RNA–Protein interactions for RNA: ENST00000584337.5

CDH8-211, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-211ENST00000584337 PIBF1Q8WXW3 757 aa12.54□□□□□ -0.4
CDH8-211ENST00000584337 CFAP44Q96MT7 982 aa12.54□□□□□ -0.4
CDH8-211ENST00000584337 ITPRIPQ8IWB1 547 aa12.53□□□□□ -0.4
CDH8-211ENST00000584337 KRT222Q8N1A0 295 aa12.53□□□□□ -0.4
CDH8-211ENST00000584337 NGEFQ8N5V2 710 aa12.53□□□□□ -0.4
CDH8-211ENST00000584337 ST18O60284 1047 aa12.53□□□□□ -0.4
CDH8-211ENST00000584337 PDLIM2Q96JY6 352 aa12.53□□□□□ -0.4
CDH8-211ENST00000584337 SECISBP2LQ93073 1101 aaKnown RBP12.53□□□□□ -0.4
CDH8-211ENST00000584337 CASC1Q6TDU7 716 aa12.52□□□□□ -0.41
CDH8-211ENST00000584337 FAM184AQ8NB25 1140 aa12.52□□□□□ -0.41
CDH8-211ENST00000584337 CLGNO14967 610 aa12.52□□□□□ -0.41
CDH8-211ENST00000584337 CUX1P39880 1505 aa12.51□□□□□ -0.41
CDH8-211ENST00000584337 NKTRP30414 1462 aaKnown RBP12.51□□□□□ -0.41
CDH8-211ENST00000584337 PARD3Q8TEW0 1356 aa12.51□□□□□ -0.41
CDH8-211ENST00000584337 ZNF592Q92610 1267 aa12.51□□□□□ -0.41
CDH8-211ENST00000584337 CCDC112Q8NEF3 446 aa12.51□□□□□ -0.41
CDH8-211ENST00000584337 TTC12Q9H892 705 aaPredicted RBP12.51□□□□□ -0.41
CDH8-211ENST00000584337 CWC22Q9HCG8 908 aaKnown RBP12.51□□□□□ -0.41
CDH8-211ENST00000584337 U2SURPO15042 1029 aaKnown RBP12.5□□□□□ -0.41
CDH8-211ENST00000584337 GTF2A1P52655 376 aaPredicted RBP12.5□□□□□ -0.41
CDH8-211ENST00000584337 GPS2Q13227 327 aa12.5□□□□□ -0.41
CDH8-211ENST00000584337 JARID2Q92833 1246 aaPredicted RBP12.5□□□□□ -0.41
CDH8-211ENST00000584337 PCDHB15Q9Y5E8 787 aa12.5□□□□□ -0.41
CDH8-211ENST00000584337 CASKIN1Q8WXD9 1431 aa12.5□□□□□ -0.41
CDH8-211ENST00000584337 ZKSCAN2Q63HK3 967 aa12.5□□□□□ -0.41
CDH8-211ENST00000584337 DHX37Q8IY37 1157 aaKnown RBP12.5□□□□□ -0.41
CDH8-211ENST00000584337 IFT57Q9NWB7 429 aa12.5□□□□□ -0.41
CDH8-211ENST00000584337 CDCA8Q53HL2 280 aa12.5□□□□□ -0.41
CDH8-211ENST00000584337 LNPKQ9C0E8 428 aa12.5□□□□□ -0.41
CDH8-211ENST00000584337 KDM5BQ9UGL1 1544 aa12.49□□□□□ -0.41
CDH8-211ENST00000584337 RIOK3O14730 519 aaKnown RBP12.49□□□□□ -0.41
CDH8-211ENST00000584337 HDAC5Q9UQL6 1122 aa12.49□□□□□ -0.41
CDH8-211ENST00000584337 FYCO1Q9BQS8 1478 aa12.49□□□□□ -0.41
CDH8-211ENST00000584337 USP25Q9UHP3 1055 aa12.49□□□□□ -0.41
CDH8-211ENST00000584337 RABEP1Q15276 862 aa12.48□□□□□ -0.41
CDH8-211ENST00000584337 DZIP1LQ8IYY4 767 aaKnown RBP12.48□□□□□ -0.41
CDH8-211ENST00000584337 CWC15Q9P013 229 aaKnown RBP12.48□□□□□ -0.41
CDH8-211ENST00000584337 TOP2BQ02880 1626 aa12.48□□□□□ -0.41
CDH8-211ENST00000584337 VGFO15240 615 aaPredicted RBP12.48□□□□□ -0.41
CDH8-211ENST00000584337 ZMYM3Q14202 1370 aa12.48□□□□□ -0.41
CDH8-211ENST00000584337 ZNF710Q8N1W2 664 aa12.48□□□□□ -0.41
CDH8-211ENST00000584337 INSRP06213 1382 aa12.48□□□□□ -0.41
CDH8-211ENST00000584337 PPP2R1AP30153 589 aa12.47□□□□□ -0.41
CDH8-211ENST00000584337 NOM1Q5C9Z4 860 aaKnown RBP12.47□□□□□ -0.41
CDH8-211ENST00000584337 ZNF692Q9BU19 519 aaPredicted RBP12.47□□□□□ -0.41
CDH8-211ENST00000584337 PLEKHH1Q9ULM0 1364 aa12.47□□□□□ -0.41
CDH8-211ENST00000584337 GAS2L2Q8NHY3 880 aa12.47□□□□□ -0.41
CDH8-211ENST00000584337 IGF1RP08069 1367 aa12.46□□□□□ -0.41
CDH8-211ENST00000584337 PATL2C9JE40 543 aaKnown RBP12.46□□□□□ -0.41
CDH8-211ENST00000584337 ADCY5O95622 1261 aa12.46□□□□□ -0.41
CDH8-211ENST00000584337 UVSSAQ2YD98 709 aa12.46□□□□□ -0.41
CDH8-211ENST00000584337 FOXD4L6Q3SYB3 417 aaPredicted RBP12.46□□□□□ -0.41
CDH8-211ENST00000584337 FOXD4L3Q6VB84 417 aaPredicted RBP12.46□□□□□ -0.41
CDH8-211ENST00000584337 C17orf53Q8N3J3 647 aaPredicted RBP12.46□□□□□ -0.41
CDH8-211ENST00000584337 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.46□□□□□ -0.41
CDH8-211ENST00000584337 GTF2F1P35269 517 aaKnown RBP eCLIP12.46□□□□□ -0.42
CDH8-211ENST00000584337 SMC4Q9NTJ3 1288 aa12.46□□□□□ -0.42
CDH8-211ENST00000584337 DDX19BQ9UMR2 479 aa12.46□□□□□ -0.42
CDH8-211ENST00000584337 ZMYM4Q5VZL5 1548 aa12.46□□□□□ -0.42
CDH8-211ENST00000584337 BLMP54132 1417 aaPredicted RBP12.46□□□□□ -0.42
CDH8-211ENST00000584337 SPC24Q8NBT2 197 aa12.45□□□□□ -0.42
CDH8-211ENST00000584337 RGS22Q8NE09 1264 aa12.45□□□□□ -0.42
CDH8-211ENST00000584337 AXDND1Q5T1B0 1012 aaPredicted RBP12.45□□□□□ -0.42
CDH8-211ENST00000584337 ANKRD45Q5TZF3 282 aa12.45□□□□□ -0.42
CDH8-211ENST00000584337 CTR9Q6PD62 1173 aa12.45□□□□□ -0.42
CDH8-211ENST00000584337 LMBRD1Q9NUN5 540 aa12.45□□□□□ -0.42
CDH8-211ENST00000584337 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.45□□□□□ -0.42
CDH8-211ENST00000584337 NOL10Q9BSC4 688 aaKnown RBP12.45□□□□□ -0.42
CDH8-211ENST00000584337 ABCA5Q8WWZ7 1642 aa12.45□□□□□ -0.42
CDH8-211ENST00000584337 ATAD2BQ9ULI0 1458 aa12.45□□□□□ -0.42
CDH8-211ENST00000584337 RASSF4Q9H2L5 321 aa12.44□□□□□ -0.42
CDH8-211ENST00000584337 MVPQ14764 893 aaKnown RBP12.44□□□□□ -0.42
CDH8-211ENST00000584337 SLC20A2Q08357 652 aa12.44□□□□□ -0.42
CDH8-211ENST00000584337 TPD52L1Q16890 204 aaPredicted RBP12.44□□□□□ -0.42
CDH8-211ENST00000584337 CREBRFQ8IUR6 639 aa12.44□□□□□ -0.42
CDH8-211ENST00000584337 PCF11O94913 1555 aaKnown RBP12.44□□□□□ -0.42
CDH8-211ENST00000584337 FKBP5Q13451 457 aaPredicted RBP12.43□□□□□ -0.42
CDH8-211ENST00000584337 SCAPERQ9BY12 1400 aa12.43□□□□□ -0.42
CDH8-211ENST00000584337 EFCC1Q9HA90 598 aa12.43□□□□□ -0.42
CDH8-211ENST00000584337 IPO8O15397 1037 aaKnown RBP12.43□□□□□ -0.42
CDH8-211ENST00000584337 TERF2Q15554 542 aa12.43□□□□□ -0.42
CDH8-211ENST00000584337 GPATCH11Q8N954 259 aa12.43□□□□□ -0.42
CDH8-211ENST00000584337 DEF6Q9H4E7 631 aa12.43□□□□□ -0.42
CDH8-211ENST00000584337 RSPH14Q9UHP6 348 aa12.43□□□□□ -0.42
CDH8-211ENST00000584337 PRDM2Q13029 1718 aa12.42□□□□□ -0.42
CDH8-211ENST00000584337 RRP7AQ9Y3A4 280 aaKnown RBP12.42□□□□□ -0.42
CDH8-211ENST00000584337 LMOD3Q0VAK6 560 aa12.42□□□□□ -0.42
CDH8-211ENST00000584337 ZBTB9Q96C00 473 aa12.42□□□□□ -0.42
CDH8-211ENST00000584337 CDC45O75419 566 aa12.42□□□□□ -0.42
CDH8-211ENST00000584337 RBM42Q9BTD8 480 aaKnown RBP12.41□□□□□ -0.42
CDH8-211ENST00000584337 CFTRP13569 1480 aa12.41□□□□□ -0.42
CDH8-211ENST00000584337 ERCC6Q03468 1493 aa12.41□□□□□ -0.42
CDH8-211ENST00000584337 TNNT1P13805 278 aa12.41□□□□□ -0.42
CDH8-211ENST00000584337 RARSP54136 660 aaKnown RBP12.41□□□□□ -0.42
CDH8-211ENST00000584337 TPM4P67936 248 aa12.41□□□□□ -0.42
CDH8-211ENST00000584337 C16orf45Q96MC5 204 aaPredicted RBP12.41□□□□□ -0.42
CDH8-211ENST00000584337 HMGXB3Q12766 1538 aa12.41□□□□□ -0.42
CDH8-211ENST00000584337 TEX14Q8IWB6 1497 aa12.4□□□□□ -0.42
CDH8-211ENST00000584337 TMEM63CQ9P1W3 806 aa12.4□□□□□ -0.42
CDH8-211ENST00000584337 ZNF397Q8NF99 534 aaPredicted RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms