RNA–Protein interactions for RNA: ENST00000583226.1

NCOR1-223, Transcript of nuclear receptor corepressor 1, human

TSL 5

Gene NCOR1, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCOR1-223	ENST00000583226	STAC3	Q96MF2	364 aa		13.2	□□□□□ -0.3
NCOR1-223	ENST00000583226	NCOA1	Q15788	1441 aa		13.19	□□□□□ -0.3
NCOR1-223	ENST00000583226	UBAP1L	F5GYI3	381 aa		13.18	□□□□□ -0.3
NCOR1-223	ENST00000583226	TK2	O00142	265 aa		13.18	□□□□□ -0.3
NCOR1-223	ENST00000583226	COL9A1	P20849	921 aa		13.18	□□□□□ -0.3
NCOR1-223	ENST00000583226	C6orf132	Q5T0Z8	1188 aa		13.18	□□□□□ -0.3
NCOR1-223	ENST00000583226	RNF166	Q96A37	237 aa	Predicted RBP	13.18	□□□□□ -0.3
NCOR1-223	ENST00000583226	PLCH2	O75038	1416 aa		13.17	□□□□□ -0.3
NCOR1-223	ENST00000583226	PPP1R3G	B7ZBB8	358 aa		13.17	□□□□□ -0.3
NCOR1-223	ENST00000583226	EN1	Q05925	392 aa	Predicted RBP	13.17	□□□□□ -0.3
NCOR1-223	ENST00000583226	VPS9D1	Q9Y2B5	631 aa		13.17	□□□□□ -0.3
NCOR1-223	ENST00000583226	TRAPPC8	Q9Y2L5	1435 aa		13.16	□□□□□ -0.3
NCOR1-223	ENST00000583226	TSR1	Q2NL82	804 aa	Known RBP	13.16	□□□□□ -0.3
NCOR1-223	ENST00000583226	VSIG10	Q8N0Z9	540 aa		13.16	□□□□□ -0.3
NCOR1-223	ENST00000583226	ZBED2	Q9BTP6	218 aa		13.16	□□□□□ -0.3
NCOR1-223	ENST00000583226	MLLT3	P42568	568 aa	Predicted RBP	13.15	□□□□□ -0.3
NCOR1-223	ENST00000583226	C3	P01024	1663 aa		13.13	□□□□□ -0.31
NCOR1-223	ENST00000583226	PRIM1	P49642	420 aa	Known RBP	13.13	□□□□□ -0.31
NCOR1-223	ENST00000583226	PROX2	Q3B8N5	592 aa		13.13	□□□□□ -0.31
NCOR1-223	ENST00000583226	ZNF518A	Q6AHZ1	1483 aa		13.12	□□□□□ -0.31
NCOR1-223	ENST00000583226	OSBP	P22059	807 aa		13.12	□□□□□ -0.31
NCOR1-223	ENST00000583226	EFCAB2	Q5VUJ9	269 aa		13.12	□□□□□ -0.31
NCOR1-223	ENST00000583226	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	13.12	□□□□□ -0.31
NCOR1-223	ENST00000583226	MED1	Q15648	1581 aa	Predicted RBP	13.11	□□□□□ -0.31
NCOR1-223	ENST00000583226	RERE	Q9P2R6	1566 aa		13.11	□□□□□ -0.31
NCOR1-223	ENST00000583226	HR	O43593	1189 aa		13.11	□□□□□ -0.31
NCOR1-223	ENST00000583226	SEMA3E	O15041	775 aa		13.1	□□□□□ -0.31
NCOR1-223	ENST00000583226	SLC4A5	Q9BY07	1137 aa		13.1	□□□□□ -0.31
NCOR1-223	ENST00000583226	ESF1	Q9H501	851 aa	Known RBP	13.1	□□□□□ -0.31
NCOR1-223	ENST00000583226	KDM5C	P41229	1560 aa		13.09	□□□□□ -0.31
NCOR1-223	ENST00000583226	CAMSAP1	Q5T5Y3	1602 aa		13.09	□□□□□ -0.31
NCOR1-223	ENST00000583226	AGL	P35573	1532 aa		13.08	□□□□□ -0.31
NCOR1-223	ENST00000583226	HSPA1L	P34931	641 aa		13.08	□□□□□ -0.32
NCOR1-223	ENST00000583226	NPAT	Q14207	1427 aa		13.07	□□□□□ -0.32
NCOR1-223	ENST00000583226	CNTLN	Q9NXG0	1405 aa		13.07	□□□□□ -0.32
NCOR1-223	ENST00000583226	AFAP1	Q8N556	730 aa		13.07	□□□□□ -0.32
NCOR1-223	ENST00000583226	CDHR5	Q9HBB8	845 aa		13.07	□□□□□ -0.32
NCOR1-223	ENST00000583226	DIP2C	Q9Y2E4	1556 aa		13.07	□□□□□ -0.32
NCOR1-223	ENST00000583226	MRPL50	Q8N5N7	158 aa	Known RBP	13.06	□□□□□ -0.32
NCOR1-223	ENST00000583226	GOLGA8CP	A6NN73	597 aa		13.05	□□□□□ -0.32
NCOR1-223	ENST00000583226	MLH3	Q9UHC1	1453 aa		13.04	□□□□□ -0.32
NCOR1-223	ENST00000583226	KCTD12	Q96CX2	325 aa	Known RBP	13.04	□□□□□ -0.32
NCOR1-223	ENST00000583226	NBPF3	Q9H094	633 aa		13.04	□□□□□ -0.32
NCOR1-223	ENST00000583226	KIAA1468	Q9P260	1216 aa		13.04	□□□□□ -0.32
NCOR1-223	ENST00000583226	MYO5C	Q9NQX4	1742 aa		13.04	□□□□□ -0.32
NCOR1-223	ENST00000583226	PLA2R1	Q13018	1463 aa		13.04	□□□□□ -0.32
NCOR1-223	ENST00000583226	CDK13	Q14004	1512 aa	Known RBP	13.03	□□□□□ -0.32
NCOR1-223	ENST00000583226	TOM1	O60784	492 aa		13.02	□□□□□ -0.33
NCOR1-223	ENST00000583226	RABGEF1	Q9UJ41	708 aa		13.02	□□□□□ -0.33
NCOR1-223	ENST00000583226	TCOF1	Q13428	1488 aa	Known RBP	13.02	□□□□□ -0.33
NCOR1-223	ENST00000583226	ABCA6	Q8N139	1617 aa		13.02	□□□□□ -0.33
NCOR1-223	ENST00000583226	TRIM6-TRIM34	B2RNG4	842 aa		13.01	□□□□□ -0.33
NCOR1-223	ENST00000583226	BHMG1	C9JSJ3	638 aa	Predicted RBP	13.01	□□□□□ -0.33
NCOR1-223	ENST00000583226	RANGAP1	P46060	587 aa	Predicted RBP	13	□□□□□ -0.33
NCOR1-223	ENST00000583226	PIP4K2B	P78356	416 aa		13	□□□□□ -0.33
NCOR1-223	ENST00000583226	MROH2A	A6NES4	1674 aa		12.99	□□□□□ -0.33
NCOR1-223	ENST00000583226	ZMYM3	Q14202	1370 aa		12.99	□□□□□ -0.33
NCOR1-223	ENST00000583226	CDCA7L	Q96GN5	454 aa		12.99	□□□□□ -0.33
NCOR1-223	ENST00000583226	ARHGAP5	Q13017	1502 aa		12.98	□□□□□ -0.33
NCOR1-223	ENST00000583226	NUTM2F	A1L443	756 aa		12.98	□□□□□ -0.33
NCOR1-223	ENST00000583226	SEPT9	Q9UHD8	586 aa	Predicted RBP	12.98	□□□□□ -0.33
NCOR1-223	ENST00000583226	CDK11A	Q9UQ88	783 aa	Predicted RBP	12.98	□□□□□ -0.33
NCOR1-223	ENST00000583226	ZNF142	P52746	1687 aa	Predicted RBP	12.98	□□□□□ -0.33
NCOR1-223	ENST00000583226	PRSS12	P56730	875 aa		12.97	□□□□□ -0.33
NCOR1-223	ENST00000583226	TSKS	Q9UJT2	592 aa		12.97	□□□□□ -0.33
NCOR1-223	ENST00000583226	PACS2	Q86VP3	889 aa		12.96	□□□□□ -0.33
NCOR1-223	ENST00000583226	WNT2B	Q93097	391 aa		12.96	□□□□□ -0.33
NCOR1-223	ENST00000583226	CPS1	P31327	1500 aa		12.96	□□□□□ -0.33
NCOR1-223	ENST00000583226	TESPA1	A2RU30	521 aa	Predicted RBP	12.95	□□□□□ -0.34
NCOR1-223	ENST00000583226	KIF14	Q15058	1648 aa		12.95	□□□□□ -0.34
NCOR1-223	ENST00000583226	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	12.94	□□□□□ -0.34
NCOR1-223	ENST00000583226	ONECUT3	O60422	494 aa	Predicted RBP	12.94	□□□□□ -0.34
NCOR1-223	ENST00000583226	SMYD5	Q6GMV2	418 aa		12.94	□□□□□ -0.34
NCOR1-223	ENST00000583226	MYO3A	Q8NEV4	1616 aa		12.94	□□□□□ -0.34
NCOR1-223	ENST00000583226	PTPN5	P54829	565 aa		12.93	□□□□□ -0.34
NCOR1-223	ENST00000583226	TRO	Q12816	1431 aa	Predicted RBP	12.93	□□□□□ -0.34
NCOR1-223	ENST00000583226	KIDINS220	Q9ULH0	1771 aa		12.92	□□□□□ -0.34
NCOR1-223	ENST00000583226	SMAP	O00193	183 aa		12.92	□□□□□ -0.34
NCOR1-223	ENST00000583226	PTPRK	Q15262	1439 aa		12.92	□□□□□ -0.34
NCOR1-223	ENST00000583226	RBM26	Q5T8P6	1007 aa	Known RBP	12.92	□□□□□ -0.34
NCOR1-223	ENST00000583226	NPDC1	Q9NQX5	325 aa	Predicted RBP	12.92	□□□□□ -0.34
NCOR1-223	ENST00000583226	SHANK2	Q9UPX8	1470 aa		12.91	□□□□□ -0.34
NCOR1-223	ENST00000583226	SUPT6H	Q7KZ85	1726 aa	Known RBP	12.91	□□□□□ -0.34
NCOR1-223	ENST00000583226	PADI6	Q6TGC4	694 aa		12.91	□□□□□ -0.34
NCOR1-223	ENST00000583226	HCST	Q9UBK5	93 aa		12.91	□□□□□ -0.34
NCOR1-223	ENST00000583226	FAM198A	Q9UFP1	575 aa		12.91	□□□□□ -0.34
NCOR1-223	ENST00000583226	ABCC1	P33527	1531 aa		12.91	□□□□□ -0.34
NCOR1-223	ENST00000583226	CLIP1	P30622	1438 aa		12.9	□□□□□ -0.34
NCOR1-223	ENST00000583226	CDC42BPB	Q9Y5S2	1711 aa		12.9	□□□□□ -0.34
NCOR1-223	ENST00000583226	LAPTM4B	Q86VI4	370 aa		12.89	□□□□□ -0.35
NCOR1-223	ENST00000583226	ANKK1	Q8NFD2	765 aa		12.89	□□□□□ -0.35
NCOR1-223	ENST00000583226	PNMA3	Q9UL41	463 aa		12.89	□□□□□ -0.35
NCOR1-223	ENST00000583226	FMN1	Q68DA7	1419 aa		12.88	□□□□□ -0.35
NCOR1-223	ENST00000583226	ALK	Q9UM73	1620 aa		12.88	□□□□□ -0.35
NCOR1-223	ENST00000583226	ZFR	Q96KR1	1074 aa	Known RBP	12.88	□□□□□ -0.35
NCOR1-223	ENST00000583226	RGS17	Q9UGC6	210 aa	Predicted RBP	12.88	□□□□□ -0.35
NCOR1-223	ENST00000583226	ATP1B4	Q9UN42	357 aa	Predicted RBP	12.88	□□□□□ -0.35
NCOR1-223	ENST00000583226	A2ML1	A8K2U0	1454 aa		12.88	□□□□□ -0.35
NCOR1-223	ENST00000583226	ITSN2	Q9NZM3	1697 aa		12.88	□□□□□ -0.35
NCOR1-223	ENST00000583226	NBPF26	B4DH59	902 aa		12.87	□□□□□ -0.35

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