RNA–Protein interactions for RNA: ENST00000584684.1

ERBB2-220, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 649 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-220ENST00000584684 FMN2Q9NZ56 1722 aa19.25■□□□□ 0.67
ERBB2-220ENST00000584684 CFAP70Q5T0N1 1121 aa19.24■□□□□ 0.67
ERBB2-220ENST00000584684 STK26Q9P289 416 aa19.24■□□□□ 0.67
ERBB2-220ENST00000584684 ADGRB2O60241 1585 aa19.23■□□□□ 0.67
ERBB2-220ENST00000584684 PLEKHH1Q9ULM0 1364 aa19.23■□□□□ 0.67
ERBB2-220ENST00000584684 LRP6O75581 1613 aa19.22■□□□□ 0.67
ERBB2-220ENST00000584684 KIAA1210Q9ULL0 1709 aa19.22■□□□□ 0.67
ERBB2-220ENST00000584684 SOCS7O14512 581 aa19.21■□□□□ 0.67
ERBB2-220ENST00000584684 WAPLQ7Z5K2 1190 aa19.21■□□□□ 0.67
ERBB2-220ENST00000584684 DCAF11Q8TEB1 546 aa19.21■□□□□ 0.67
ERBB2-220ENST00000584684 KIF1AQ12756 1690 aa19.2■□□□□ 0.66
ERBB2-220ENST00000584684 RGS17Q9UGC6 210 aaPredicted RBP19.19■□□□□ 0.66
ERBB2-220ENST00000584684 LRRC59Q96AG4 307 aaKnown RBP19.18■□□□□ 0.66
ERBB2-220ENST00000584684 SOS2Q07890 1332 aaPredicted RBP19.18■□□□□ 0.66
ERBB2-220ENST00000584684 ORAI2Q96SN7 254 aa19.17■□□□□ 0.66
ERBB2-220ENST00000584684 PNPLA6Q8IY17 1366 aa19.17■□□□□ 0.66
ERBB2-220ENST00000584684 ARHGEF28Q8N1W1 1705 aaKnown RBP19.17■□□□□ 0.66
ERBB2-220ENST00000584684 COL22A1Q8NFW1 1626 aaPredicted RBP19.16■□□□□ 0.66
ERBB2-220ENST00000584684 PXDNQ92626 1479 aa19.16■□□□□ 0.66
ERBB2-220ENST00000584684 KDM2AQ9Y2K7 1162 aa19.15■□□□□ 0.66
ERBB2-220ENST00000584684 DDX17Q92841 729 aaKnown RBP19.14■□□□□ 0.65
ERBB2-220ENST00000584684 PRAM1Q96QH2 718 aa19.14■□□□□ 0.65
ERBB2-220ENST00000584684 NPHP3Q7Z494 1330 aa19.14■□□□□ 0.65
ERBB2-220ENST00000584684 ANKARQ7Z5J8 1434 aa19.13■□□□□ 0.65
ERBB2-220ENST00000584684 ESCO1Q5FWF5 840 aa19.12■□□□□ 0.65
ERBB2-220ENST00000584684 USP32Q8NFA0 1604 aa19.11■□□□□ 0.65
ERBB2-220ENST00000584684 RGPD8O14715 1765 aaPredicted RBP19.1■□□□□ 0.65
ERBB2-220ENST00000584684 EIF3AQ14152 1382 aaKnown RBP19.09■□□□□ 0.65
ERBB2-220ENST00000584684 POGKQ9P215 609 aa19.09■□□□□ 0.65
ERBB2-220ENST00000584684 TRAK1Q9UPV9 953 aa19.08■□□□□ 0.64
ERBB2-220ENST00000584684 TULP4Q9NRJ4 1543 aa19.08■□□□□ 0.64
ERBB2-220ENST00000584684 MEX3CQ5U5Q3 659 aaKnown RBP19.07■□□□□ 0.64
ERBB2-220ENST00000584684 POTEAQ6S8J7 498 aa19.07■□□□□ 0.64
ERBB2-220ENST00000584684 FOXO3O43524 673 aa19.05■□□□□ 0.64
ERBB2-220ENST00000584684 SAFB2Q14151 953 aaKnown RBP eCLIP19.05■□□□□ 0.64
ERBB2-220ENST00000584684 NUTM2FA1L443 756 aa19.04■□□□□ 0.64
ERBB2-220ENST00000584684 TRIM26Q12899 539 aaPredicted RBP19.04■□□□□ 0.64
ERBB2-220ENST00000584684 ZNF772Q68DY9 489 aaPredicted RBP19.04■□□□□ 0.64
ERBB2-220ENST00000584684 TRPM1Q7Z4N2 1603 aa19.03■□□□□ 0.64
ERBB2-220ENST00000584684 ITSN1Q15811 1721 aa19.03■□□□□ 0.64
ERBB2-220ENST00000584684 NUTM2BA6NNL0 878 aaPredicted RBP19.03■□□□□ 0.64
ERBB2-220ENST00000584684 NUTM2EB1AL46 878 aaPredicted RBP19.03■□□□□ 0.64
ERBB2-220ENST00000584684 NUTM2AQ8IVF1 878 aaPredicted RBP19.03■□□□□ 0.64
ERBB2-220ENST00000584684 MARF1Q9Y4F3 1742 aaKnown RBP19.03■□□□□ 0.64
ERBB2-220ENST00000584684 PHF8Q9UPP1 1060 aa19.02■□□□□ 0.64
ERBB2-220ENST00000584684 L3MBTL2Q969R5 705 aa19.01■□□□□ 0.63
ERBB2-220ENST00000584684 ATP7BP35670 1465 aa19.01■□□□□ 0.63
ERBB2-220ENST00000584684 MINK1Q8N4C8 1332 aaPredicted RBP19■□□□□ 0.63
ERBB2-220ENST00000584684 TNS3Q68CZ2 1445 aa19■□□□□ 0.63
ERBB2-220ENST00000584684 WASLO00401 505 aaPredicted RBP19■□□□□ 0.63
ERBB2-220ENST00000584684 TOPAZ1Q8N9V7 1692 aa19■□□□□ 0.63
ERBB2-220ENST00000584684 TRPM3Q9HCF6 1732 aaPredicted RBP19■□□□□ 0.63
ERBB2-220ENST00000584684 SPATA31A3Q5VYP0 1347 aa19■□□□□ 0.63
ERBB2-220ENST00000584684 SBNO1A3KN83 1393 aa18.99■□□□□ 0.63
ERBB2-220ENST00000584684 AFF2P51816 1311 aa18.99■□□□□ 0.63
ERBB2-220ENST00000584684 CDK12Q9NYV4 1490 aaPredicted RBP18.98■□□□□ 0.63
ERBB2-220ENST00000584684 XPCQ01831 940 aaPredicted RBP18.98■□□□□ 0.63
ERBB2-220ENST00000584684 SIN3AQ96ST3 1273 aa18.98■□□□□ 0.63
ERBB2-220ENST00000584684 HIRIP3Q9BW71 556 aaPredicted RBP18.98■□□□□ 0.63
ERBB2-220ENST00000584684 PRR36Q9H6K5 1346 aa18.98■□□□□ 0.63
ERBB2-220ENST00000584684 ABCA3Q99758 1704 aa18.97■□□□□ 0.63
ERBB2-220ENST00000584684 NBPF1Q3BBV0 1214 aa18.97■□□□□ 0.63
ERBB2-220ENST00000584684 QRICH2Q9H0J4 1663 aa18.97■□□□□ 0.63
ERBB2-220ENST00000584684 KRT28Q7Z3Y7 464 aa18.96■□□□□ 0.63
ERBB2-220ENST00000584684 ALS2Q96Q42 1657 aa18.95■□□□□ 0.62
ERBB2-220ENST00000584684 PSME1Q06323 249 aa18.95■□□□□ 0.62
ERBB2-220ENST00000584684 C8orf37Q96NL8 207 aa18.95■□□□□ 0.62
ERBB2-220ENST00000584684 ARHGEF10O15013 1369 aa18.94■□□□□ 0.62
ERBB2-220ENST00000584684 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.94■□□□□ 0.62
ERBB2-220ENST00000584684 ADAMTS2O95450 1211 aa18.93■□□□□ 0.62
ERBB2-220ENST00000584684 GPRASP1Q5JY77 1395 aa18.93■□□□□ 0.62
ERBB2-220ENST00000584684 NEUROD1Q13562 356 aa18.92■□□□□ 0.62
ERBB2-220ENST00000584684 FNBP4Q8N3X1 1017 aaPredicted RBP18.92■□□□□ 0.62
ERBB2-220ENST00000584684 CENPJQ9HC77 1338 aaPredicted RBP18.92■□□□□ 0.62
ERBB2-220ENST00000584684 NGLY1Q96IV0 654 aa18.91■□□□□ 0.62
ERBB2-220ENST00000584684 PMFBP1Q8TBY8 1022 aa18.9■□□□□ 0.62
ERBB2-220ENST00000584684 CRYBG1Q9Y4K1 1723 aa18.9■□□□□ 0.62
ERBB2-220ENST00000584684 ROCK2O75116 1388 aaKnown RBP18.9■□□□□ 0.62
ERBB2-220ENST00000584684 RXRBP28702 533 aa18.89■□□□□ 0.61
ERBB2-220ENST00000584684 NUDT16Q96DE0 195 aaKnown RBP18.89■□□□□ 0.61
ERBB2-220ENST00000584684 POLR3AO14802 1390 aaPredicted RBP18.89■□□□□ 0.61
ERBB2-220ENST00000584684 ATRNO75882 1429 aa18.89■□□□□ 0.61
ERBB2-220ENST00000584684 CDK19Q9BWU1 502 aa18.88■□□□□ 0.61
ERBB2-220ENST00000584684 RALGAPBQ86X10 1494 aa18.88■□□□□ 0.61
ERBB2-220ENST00000584684 SLIT2O94813 1529 aa18.88■□□□□ 0.61
ERBB2-220ENST00000584684 BCL9LQ86UU0 1499 aa18.87■□□□□ 0.61
ERBB2-220ENST00000584684 TONSLQ96HA7 1378 aa18.87■□□□□ 0.61
ERBB2-220ENST00000584684 NWD2Q9ULI1 1742 aa18.87■□□□□ 0.61
ERBB2-220ENST00000584684 PLCH1Q4KWH8 1693 aa18.86■□□□□ 0.61
ERBB2-220ENST00000584684 RGS12O14924 1447 aa18.86■□□□□ 0.61
ERBB2-220ENST00000584684 RBM6P78332 1123 aaKnown RBP18.86■□□□□ 0.61
ERBB2-220ENST00000584684 USP21Q9UK80 565 aa18.86■□□□□ 0.61
ERBB2-220ENST00000584684 QTRT2Q9H974 415 aaKnown RBP18.85■□□□□ 0.61
ERBB2-220ENST00000584684 CCDC61Q9Y6R9 512 aa18.85■□□□□ 0.61
ERBB2-220ENST00000584684 NGDNQ8NEJ9 315 aaKnown RBP18.84■□□□□ 0.61
ERBB2-220ENST00000584684 TRPC5Q9UL62 973 aaPredicted RBP18.84■□□□□ 0.61
ERBB2-220ENST00000584684 SBNO2Q9Y2G9 1366 aa18.83■□□□□ 0.61
ERBB2-220ENST00000584684 PLEKHG3A1L390 1219 aa18.83■□□□□ 0.6
ERBB2-220ENST00000584684 NBPF8Q3BBV2 869 aa18.83■□□□□ 0.6
ERBB2-220ENST00000584684 PPIP5K1Q6PFW1 1433 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms