RNA–Protein interactions for RNA: ENST00000585920.1

DNMT1-205, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-205ENST00000585920 WAPLQ7Z5K2 1190 aa18.6■□□□□ 0.57
DNMT1-205ENST00000585920 POGKQ9P215 609 aa18.6■□□□□ 0.57
DNMT1-205ENST00000585920 ADGRB1O14514 1584 aa18.59■□□□□ 0.57
DNMT1-205ENST00000585920 CARD11Q9BXL7 1154 aa18.59■□□□□ 0.57
DNMT1-205ENST00000585920 PTCH1Q13635 1447 aa18.58■□□□□ 0.57
DNMT1-205ENST00000585920 PRAM1Q96QH2 718 aa18.58■□□□□ 0.56
DNMT1-205ENST00000585920 TECPR2O15040 1411 aa18.57■□□□□ 0.56
DNMT1-205ENST00000585920 NCOA3Q9Y6Q9 1424 aa18.57■□□□□ 0.56
DNMT1-205ENST00000585920 XRN1Q8IZH2 1706 aaKnown RBP18.57■□□□□ 0.56
DNMT1-205ENST00000585920 KIAA1210Q9ULL0 1709 aa18.57■□□□□ 0.56
DNMT1-205ENST00000585920 C19orf44Q9H6X5 657 aa18.57■□□□□ 0.56
DNMT1-205ENST00000585920 MSH6P52701 1360 aa18.55■□□□□ 0.56
DNMT1-205ENST00000585920 SAFB2Q14151 953 aaKnown RBP eCLIP18.55■□□□□ 0.56
DNMT1-205ENST00000585920 FAM135BQ49AJ0 1406 aa18.55■□□□□ 0.56
DNMT1-205ENST00000585920 IQSEC2Q5JU85 1478 aa18.54■□□□□ 0.56
DNMT1-205ENST00000585920 RALGAPBQ86X10 1494 aa18.54■□□□□ 0.56
DNMT1-205ENST00000585920 TRPM1Q7Z4N2 1603 aa18.54■□□□□ 0.56
DNMT1-205ENST00000585920 PLEKHH1Q9ULM0 1364 aa18.54■□□□□ 0.56
DNMT1-205ENST00000585920 TOM1O60784 492 aa18.53■□□□□ 0.56
DNMT1-205ENST00000585920 ATF3P18847 181 aa18.53■□□□□ 0.56
DNMT1-205ENST00000585920 GPRASP1Q5JY77 1395 aa18.53■□□□□ 0.56
DNMT1-205ENST00000585920 UBAP1LF5GYI3 381 aa18.52■□□□□ 0.56
DNMT1-205ENST00000585920 DLC1Q96QB1 1528 aa18.52■□□□□ 0.56
DNMT1-205ENST00000585920 CADPS2Q86UW7 1296 aa18.51■□□□□ 0.55
DNMT1-205ENST00000585920 EIF3AQ14152 1382 aaKnown RBP18.49■□□□□ 0.55
DNMT1-205ENST00000585920 KNDC1Q76NI1 1749 aa18.49■□□□□ 0.55
DNMT1-205ENST00000585920 ADGRL3Q9HAR2 1447 aa18.49■□□□□ 0.55
DNMT1-205ENST00000585920 MINK1Q8N4C8 1332 aaPredicted RBP18.49■□□□□ 0.55
DNMT1-205ENST00000585920 CENPJQ9HC77 1338 aaPredicted RBP18.49■□□□□ 0.55
DNMT1-205ENST00000585920 HIRIP3Q9BW71 556 aaPredicted RBP18.47■□□□□ 0.55
DNMT1-205ENST00000585920 PIP4K2BP78356 416 aa18.46■□□□□ 0.55
DNMT1-205ENST00000585920 SLAIN2Q9P270 581 aa18.46■□□□□ 0.55
DNMT1-205ENST00000585920 RNF39Q9H2S5 420 aa18.45■□□□□ 0.54
DNMT1-205ENST00000585920 XIRP1Q702N8 1843 aaKnown RBP18.44■□□□□ 0.54
DNMT1-205ENST00000585920 DCCP43146 1447 aa18.44■□□□□ 0.54
DNMT1-205ENST00000585920 ZEB1P37275 1124 aaPredicted RBP18.43■□□□□ 0.54
DNMT1-205ENST00000585920 FBXO41Q8TF61 875 aa18.43■□□□□ 0.54
DNMT1-205ENST00000585920 SPINK5Q9NQ38 1064 aaPredicted RBP18.43■□□□□ 0.54
DNMT1-205ENST00000585920 ST20-MTHFSA0A0A6YYL1 179 aa18.42■□□□□ 0.54
DNMT1-205ENST00000585920 NUTM2FA1L443 756 aa18.42■□□□□ 0.54
DNMT1-205ENST00000585920 WASLO00401 505 aaPredicted RBP18.42■□□□□ 0.54
DNMT1-205ENST00000585920 RTN4Q9NQC3 1192 aaKnown RBP18.42■□□□□ 0.54
DNMT1-205ENST00000585920 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.41■□□□□ 0.54
DNMT1-205ENST00000585920 USP47Q96K76 1375 aa18.41■□□□□ 0.54
DNMT1-205ENST00000585920 ARHGEF28Q8N1W1 1705 aaKnown RBP18.4■□□□□ 0.54
DNMT1-205ENST00000585920 EIF4G2P78344 907 aaKnown RBP eCLIP18.4■□□□□ 0.54
DNMT1-205ENST00000585920 CDK19Q9BWU1 502 aa18.4■□□□□ 0.54
DNMT1-205ENST00000585920 SLC24A1O60721 1099 aa18.39■□□□□ 0.53
DNMT1-205ENST00000585920 NALCNQ8IZF0 1738 aa18.39■□□□□ 0.53
DNMT1-205ENST00000585920 SRPK2P78362 688 aaKnown RBP18.37■□□□□ 0.53
DNMT1-205ENST00000585920 ESCO1Q5FWF5 840 aa18.37■□□□□ 0.53
DNMT1-205ENST00000585920 EVC2Q86UK5 1308 aa18.37■□□□□ 0.53
DNMT1-205ENST00000585920 MST1RQ04912 1400 aa18.37■□□□□ 0.53
DNMT1-205ENST00000585920 CDC42BPGQ6DT37 1551 aa18.36■□□□□ 0.53
DNMT1-205ENST00000585920 C1orf167Q5SNV9 1468 aa18.35■□□□□ 0.53
DNMT1-205ENST00000585920 HSPA5P11021 654 aaKnown RBP18.35■□□□□ 0.53
DNMT1-205ENST00000585920 ORAI2Q96SN7 254 aa18.35■□□□□ 0.53
DNMT1-205ENST00000585920 CABP2Q9NPB3 220 aa18.35■□□□□ 0.53
DNMT1-205ENST00000585920 AMER1Q5JTC6 1135 aaPredicted RBP18.34■□□□□ 0.53
DNMT1-205ENST00000585920 BRINP3Q76B58 766 aa18.34■□□□□ 0.53
DNMT1-205ENST00000585920 NUDT16Q96DE0 195 aaKnown RBP18.34■□□□□ 0.53
DNMT1-205ENST00000585920 TESK2Q96S53 571 aa18.34■□□□□ 0.53
DNMT1-205ENST00000585920 SBNO2Q9Y2G9 1366 aa18.33■□□□□ 0.53
DNMT1-205ENST00000585920 ADGRB2O60241 1585 aa18.33■□□□□ 0.52
DNMT1-205ENST00000585920 TMF1P82094 1093 aa18.32■□□□□ 0.52
DNMT1-205ENST00000585920 QRICH2Q9H0J4 1663 aa18.31■□□□□ 0.52
DNMT1-205ENST00000585920 CCDC61Q9Y6R9 512 aa18.31■□□□□ 0.52
DNMT1-205ENST00000585920 ANKARQ7Z5J8 1434 aa18.31■□□□□ 0.52
DNMT1-205ENST00000585920 PRR36Q9H6K5 1346 aa18.3■□□□□ 0.52
DNMT1-205ENST00000585920 MKRN4PQ13434 485 aaPredicted RBP18.3■□□□□ 0.52
DNMT1-205ENST00000585920 PHF8Q9UPP1 1060 aa18.3■□□□□ 0.52
DNMT1-205ENST00000585920 PMFBP1Q8TBY8 1022 aa18.29■□□□□ 0.52
DNMT1-205ENST00000585920 ILDR1Q86SU0 546 aaPredicted RBP18.28■□□□□ 0.52
DNMT1-205ENST00000585920 FMN2Q9NZ56 1722 aa18.28■□□□□ 0.52
DNMT1-205ENST00000585920 TULP4Q9NRJ4 1543 aa18.28■□□□□ 0.52
DNMT1-205ENST00000585920 FOXO3O43524 673 aa18.27■□□□□ 0.52
DNMT1-205ENST00000585920 CDCA8Q53HL2 280 aa18.27■□□□□ 0.52
DNMT1-205ENST00000585920 PUS7Q96PZ0 661 aaKnown RBP18.27■□□□□ 0.52
DNMT1-205ENST00000585920 CAPN15O75808 1086 aa18.26■□□□□ 0.51
DNMT1-205ENST00000585920 HSPA1LP34931 641 aa18.26■□□□□ 0.51
DNMT1-205ENST00000585920 NGDNQ8NEJ9 315 aaKnown RBP18.26■□□□□ 0.51
DNMT1-205ENST00000585920 PSME1Q06323 249 aa18.25■□□□□ 0.51
DNMT1-205ENST00000585920 DDX17Q92841 729 aaKnown RBP18.25■□□□□ 0.51
DNMT1-205ENST00000585920 CABP1Q9NZU7 370 aa18.25■□□□□ 0.51
DNMT1-205ENST00000585920 ROBO1Q9Y6N7 1651 aa18.25■□□□□ 0.51
DNMT1-205ENST00000585920 PLEKHG3A1L390 1219 aa18.24■□□□□ 0.51
DNMT1-205ENST00000585920 ATAD2Q6PL18 1390 aa18.24■□□□□ 0.51
DNMT1-205ENST00000585920 NPHP3Q7Z494 1330 aa18.23■□□□□ 0.51
DNMT1-205ENST00000585920 ATP7BP35670 1465 aa18.23■□□□□ 0.51
DNMT1-205ENST00000585920 DISP3Q9P2K9 1392 aa18.23■□□□□ 0.51
DNMT1-205ENST00000585920 TMC1Q8TDI8 760 aa18.23■□□□□ 0.51
DNMT1-205ENST00000585920 C1QBPQ07021 282 aaKnown RBP18.22■□□□□ 0.51
DNMT1-205ENST00000585920 POLA2Q14181 598 aa18.22■□□□□ 0.51
DNMT1-205ENST00000585920 KRT28Q7Z3Y7 464 aa18.22■□□□□ 0.51
DNMT1-205ENST00000585920 POLR3GLQ9BT43 218 aa18.22■□□□□ 0.51
DNMT1-205ENST00000585920 PPIP5K1Q6PFW1 1433 aa18.22■□□□□ 0.51
DNMT1-205ENST00000585920 USP32Q8NFA0 1604 aa18.21■□□□□ 0.51
DNMT1-205ENST00000585920 XPCQ01831 940 aaPredicted RBP18.21■□□□□ 0.51
DNMT1-205ENST00000585920 ACEP12821 1306 aa18.21■□□□□ 0.51
DNMT1-205ENST00000585920 LRRC59Q96AG4 307 aaKnown RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms