RNA–Protein interactions for RNA: ENST00000580980.1

PSMD3-205, Transcript of proteasome 26S subunit, non-ATPase 3, humanhuman

TSL 2

Gene PSMD3, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD3-205ENST00000580980 WAPLQ7Z5K2 1190 aa17.77■□□□□ 0.44
PSMD3-205ENST00000580980 CDC42BPGQ6DT37 1551 aa17.76■□□□□ 0.43
PSMD3-205ENST00000580980 LRRC59Q96AG4 307 aaKnown RBP17.76■□□□□ 0.43
PSMD3-205ENST00000580980 NHSL1Q5SYE7 1610 aa17.76■□□□□ 0.43
PSMD3-205ENST00000580980 ORAI2Q96SN7 254 aa17.74■□□□□ 0.43
PSMD3-205ENST00000580980 RGS17Q9UGC6 210 aaPredicted RBP17.74■□□□□ 0.43
PSMD3-205ENST00000580980 KDM2AQ9Y2K7 1162 aa17.74■□□□□ 0.43
PSMD3-205ENST00000580980 PLEKHH1Q9ULM0 1364 aa17.74■□□□□ 0.43
PSMD3-205ENST00000580980 SHPRHQ149N8 1683 aa17.74■□□□□ 0.43
PSMD3-205ENST00000580980 DLC1Q96QB1 1528 aa17.72■□□□□ 0.43
PSMD3-205ENST00000580980 SOS2Q07890 1332 aaPredicted RBP17.71■□□□□ 0.42
PSMD3-205ENST00000580980 ADGRB1O14514 1584 aa17.7■□□□□ 0.42
PSMD3-205ENST00000580980 ESCO1Q5FWF5 840 aa17.7■□□□□ 0.42
PSMD3-205ENST00000580980 DDX17Q92841 729 aaKnown RBP17.7■□□□□ 0.42
PSMD3-205ENST00000580980 PRAM1Q96QH2 718 aa17.69■□□□□ 0.42
PSMD3-205ENST00000580980 MEX3CQ5U5Q3 659 aaKnown RBP17.68■□□□□ 0.42
PSMD3-205ENST00000580980 POGKQ9P215 609 aa17.68■□□□□ 0.42
PSMD3-205ENST00000580980 LRP6O75581 1613 aa17.68■□□□□ 0.42
PSMD3-205ENST00000580980 NPHP3Q7Z494 1330 aa17.68■□□□□ 0.42
PSMD3-205ENST00000580980 PNPLA6Q8IY17 1366 aa17.67■□□□□ 0.42
PSMD3-205ENST00000580980 PCGF6Q9BYE7 350 aa17.67■□□□□ 0.42
PSMD3-205ENST00000580980 TRAK1Q9UPV9 953 aa17.66■□□□□ 0.42
PSMD3-205ENST00000580980 FMN2Q9NZ56 1722 aa17.65■□□□□ 0.42
PSMD3-205ENST00000580980 POTEAQ6S8J7 498 aa17.65■□□□□ 0.42
PSMD3-205ENST00000580980 NUTM2FA1L443 756 aa17.64■□□□□ 0.41
PSMD3-205ENST00000580980 NUTM2BA6NNL0 878 aaPredicted RBP17.64■□□□□ 0.41
PSMD3-205ENST00000580980 NUTM2EB1AL46 878 aaPredicted RBP17.64■□□□□ 0.41
PSMD3-205ENST00000580980 ZNF772Q68DY9 489 aaPredicted RBP17.64■□□□□ 0.41
PSMD3-205ENST00000580980 NUTM2AQ8IVF1 878 aaPredicted RBP17.64■□□□□ 0.41
PSMD3-205ENST00000580980 SAFB2Q14151 953 aaKnown RBP eCLIP17.63■□□□□ 0.41
PSMD3-205ENST00000580980 FOXO3O43524 673 aa17.62■□□□□ 0.41
PSMD3-205ENST00000580980 ANKARQ7Z5J8 1434 aa17.61■□□□□ 0.41
PSMD3-205ENST00000580980 PXDNQ92626 1479 aa17.61■□□□□ 0.41
PSMD3-205ENST00000580980 ADGRB2O60241 1585 aa17.61■□□□□ 0.41
PSMD3-205ENST00000580980 EIF3AQ14152 1382 aaKnown RBP17.6■□□□□ 0.41
PSMD3-205ENST00000580980 KIF1AQ12756 1690 aa17.6■□□□□ 0.41
PSMD3-205ENST00000580980 KIAA1210Q9ULL0 1709 aa17.6■□□□□ 0.41
PSMD3-205ENST00000580980 PHF8Q9UPP1 1060 aa17.59■□□□□ 0.41
PSMD3-205ENST00000580980 MINK1Q8N4C8 1332 aaPredicted RBP17.57■□□□□ 0.4
PSMD3-205ENST00000580980 L3MBTL2Q969R5 705 aa17.57■□□□□ 0.4
PSMD3-205ENST00000580980 COL22A1Q8NFW1 1626 aaPredicted RBP17.57■□□□□ 0.4
PSMD3-205ENST00000580980 WASLO00401 505 aaPredicted RBP17.56■□□□□ 0.4
PSMD3-205ENST00000580980 XPCQ01831 940 aaPredicted RBP17.56■□□□□ 0.4
PSMD3-205ENST00000580980 PSME1Q06323 249 aa17.56■□□□□ 0.4
PSMD3-205ENST00000580980 KRT28Q7Z3Y7 464 aa17.56■□□□□ 0.4
PSMD3-205ENST00000580980 SIN3AQ96ST3 1273 aa17.56■□□□□ 0.4
PSMD3-205ENST00000580980 HIRIP3Q9BW71 556 aaPredicted RBP17.56■□□□□ 0.4
PSMD3-205ENST00000580980 AFF2P51816 1311 aa17.55■□□□□ 0.4
PSMD3-205ENST00000580980 C8orf37Q96NL8 207 aa17.55■□□□□ 0.4
PSMD3-205ENST00000580980 SPATA31A3Q5VYP0 1347 aa17.54■□□□□ 0.4
PSMD3-205ENST00000580980 NBPF1Q3BBV0 1214 aa17.54■□□□□ 0.4
PSMD3-205ENST00000580980 ARHGEF28Q8N1W1 1705 aaKnown RBP17.53■□□□□ 0.4
PSMD3-205ENST00000580980 ADAMTS2O95450 1211 aa17.53■□□□□ 0.4
PSMD3-205ENST00000580980 NEUROD1Q13562 356 aa17.53■□□□□ 0.4
PSMD3-205ENST00000580980 NGLY1Q96IV0 654 aa17.53■□□□□ 0.4
PSMD3-205ENST00000580980 SBNO1A3KN83 1393 aa17.53■□□□□ 0.4
PSMD3-205ENST00000580980 TULP4Q9NRJ4 1543 aa17.52■□□□□ 0.4
PSMD3-205ENST00000580980 USP32Q8NFA0 1604 aa17.51■□□□□ 0.39
PSMD3-205ENST00000580980 RGPD8O14715 1765 aaPredicted RBP17.51■□□□□ 0.39
PSMD3-205ENST00000580980 RXRBP28702 533 aa17.51■□□□□ 0.39
PSMD3-205ENST00000580980 PRR36Q9H6K5 1346 aa17.5■□□□□ 0.39
PSMD3-205ENST00000580980 TNS3Q68CZ2 1445 aa17.5■□□□□ 0.39
PSMD3-205ENST00000580980 PMFBP1Q8TBY8 1022 aa17.5■□□□□ 0.39
PSMD3-205ENST00000580980 FNBP4Q8N3X1 1017 aaPredicted RBP17.49■□□□□ 0.39
PSMD3-205ENST00000580980 CDK19Q9BWU1 502 aa17.48■□□□□ 0.39
PSMD3-205ENST00000580980 QTRT2Q9H974 415 aaKnown RBP17.48■□□□□ 0.39
PSMD3-205ENST00000580980 ARHGEF10O15013 1369 aa17.48■□□□□ 0.39
PSMD3-205ENST00000580980 GPRASP1Q5JY77 1395 aa17.48■□□□□ 0.39
PSMD3-205ENST00000580980 CDK12Q9NYV4 1490 aaPredicted RBP17.48■□□□□ 0.39
PSMD3-205ENST00000580980 NUDT16Q96DE0 195 aaKnown RBP17.47■□□□□ 0.39
PSMD3-205ENST00000580980 CENPJQ9HC77 1338 aaPredicted RBP17.47■□□□□ 0.39
PSMD3-205ENST00000580980 RBM6P78332 1123 aaKnown RBP17.46■□□□□ 0.39
PSMD3-205ENST00000580980 USP21Q9UK80 565 aa17.46■□□□□ 0.39
PSMD3-205ENST00000580980 ATP7BP35670 1465 aa17.45■□□□□ 0.38
PSMD3-205ENST00000580980 NGDNQ8NEJ9 315 aaKnown RBP17.45■□□□□ 0.38
PSMD3-205ENST00000580980 TRPC5Q9UL62 973 aaPredicted RBP17.44■□□□□ 0.38
PSMD3-205ENST00000580980 CCDC61Q9Y6R9 512 aa17.44■□□□□ 0.38
PSMD3-205ENST00000580980 TRPM1Q7Z4N2 1603 aa17.43■□□□□ 0.38
PSMD3-205ENST00000580980 LMOD2Q6P5Q4 547 aa17.43■□□□□ 0.38
PSMD3-205ENST00000580980 ROCK2O75116 1388 aaKnown RBP17.42■□□□□ 0.38
PSMD3-205ENST00000580980 HAP1P54257 671 aaPredicted RBP17.42■□□□□ 0.38
PSMD3-205ENST00000580980 ITSN1Q15811 1721 aa17.41■□□□□ 0.38
PSMD3-205ENST00000580980 PLEKHG3A1L390 1219 aa17.41■□□□□ 0.38
PSMD3-205ENST00000580980 BCL9LQ86UU0 1499 aa17.41■□□□□ 0.38
PSMD3-205ENST00000580980 MARF1Q9Y4F3 1742 aaKnown RBP17.41■□□□□ 0.38
PSMD3-205ENST00000580980 POLR3AO14802 1390 aaPredicted RBP17.4■□□□□ 0.38
PSMD3-205ENST00000580980 TONSLQ96HA7 1378 aa17.4■□□□□ 0.38
PSMD3-205ENST00000580980 ATRNO75882 1429 aa17.4■□□□□ 0.38
PSMD3-205ENST00000580980 TRPM3Q9HCF6 1732 aaPredicted RBP17.4■□□□□ 0.38
PSMD3-205ENST00000580980 SRPK2P78362 688 aaKnown RBP17.39■□□□□ 0.37
PSMD3-205ENST00000580980 NBPF8Q3BBV2 869 aa17.39■□□□□ 0.37
PSMD3-205ENST00000580980 CABLES1Q8TDN4 633 aa17.39■□□□□ 0.37
PSMD3-205ENST00000580980 SLIT2O94813 1529 aa17.38■□□□□ 0.37
PSMD3-205ENST00000580980 UNC5CLQ8IV45 518 aa17.38■□□□□ 0.37
PSMD3-205ENST00000580980 ACEP12821 1306 aa17.38■□□□□ 0.37
PSMD3-205ENST00000580980 ALS2Q96Q42 1657 aa17.37■□□□□ 0.37
PSMD3-205ENST00000580980 PAK3O75914 559 aaPredicted RBP17.37■□□□□ 0.37
PSMD3-205ENST00000580980 EVC2Q86UK5 1308 aa17.37■□□□□ 0.37
PSMD3-205ENST00000580980 RGS12O14924 1447 aa17.37■□□□□ 0.37
PSMD3-205ENST00000580980 TOPAZ1Q8N9V7 1692 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms