RNA–Protein interactions for RNA: ENST00000587197.1

DNMT1-212, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 809 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-212ENST00000587197 ABCC11Q96J66 1382 aa24.78■■□□□ 1.56
DNMT1-212ENST00000587197 ASXL1Q8IXJ9 1541 aa24.77■■□□□ 1.56
DNMT1-212ENST00000587197 TMEM132EQ6IEE7 984 aa24.77■■□□□ 1.56
DNMT1-212ENST00000587197 SPATA31A6Q5VVP1 1343 aa24.76■■□□□ 1.55
DNMT1-212ENST00000587197 TECPR2O15040 1411 aa24.76■■□□□ 1.55
DNMT1-212ENST00000587197 YTHDC2Q9H6S0 1430 aaKnown RBP24.75■■□□□ 1.55
DNMT1-212ENST00000587197 SIRT1Q96EB6 747 aa24.74■■□□□ 1.55
DNMT1-212ENST00000587197 C1orf167Q5SNV9 1468 aa24.74■■□□□ 1.55
DNMT1-212ENST00000587197 ADGRB1O14514 1584 aa24.74■■□□□ 1.55
DNMT1-212ENST00000587197 LRRC59Q96AG4 307 aaKnown RBP24.72■■□□□ 1.55
DNMT1-212ENST00000587197 KIAA1210Q9ULL0 1709 aa24.72■■□□□ 1.55
DNMT1-212ENST00000587197 KNDC1Q76NI1 1749 aa24.71■■□□□ 1.55
DNMT1-212ENST00000587197 WAPLQ7Z5K2 1190 aa24.7■■□□□ 1.54
DNMT1-212ENST00000587197 NHSL1Q5SYE7 1610 aa24.69■■□□□ 1.54
DNMT1-212ENST00000587197 NBPF8Q3BBV2 869 aa24.69■■□□□ 1.54
DNMT1-212ENST00000587197 CDC42BPGQ6DT37 1551 aa24.68■■□□□ 1.54
DNMT1-212ENST00000587197 SHPRHQ149N8 1683 aa24.68■■□□□ 1.54
DNMT1-212ENST00000587197 NBPF1Q3BBV0 1214 aa24.67■■□□□ 1.54
DNMT1-212ENST00000587197 MEX3CQ5U5Q3 659 aaKnown RBP24.67■■□□□ 1.54
DNMT1-212ENST00000587197 ORAI2Q96SN7 254 aa24.66■■□□□ 1.54
DNMT1-212ENST00000587197 RGS17Q9UGC6 210 aaPredicted RBP24.66■■□□□ 1.54
DNMT1-212ENST00000587197 DLC1Q96QB1 1528 aa24.66■■□□□ 1.54
DNMT1-212ENST00000587197 ESCO1Q5FWF5 840 aa24.64■■□□□ 1.54
DNMT1-212ENST00000587197 DDX17Q92841 729 aaKnown RBP24.63■■□□□ 1.53
DNMT1-212ENST00000587197 GPRASP1Q5JY77 1395 aa24.63■■□□□ 1.53
DNMT1-212ENST00000587197 PLEKHH1Q9ULM0 1364 aa24.63■■□□□ 1.53
DNMT1-212ENST00000587197 POGKQ9P215 609 aa24.61■■□□□ 1.53
DNMT1-212ENST00000587197 TRAK1Q9UPV9 953 aa24.61■■□□□ 1.53
DNMT1-212ENST00000587197 TRPM1Q7Z4N2 1603 aa24.61■■□□□ 1.53
DNMT1-212ENST00000587197 ROCK2O75116 1388 aaKnown RBP24.6■■□□□ 1.53
DNMT1-212ENST00000587197 NUTM2BA6NNL0 878 aaPredicted RBP24.6■■□□□ 1.53
DNMT1-212ENST00000587197 NUTM2EB1AL46 878 aaPredicted RBP24.6■■□□□ 1.53
DNMT1-212ENST00000587197 NUTM2AQ8IVF1 878 aaPredicted RBP24.6■■□□□ 1.53
DNMT1-212ENST00000587197 SOS2Q07890 1332 aaPredicted RBP24.6■■□□□ 1.53
DNMT1-212ENST00000587197 NPHP3Q7Z494 1330 aa24.6■■□□□ 1.53
DNMT1-212ENST00000587197 RALGAPBQ86X10 1494 aa24.59■■□□□ 1.53
DNMT1-212ENST00000587197 PRAM1Q96QH2 718 aa24.59■■□□□ 1.53
DNMT1-212ENST00000587197 LRP6O75581 1613 aa24.58■■□□□ 1.53
DNMT1-212ENST00000587197 NUTM2FA1L443 756 aa24.57■■□□□ 1.52
DNMT1-212ENST00000587197 ZNF772Q68DY9 489 aaPredicted RBP24.57■■□□□ 1.52
DNMT1-212ENST00000587197 PNPLA6Q8IY17 1366 aa24.56■■□□□ 1.52
DNMT1-212ENST00000587197 POTEAQ6S8J7 498 aa24.56■■□□□ 1.52
DNMT1-212ENST00000587197 SAFB2Q14151 953 aaKnown RBP eCLIP24.55■■□□□ 1.52
DNMT1-212ENST00000587197 FMN2Q9NZ56 1722 aa24.53■■□□□ 1.52
DNMT1-212ENST00000587197 FOXO3O43524 673 aa24.53■■□□□ 1.52
DNMT1-212ENST00000587197 CARD11Q9BXL7 1154 aa24.52■■□□□ 1.52
DNMT1-212ENST00000587197 KIF1AQ12756 1690 aa24.48■■□□□ 1.51
DNMT1-212ENST00000587197 EIF3AQ14152 1382 aaKnown RBP24.48■■□□□ 1.51
DNMT1-212ENST00000587197 ARHGEF28Q8N1W1 1705 aaKnown RBP24.48■■□□□ 1.51
DNMT1-212ENST00000587197 CENPJQ9HC77 1338 aaPredicted RBP24.47■■□□□ 1.51
DNMT1-212ENST00000587197 PHF8Q9UPP1 1060 aa24.46■■□□□ 1.51
DNMT1-212ENST00000587197 PXDNQ92626 1479 aa24.45■■□□□ 1.51
DNMT1-212ENST00000587197 XPCQ01831 940 aaPredicted RBP24.45■■□□□ 1.5
DNMT1-212ENST00000587197 C8orf37Q96NL8 207 aa24.45■■□□□ 1.5
DNMT1-212ENST00000587197 ANKARQ7Z5J8 1434 aa24.44■■□□□ 1.5
DNMT1-212ENST00000587197 AFF2P51816 1311 aa24.44■■□□□ 1.5
DNMT1-212ENST00000587197 MINK1Q8N4C8 1332 aaPredicted RBP24.44■■□□□ 1.5
DNMT1-212ENST00000587197 PSME1Q06323 249 aa24.44■■□□□ 1.5
DNMT1-212ENST00000587197 ADGRB2O60241 1585 aa24.44■■□□□ 1.5
DNMT1-212ENST00000587197 ADAMTS2O95450 1211 aa24.43■■□□□ 1.5
DNMT1-212ENST00000587197 KRT28Q7Z3Y7 464 aa24.43■■□□□ 1.5
DNMT1-212ENST00000587197 NGLY1Q96IV0 654 aa24.42■■□□□ 1.5
DNMT1-212ENST00000587197 HIRIP3Q9BW71 556 aaPredicted RBP24.42■■□□□ 1.5
DNMT1-212ENST00000587197 COL22A1Q8NFW1 1626 aaPredicted RBP24.41■■□□□ 1.5
DNMT1-212ENST00000587197 WASLO00401 505 aaPredicted RBP24.4■■□□□ 1.5
DNMT1-212ENST00000587197 RXRBP28702 533 aa24.4■■□□□ 1.5
DNMT1-212ENST00000587197 SBNO2Q9Y2G9 1366 aa24.39■■□□□ 1.49
DNMT1-212ENST00000587197 RGPD8O14715 1765 aaPredicted RBP24.39■■□□□ 1.49
DNMT1-212ENST00000587197 SPATA31A3Q5VYP0 1347 aa24.38■■□□□ 1.49
DNMT1-212ENST00000587197 USP47Q96K76 1375 aa24.35■■□□□ 1.49
DNMT1-212ENST00000587197 PMFBP1Q8TBY8 1022 aa24.35■■□□□ 1.49
DNMT1-212ENST00000587197 QTRT2Q9H974 415 aaKnown RBP24.35■■□□□ 1.49
DNMT1-212ENST00000587197 TULP4Q9NRJ4 1543 aa24.35■■□□□ 1.49
DNMT1-212ENST00000587197 SLC24A1O60721 1099 aa24.34■■□□□ 1.49
DNMT1-212ENST00000587197 SBNO1A3KN83 1393 aa24.33■■□□□ 1.49
DNMT1-212ENST00000587197 CDK19Q9BWU1 502 aa24.33■■□□□ 1.49
DNMT1-212ENST00000587197 USP32Q8NFA0 1604 aa24.32■■□□□ 1.48
DNMT1-212ENST00000587197 HAP1P54257 671 aaPredicted RBP24.32■■□□□ 1.48
DNMT1-212ENST00000587197 USP21Q9UK80 565 aa24.32■■□□□ 1.48
DNMT1-212ENST00000587197 TNS3Q68CZ2 1445 aa24.32■■□□□ 1.48
DNMT1-212ENST00000587197 ST20-MTHFSA0A0A6YYL1 179 aa24.31■■□□□ 1.48
DNMT1-212ENST00000587197 RBM6P78332 1123 aaKnown RBP24.31■■□□□ 1.48
DNMT1-212ENST00000587197 LMOD2Q6P5Q4 547 aa24.31■■□□□ 1.48
DNMT1-212ENST00000587197 FNBP4Q8N3X1 1017 aaPredicted RBP24.31■■□□□ 1.48
DNMT1-212ENST00000587197 EVC2Q86UK5 1308 aa24.31■■□□□ 1.48
DNMT1-212ENST00000587197 QRICH2Q9H0J4 1663 aa24.3■■□□□ 1.48
DNMT1-212ENST00000587197 ARHGEF10O15013 1369 aa24.3■■□□□ 1.48
DNMT1-212ENST00000587197 NGDNQ8NEJ9 315 aaKnown RBP24.3■■□□□ 1.48
DNMT1-212ENST00000587197 TESK2Q96S53 571 aa24.3■■□□□ 1.48
DNMT1-212ENST00000587197 CDK12Q9NYV4 1490 aaPredicted RBP24.3■■□□□ 1.48
DNMT1-212ENST00000587197 PRR36Q9H6K5 1346 aa24.3■■□□□ 1.48
DNMT1-212ENST00000587197 TRPC5Q9UL62 973 aaPredicted RBP24.29■■□□□ 1.48
DNMT1-212ENST00000587197 NUDT16Q96DE0 195 aaKnown RBP24.28■■□□□ 1.48
DNMT1-212ENST00000587197 MARF1Q9Y4F3 1742 aaKnown RBP24.25■■□□□ 1.47
DNMT1-212ENST00000587197 EIF4G2P78344 907 aaKnown RBP eCLIP24.25■■□□□ 1.47
DNMT1-212ENST00000587197 SRPK2P78362 688 aaKnown RBP24.25■■□□□ 1.47
DNMT1-212ENST00000587197 PUS7Q96PZ0 661 aaKnown RBP24.25■■□□□ 1.47
DNMT1-212ENST00000587197 CCDC61Q9Y6R9 512 aa24.25■■□□□ 1.47
DNMT1-212ENST00000587197 ATP7BP35670 1465 aa24.25■■□□□ 1.47
DNMT1-212ENST00000587197 ITSN1Q15811 1721 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms