Q9ULL0	1709 aa		28.38	■■■□□ 2.13
CIRBP-215	ENST00000588030	PXDN	Q92626	1479 aa		28.38	■■■□□ 2.13
CIRBP-215	ENST00000588030	ZNF772	Q68DY9	489 aa	Predicted RBP	28.36	■■■□□ 2.13
CIRBP-215	ENST00000588030	KRT28	Q7Z3Y7	464 aa		28.35	■■■□□ 2.13
CIRBP-215	ENST00000588030	WASL	O00401	505 aa	Predicted RBP	28.34	■■■□□ 2.13
CIRBP-215	ENST00000588030	ADAMTS2	O95450	1211 aa		28.33	■■■□□ 2.13
CIRBP-215	ENST00000588030	AFF2	P51816	1311 aa		28.32	■■■□□ 2.12
CIRBP-215	ENST00000588030	NBPF8	Q3BBV2	869 aa		28.32	■■■□□ 2.12
CIRBP-215	ENST00000588030	C8orf37	Q96NL8	207 aa		28.32	■■■□□ 2.12
CIRBP-215	ENST00000588030	PRR36	Q9H6K5	1346 aa		28.31	■■■□□ 2.12
CIRBP-215	ENST00000588030	PMFBP1	Q8TBY8	1022 aa		28.31	■■■□□ 2.12
CIRBP-215	ENST00000588030	ARHGEF28	Q8N1W1	1705 aa	Known RBP	28.31	■■■□□ 2.12
CIRBP-215	ENST00000588030	ADGRB2	O60241	1585 aa		28.3	■■■□□ 2.12
CIRBP-215	ENST00000588030	RGPD8	O14715	1765 aa	Predicted RBP	28.3	■■■□□ 2.12
CIRBP-215	ENST00000588030	SPATA31A3	Q5VYP0	1347 aa		28.3	■■■□□ 2.12
CIRBP-215	ENST00000588030	ANKAR	Q7Z5J8	1434 aa		28.3	■■■□□ 2.12
CIRBP-215	ENST00000588030	ROCK2	O75116	1388 aa	Known RBP	28.29	■■■□□ 2.12
CIRBP-215	ENST00000588030	TRPM1	Q7Z4N2	1603 aa		28.29	■■■□□ 2.12
CIRBP-215	ENST00000588030	CCER1	Q8TC90	406 aa	Predicted RBP	28.28	■■■□□ 2.12
CIRBP-215	ENST00000588030	PSME1	Q06323	249 aa		28.27	■■■□□ 2.12
CIRBP-215	ENST00000588030	NGLY1	Q96IV0	654 aa		28.27	■■■□□ 2.12
CIRBP-215	ENST00000588030	KIF1A	Q12756	1690 aa		28.26	■■■□□ 2.11
CIRBP-215	ENST00000588030	USP32	Q8NFA0	1604 aa		28.26	■■■□□ 2.11
CIRBP-215	ENST00000588030	EIF3A	Q14152	1382 aa	Known RBP	28.24	■■■□□ 2.11
CIRBP-215	ENST00000588030	CDK19	Q9BWU1	502 aa		28.23	■■■□□ 2.11
CIRBP-215	ENST00000588030	COL22A1	Q8NFW1	1626 aa	Predicted RBP	28.23	■■■□□ 2.11
CIRBP-215	ENST00000588030	NUDT16	Q96DE0	195 aa	Known RBP	28.22	■■■□□ 2.11
CIRBP-215	ENST00000588030	QTRT2	Q9H974	415 aa	Known RBP	28.22	■■■□□ 2.11
CIRBP-215	ENST00000588030	TULP4	Q9NRJ4	1543 aa		28.21	■■■□□ 2.11
CIRBP-215	ENST00000588030	RXRB	P28702	533 aa		28.21	■■■□□ 2.11
CIRBP-215	ENST00000588030	SBNO1	A3KN83	1393 aa		28.2	■■■□□ 2.11
CIRBP-215	ENST00000588030	FNBP4	Q8N3X1	1017 aa	Predicted RBP	28.2	■■■□□ 2.1
CIRBP-215	ENST00000588030	CLSPN	Q9HAW4	1339 aa		28.2	■■■□□ 2.1
CIRBP-215	ENST00000588030	CENPJ	Q9HC77	1338 aa	Predicted RBP	28.19	■■■□□ 2.1
CIRBP-215	ENST00000588030	CARD11	Q9BXL7	1154 aa		28.17	■■■□□ 2.1
CIRBP-215	ENST00000588030	TNS3	Q68CZ2	1445 aa		28.16	■■■□□ 2.1
CIRBP-215	ENST00000588030	NGDN	Q8NEJ9	315 aa	Known RBP	28.16	■■■□□ 2.1
CIRBP-215	ENST00000588030	USP21	Q9UK80	565 aa		28.16	■■■□□ 2.1
CIRBP-215	ENST00000588030	LMOD2	Q6P5Q4	547 aa		28.15	■■■□□ 2.1
CIRBP-215	ENST00000588030	CABLES1	Q8TDN4	633 aa		28.15	■■■□□ 2.1
CIRBP-215	ENST00000588030	GPRASP1	Q5JY77	1395 aa		28.13	■■■□□ 2.09
CIRBP-215	ENST00000588030	ATP7B	P35670	1465 aa		28.13	■■■□□ 2.09
CIRBP-215	ENST00000588030	RALGAPB	Q86X10	1494 aa		28.13	■■■□□ 2.09
CIRBP-215	ENST00000588030	CCDC61	Q9Y6R9	512 aa		28.13	■■■□□ 2.09
CIRBP-215	ENST00000588030	PLEKHG5	O94827	1062 aa		28.12	■■■□□ 2.09
CIRBP-215	ENST00000588030	RBM6	P78332	1123 aa	Known RBP	28.12	■■■□□ 2.09
CIRBP-215	ENST00000588030	QRICH2	Q9H0J4	1663 aa		28.11	■■■□□ 2.09
CIRBP-215	ENST00000588030	ARHGEF10	O15013	1369 aa		28.1	■■■□□ 2.09
CIRBP-215	ENST00000588030	PLEKHG3	A1L390	1219 aa		28.09	■■■□□ 2.09
CIRBP-215	ENST00000588030	CABP2	Q9NPB3	220 aa		28.08	■■■□□ 2.09
CIRBP-215	ENST00000588030	TRPC5	Q9UL62	973 aa	Predicted RBP	28.08	■■■□□ 2.09
CIRBP-215	ENST00000588030	SRPK2	P78362	688 aa	Known RBP	28.08	■■■□□ 2.08
CIRBP-215	ENST00000588030	BCL9L	Q86UU0	1499 aa		28.07	■■■□□ 2.08
CIRBP-215	ENST00000588030	HAP1	P54257	671 aa	Predicted RBP	28.06	■■■□□ 2.08
CIRBP-215	ENST00000588030	TIMELESS	Q9UNS1	1208 aa		28.06	■■■□□ 2.08
CIRBP-215	ENST00000588030	ACE	P12821	1306 aa		28.05	■■■□□ 2.08
CIRBP-215	ENST00000588030	PAK3	O75914	559 aa	Predicted RBP	28.05	■■■□□ 2.08
CIRBP-215	ENST00000588030	CDK12	Q9NYV4	1490 aa	Predicted RBP	28.05	■■■□□ 2.08
CIRBP-215	ENST00000588030	TRPM3	Q9HCF6	1732 aa	Predicted RBP	28.04	■■■□□ 2.08
CIRBP-215	ENST00000588030	POLR3A	O14802	1390 aa	Predicted RBP	28.03	■■■□□ 2.08
CIRBP-215	ENST00000588030	ATRN	O75882	1429 aa		28.03	■■■□□ 2.08

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