RNA–Protein interactions for RNA: ENST00000587303.5

PTPRS-204, Transcript of protein tyrosine phosphatase, receptor type S, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRS, Length 6,353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRS-204ENST00000587303 ZFYVE27Q5T4F4 411 aa16.6■□□□□ 0.25
PTPRS-204ENST00000587303 WWC2Q6AWC2 1192 aa16.6■□□□□ 0.25
PTPRS-204ENST00000587303 CCDC70Q6NSX1 233 aa16.6■□□□□ 0.25
PTPRS-204ENST00000587303 SAFBQ15424 915 aaKnown RBP eCLIP16.6■□□□□ 0.25
PTPRS-204ENST00000587303 IPO9Q96P70 1041 aaKnown RBP16.6■□□□□ 0.25
PTPRS-204ENST00000587303 HOOK1Q9UJC3 728 aaKnown RBP16.6■□□□□ 0.25
PTPRS-204ENST00000587303 CT47A1Q5JQC4 288 aaPredicted RBP16.6■□□□□ 0.25
PTPRS-204ENST00000587303 ROCK1Q13464 1354 aa16.6■□□□□ 0.25
PTPRS-204ENST00000587303 SKIDA1Q1XH10 827 aa16.59■□□□□ 0.25
PTPRS-204ENST00000587303 ODF2Q5BJF6 829 aa16.59■□□□□ 0.25
PTPRS-204ENST00000587303 GGNBP2Q9H3C7 697 aa16.59■□□□□ 0.25
PTPRS-204ENST00000587303 RRP12Q5JTH9 1297 aaKnown RBP16.59■□□□□ 0.25
PTPRS-204ENST00000587303 HSP90AB4PQ58FF6 505 aa16.58■□□□□ 0.25
PTPRS-204ENST00000587303 DDX49Q9Y6V7 483 aaKnown RBP16.58■□□□□ 0.25
PTPRS-204ENST00000587303 REC8O95072 547 aa16.58■□□□□ 0.24
PTPRS-204ENST00000587303 ZNF771Q7L3S4 317 aaPredicted RBP16.58■□□□□ 0.24
PTPRS-204ENST00000587303 PAF1Q8N7H5 531 aa16.58■□□□□ 0.24
PTPRS-204ENST00000587303 USP47Q96K76 1375 aa16.58■□□□□ 0.24
PTPRS-204ENST00000587303 ERC2O15083 957 aa16.58■□□□□ 0.24
PTPRS-204ENST00000587303 MIA2Q96PC5 1412 aa16.58■□□□□ 0.24
PTPRS-204ENST00000587303 DDX19BQ9UMR2 479 aa16.58■□□□□ 0.24
PTPRS-204ENST00000587303 TOM1L2Q6ZVM7 507 aa16.57■□□□□ 0.24
PTPRS-204ENST00000587303 DDX54Q8TDD1 881 aaKnown RBP16.57■□□□□ 0.24
PTPRS-204ENST00000587303 TMEM132EQ6IEE7 984 aa16.57■□□□□ 0.24
PTPRS-204ENST00000587303 ZNF644Q9H582 1327 aaPredicted RBP16.57■□□□□ 0.24
PTPRS-204ENST00000587303 GNAI1P63096 354 aa16.56■□□□□ 0.24
PTPRS-204ENST00000587303 BICD2Q8TD16 824 aa16.56■□□□□ 0.24
PTPRS-204ENST00000587303 BRMS1Q9HCU9 246 aa16.56■□□□□ 0.24
PTPRS-204ENST00000587303 TBC1D2BQ9UPU7 963 aa16.56■□□□□ 0.24
PTPRS-204ENST00000587303 HOMER1Q86YM7 354 aa16.55■□□□□ 0.24
PTPRS-204ENST00000587303 ATP2B2Q01814 1243 aa16.55■□□□□ 0.24
PTPRS-204ENST00000587303 PLEKHO1Q53GL0 409 aaPredicted RBP16.55■□□□□ 0.24
PTPRS-204ENST00000587303 TATP17735 454 aaPredicted RBP16.55■□□□□ 0.24
PTPRS-204ENST00000587303 RBM5P52756 815 aaKnown RBP eCLIP16.55■□□□□ 0.248e-6■■□□□ 11.9
PTPRS-204ENST00000587303 UBTFL1P0CB47 393 aaPredicted RBP16.54■□□□□ 0.24
PTPRS-204ENST00000587303 CENPQQ7L2Z9 268 aaPredicted RBP16.54■□□□□ 0.24
PTPRS-204ENST00000587303 DZIP1LQ8IYY4 767 aaKnown RBP16.54■□□□□ 0.24
PTPRS-204ENST00000587303 EPS15P42566 896 aa16.54■□□□□ 0.24
PTPRS-204ENST00000587303 RRP1P56182 461 aaKnown RBP16.53■□□□□ 0.24
PTPRS-204ENST00000587303 VPS37CA5D8V6 355 aaPredicted RBP16.53■□□□□ 0.24
PTPRS-204ENST00000587303 SMG6Q86US8 1419 aaKnown RBP16.53■□□□□ 0.24
PTPRS-204ENST00000587303 CNNM1Q9NRU3 951 aa16.53■□□□□ 0.24
PTPRS-204ENST00000587303 DDX11L8A8MPP1 907 aa16.53■□□□□ 0.24
PTPRS-204ENST00000587303 RUNDC1Q96C34 613 aa16.53■□□□□ 0.24
PTPRS-204ENST00000587303 CALRP27797 417 aaKnown RBP16.52■□□□□ 0.24
PTPRS-204ENST00000587303 TTLL5Q6EMB2 1281 aa16.52■□□□□ 0.24
PTPRS-204ENST00000587303 XBP1P17861 261 aa16.52■□□□□ 0.24
PTPRS-204ENST00000587303 THEMISQ8N1K5 641 aaPredicted RBP16.52■□□□□ 0.23
PTPRS-204ENST00000587303 CABP4P57796 275 aa16.52■□□□□ 0.23
PTPRS-204ENST00000587303 SLC3A2P08195 630 aaKnown RBP16.51■□□□□ 0.23
PTPRS-204ENST00000587303 HSP90AA2PQ14568 343 aaPredicted RBP16.51■□□□□ 0.23
PTPRS-204ENST00000587303 GPS2Q13227 327 aa16.51■□□□□ 0.23
PTPRS-204ENST00000587303 HSP90AB2PQ58FF8 381 aa16.51■□□□□ 0.23
PTPRS-204ENST00000587303 DNAJC2Q99543 621 aaKnown RBP16.51■□□□□ 0.23
PTPRS-204ENST00000587303 RAD54L2Q9Y4B4 1467 aa16.5■□□□□ 0.23
PTPRS-204ENST00000587303 PDE4AP27815 886 aa16.5■□□□□ 0.23
PTPRS-204ENST00000587303 SART3Q15020 963 aaKnown RBP16.5■□□□□ 0.23
PTPRS-204ENST00000587303 GNL3LQ9NVN8 582 aaKnown RBP16.49■□□□□ 0.23
PTPRS-204ENST00000587303 SMC3Q9UQE7 1217 aa16.49■□□□□ 0.23
PTPRS-204ENST00000587303 FAM161AQ3B820 660 aa16.49■□□□□ 0.23
PTPRS-204ENST00000587303 PRKRIP1Q9H875 184 aaPredicted RBP16.49■□□□□ 0.23
PTPRS-204ENST00000587303 GAPVD1Q14C86 1478 aa16.49■□□□□ 0.23
PTPRS-204ENST00000587303 FSD1Q9BTV5 496 aa16.49■□□□□ 0.23
PTPRS-204ENST00000587303 GAS2L2Q8NHY3 880 aa16.48■□□□□ 0.23
PTPRS-204ENST00000587303 TTC39AQ5SRH9 613 aa16.47■□□□□ 0.23
PTPRS-204ENST00000587303 CCDC30Q5VVM6 783 aa16.47■□□□□ 0.23
PTPRS-204ENST00000587303 DHX37Q8IY37 1157 aaKnown RBP16.47■□□□□ 0.23
PTPRS-204ENST00000587303 IBSPP21815 317 aaPredicted RBP16.47■□□□□ 0.23
PTPRS-204ENST00000587303 OFD1O75665 1012 aa16.47■□□□□ 0.23
PTPRS-204ENST00000587303 INTS3Q68E01 1043 aaKnown RBP16.47■□□□□ 0.23
PTPRS-204ENST00000587303 RUFY1Q96T51 708 aa16.46■□□□□ 0.23
PTPRS-204ENST00000587303 ANKLE2Q86XL3 938 aa16.46■□□□□ 0.23
PTPRS-204ENST00000587303 CDK5RAP3Q96JB5 506 aa16.46■□□□□ 0.23
PTPRS-204ENST00000587303 VSIG10Q8N0Z9 540 aa16.46■□□□□ 0.22
PTPRS-204ENST00000587303 ARHGAP5Q13017 1502 aa16.46■□□□□ 0.22
PTPRS-204ENST00000587303 STK11IPQ8N1F8 1099 aa16.45■□□□□ 0.22
PTPRS-204ENST00000587303 PDILTQ8N807 584 aa16.45■□□□□ 0.22
PTPRS-204ENST00000587303 PRDM11Q9NQV5 511 aa16.45■□□□□ 0.22
PTPRS-204ENST00000587303 ATAD2BQ9ULI0 1458 aa16.45■□□□□ 0.22
PTPRS-204ENST00000587303 AFAP1Q8N556 730 aa16.45■□□□□ 0.22
PTPRS-204ENST00000587303 NINLQ9Y2I6 1382 aa16.45■□□□□ 0.22
PTPRS-204ENST00000587303 BICDL1Q6ZP65 573 aa16.44■□□□□ 0.22
PTPRS-204ENST00000587303 CCDC73Q6ZRK6 1079 aa16.44■□□□□ 0.22
PTPRS-204ENST00000587303 ATP2B1P20020 1258 aa16.44■□□□□ 0.22
PTPRS-204ENST00000587303 ZSCAN29Q8IWY8 852 aaPredicted RBP16.44■□□□□ 0.22
PTPRS-204ENST00000587303 PANK1Q8TE04 598 aa16.44■□□□□ 0.22
PTPRS-204ENST00000587303 LNPKQ9C0E8 428 aa16.44■□□□□ 0.22
PTPRS-204ENST00000587303 PRAM1Q96QH2 718 aa16.43■□□□□ 0.22
PTPRS-204ENST00000587303 SPG7Q9UQ90 795 aa16.43■□□□□ 0.22
PTPRS-204ENST00000587303 KRT18P05783 430 aaKnown RBP16.43■□□□□ 0.22
PTPRS-204ENST00000587303 CNTROBQ8N137 903 aa16.43■□□□□ 0.22
PTPRS-204ENST00000587303 SMARCA4P51532 1647 aa16.43■□□□□ 0.22
PTPRS-204ENST00000587303 MYOM3Q5VTT5 1437 aa16.43■□□□□ 0.22
PTPRS-204ENST00000587303 CCDC158Q5M9N0 1113 aa16.43■□□□□ 0.22
PTPRS-204ENST00000587303 SASS6Q6UVJ0 657 aa16.43■□□□□ 0.22
PTPRS-204ENST00000587303 FAM13BQ9NYF5 915 aa16.43■□□□□ 0.22
PTPRS-204ENST00000587303 CLASRPQ8N2M8 674 aaKnown RBP16.43■□□□□ 0.22
PTPRS-204ENST00000587303 SURF6O75683 361 aaKnown RBP16.42■□□□□ 0.22
PTPRS-204ENST00000587303 PAXIP1Q6ZW49 1069 aaPredicted RBP16.42■□□□□ 0.22
PTPRS-204ENST00000587303 XPCQ01831 940 aaPredicted RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms