RNA–Protein interactions for RNA: ENST00000583211.5

LIMD2-211, Transcript of LIM domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMD2, Length 1,298 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-211ENST00000583211 WAPLQ7Z5K2 1190 aa26.11■■□□□ 1.77
LIMD2-211ENST00000583211 SLAIN2Q9P270 581 aa26.11■■□□□ 1.77
LIMD2-211ENST00000583211 TIMELESSQ9UNS1 1208 aa26.09■■□□□ 1.77
LIMD2-211ENST00000583211 TRAK1Q9UPV9 953 aa26.09■■□□□ 1.77
LIMD2-211ENST00000583211 NBPF1Q3BBV0 1214 aa26.08■■□□□ 1.77
LIMD2-211ENST00000583211 MST1RQ04912 1400 aa26.07■■□□□ 1.76
LIMD2-211ENST00000583211 PRAM1Q96QH2 718 aa26.07■■□□□ 1.76
LIMD2-211ENST00000583211 ADGRB2O60241 1585 aa26.07■■□□□ 1.76
LIMD2-211ENST00000583211 FMN2Q9NZ56 1722 aa26.05■■□□□ 1.76
LIMD2-211ENST00000583211 NBPF8Q3BBV2 869 aa26.05■■□□□ 1.76
LIMD2-211ENST00000583211 POGKQ9P215 609 aa26.05■■□□□ 1.76
LIMD2-211ENST00000583211 RALGAPBQ86X10 1494 aa26.04■■□□□ 1.76
LIMD2-211ENST00000583211 ROCK2O75116 1388 aaKnown RBP26.04■■□□□ 1.76
LIMD2-211ENST00000583211 GPRASP1Q5JY77 1395 aa26.02■■□□□ 1.76
LIMD2-211ENST00000583211 C1orf167Q5SNV9 1468 aa25.99■■□□□ 1.75
LIMD2-211ENST00000583211 QRICH2Q9H0J4 1663 aa25.99■■□□□ 1.75
LIMD2-211ENST00000583211 PHLPP1O60346 1717 aa25.98■■□□□ 1.75
LIMD2-211ENST00000583211 SAFB2Q14151 953 aaKnown RBP eCLIP25.98■■□□□ 1.75
LIMD2-211ENST00000583211 RGPD8O14715 1765 aaPredicted RBP25.97■■□□□ 1.75
LIMD2-211ENST00000583211 NHSL1Q5SYE7 1610 aa25.97■■□□□ 1.75
LIMD2-211ENST00000583211 AHDC1Q5TGY3 1603 aaPredicted RBP25.96■■□□□ 1.75
LIMD2-211ENST00000583211 HSPA1LP34931 641 aa25.96■■□□□ 1.75
LIMD2-211ENST00000583211 BRINP3Q76B58 766 aa25.94■■□□□ 1.74
LIMD2-211ENST00000583211 EIF3AQ14152 1382 aaKnown RBP25.94■■□□□ 1.74
LIMD2-211ENST00000583211 KIF1AQ12756 1690 aa25.92■■□□□ 1.74
LIMD2-211ENST00000583211 MINK1Q8N4C8 1332 aaPredicted RBP25.91■■□□□ 1.74
LIMD2-211ENST00000583211 CENPJQ9HC77 1338 aaPredicted RBP25.91■■□□□ 1.74
LIMD2-211ENST00000583211 COL16A1Q07092 1604 aaPredicted RBP25.91■■□□□ 1.74
LIMD2-211ENST00000583211 USP32Q8NFA0 1604 aa25.91■■□□□ 1.74
LIMD2-211ENST00000583211 CARD11Q9BXL7 1154 aa25.9■■□□□ 1.74
LIMD2-211ENST00000583211 ITSN1Q15811 1721 aa25.9■■□□□ 1.74
LIMD2-211ENST00000583211 ANKARQ7Z5J8 1434 aa25.89■■□□□ 1.74
LIMD2-211ENST00000583211 TULP4Q9NRJ4 1543 aa25.89■■□□□ 1.74
LIMD2-211ENST00000583211 HIRIP3Q9BW71 556 aaPredicted RBP25.89■■□□□ 1.74
LIMD2-211ENST00000583211 WASLO00401 505 aaPredicted RBP25.87■■□□□ 1.73
LIMD2-211ENST00000583211 ORAI2Q96SN7 254 aa25.85■■□□□ 1.73
LIMD2-211ENST00000583211 NUTM2FA1L443 756 aa25.84■■□□□ 1.73
LIMD2-211ENST00000583211 ESCO1Q5FWF5 840 aa25.84■■□□□ 1.73
LIMD2-211ENST00000583211 SBNO2Q9Y2G9 1366 aa25.82■■□□□ 1.72
LIMD2-211ENST00000583211 TOPAZ1Q8N9V7 1692 aa25.81■■□□□ 1.72
LIMD2-211ENST00000583211 SHPRHQ149N8 1683 aa25.8■■□□□ 1.72
LIMD2-211ENST00000583211 ATP7BP35670 1465 aa25.79■■□□□ 1.72
LIMD2-211ENST00000583211 CDK19Q9BWU1 502 aa25.79■■□□□ 1.72
LIMD2-211ENST00000583211 NPHP3Q7Z494 1330 aa25.78■■□□□ 1.72
LIMD2-211ENST00000583211 PRR36Q9H6K5 1346 aa25.77■■□□□ 1.72
LIMD2-211ENST00000583211 PHF8Q9UPP1 1060 aa25.76■■□□□ 1.71
LIMD2-211ENST00000583211 SOS2Q07890 1332 aaPredicted RBP25.76■■□□□ 1.71
LIMD2-211ENST00000583211 PXDNQ92626 1479 aa25.75■■□□□ 1.71
LIMD2-211ENST00000583211 JCADQ9P266 1359 aa25.75■■□□□ 1.71
LIMD2-211ENST00000583211 EVC2Q86UK5 1308 aa25.74■■□□□ 1.71
LIMD2-211ENST00000583211 DDX17Q92841 729 aaKnown RBP25.74■■□□□ 1.71
LIMD2-211ENST00000583211 LRRC59Q96AG4 307 aaKnown RBP25.73■■□□□ 1.71
LIMD2-211ENST00000583211 NUDT16Q96DE0 195 aaKnown RBP25.73■■□□□ 1.71
LIMD2-211ENST00000583211 USP47Q96K76 1375 aa25.72■■□□□ 1.71
LIMD2-211ENST00000583211 FOXO3O43524 673 aa25.72■■□□□ 1.71
LIMD2-211ENST00000583211 SRPK2P78362 688 aaKnown RBP25.71■■□□□ 1.71
LIMD2-211ENST00000583211 CCDC61Q9Y6R9 512 aa25.7■■□□□ 1.7
LIMD2-211ENST00000583211 SLC24A1O60721 1099 aa25.69■■□□□ 1.7
LIMD2-211ENST00000583211 ST20-MTHFSA0A0A6YYL1 179 aa25.68■■□□□ 1.7
LIMD2-211ENST00000583211 MED1Q15648 1581 aaPredicted RBP25.68■■□□□ 1.7
LIMD2-211ENST00000583211 COL22A1Q8NFW1 1626 aaPredicted RBP25.67■■□□□ 1.7
LIMD2-211ENST00000583211 PMFBP1Q8TBY8 1022 aa25.67■■□□□ 1.7
LIMD2-211ENST00000583211 TRPM3Q9HCF6 1732 aaPredicted RBP25.67■■□□□ 1.7
LIMD2-211ENST00000583211 CABP2Q9NPB3 220 aa25.67■■□□□ 1.7
LIMD2-211ENST00000583211 SPATA31A6Q5VVP1 1343 aa25.65■■□□□ 1.7
LIMD2-211ENST00000583211 PPIP5K1Q6PFW1 1433 aa25.64■■□□□ 1.7
LIMD2-211ENST00000583211 PSME1Q06323 249 aa25.64■■□□□ 1.7
LIMD2-211ENST00000583211 KRT28Q7Z3Y7 464 aa25.64■■□□□ 1.7
LIMD2-211ENST00000583211 TESK2Q96S53 571 aa25.64■■□□□ 1.7
LIMD2-211ENST00000583211 POLR3AO14802 1390 aaPredicted RBP25.64■■□□□ 1.69
LIMD2-211ENST00000583211 PNPLA6Q8IY17 1366 aa25.64■■□□□ 1.69
LIMD2-211ENST00000583211 PLEKHG3A1L390 1219 aa25.63■■□□□ 1.69
LIMD2-211ENST00000583211 XPCQ01831 940 aaPredicted RBP25.63■■□□□ 1.69
LIMD2-211ENST00000583211 ATAD2Q6PL18 1390 aa25.63■■□□□ 1.69
LIMD2-211ENST00000583211 SBNO1A3KN83 1393 aa25.62■■□□□ 1.69
LIMD2-211ENST00000583211 NGDNQ8NEJ9 315 aaKnown RBP25.62■■□□□ 1.69
LIMD2-211ENST00000583211 AKAP12Q02952 1782 aa25.61■■□□□ 1.69
LIMD2-211ENST00000583211 ALS2Q96Q42 1657 aa25.61■■□□□ 1.69
LIMD2-211ENST00000583211 PUS7Q96PZ0 661 aaKnown RBP25.6■■□□□ 1.69
LIMD2-211ENST00000583211 TNS3Q68CZ2 1445 aa25.6■■□□□ 1.69
LIMD2-211ENST00000583211 SPATA31A3Q5VYP0 1347 aa25.6■■□□□ 1.69
LIMD2-211ENST00000583211 ACEP12821 1306 aa25.58■■□□□ 1.69
LIMD2-211ENST00000583211 LRP6O75581 1613 aa25.55■■□□□ 1.68
LIMD2-211ENST00000583211 MARF1Q9Y4F3 1742 aaKnown RBP25.55■■□□□ 1.68
LIMD2-211ENST00000583211 EIF4G2P78344 907 aaKnown RBP eCLIP25.55■■□□□ 1.68
LIMD2-211ENST00000583211 CABP1Q9NZU7 370 aa25.55■■□□□ 1.68
LIMD2-211ENST00000583211 ARHGEF10O15013 1369 aa25.55■■□□□ 1.68
LIMD2-211ENST00000583211 TMF1P82094 1093 aa25.54■■□□□ 1.68
LIMD2-211ENST00000583211 MON2Q7Z3U7 1717 aa25.53■■□□□ 1.68
LIMD2-211ENST00000583211 ABCA3Q99758 1704 aa25.53■■□□□ 1.68
LIMD2-211ENST00000583211 BRD4O60885 1362 aaPredicted RBP25.53■■□□□ 1.68
LIMD2-211ENST00000583211 DISP3Q9P2K9 1392 aa25.52■■□□□ 1.68
LIMD2-211ENST00000583211 NINLQ9Y2I6 1382 aa25.51■■□□□ 1.67
LIMD2-211ENST00000583211 CDCA8Q53HL2 280 aa25.5■■□□□ 1.67
LIMD2-211ENST00000583211 CRYBG1Q9Y4K1 1723 aa25.49■■□□□ 1.67
LIMD2-211ENST00000583211 USP6P35125 1406 aa25.49■■□□□ 1.67
LIMD2-211ENST00000583211 CPSF1Q10570 1443 aaKnown RBP25.49■■□□□ 1.67
LIMD2-211ENST00000583211 NRKQ7Z2Y5 1582 aa25.48■■□□□ 1.67
LIMD2-211ENST00000583211 ZNF692Q9BU19 519 aaPredicted RBP25.48■■□□□ 1.67
LIMD2-211ENST00000583211 NUTM2BA6NNL0 878 aaPredicted RBP25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms