RNA–Protein interactions for RNA: ENST00000580283.1

PPP4R1-216, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 378 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-216ENST00000580283 WDR97A6NE52 1622 aa11.98□□□□□ -0.49
PPP4R1-216ENST00000580283 SYNJ2O15056 1496 aa11.98□□□□□ -0.49
PPP4R1-216ENST00000580283 FGD5Q6ZNL6 1462 aa11.98□□□□□ -0.49
PPP4R1-216ENST00000580283 PCDHB3Q9Y5E6 796 aa11.98□□□□□ -0.49
PPP4R1-216ENST00000580283 ACTN4O43707 911 aaKnown RBP11.97□□□□□ -0.49
PPP4R1-216ENST00000580283 ITGBL1O95965 494 aaPredicted RBP11.97□□□□□ -0.49
PPP4R1-216ENST00000580283 KCNC4Q03721 635 aa11.97□□□□□ -0.49
PPP4R1-216ENST00000580283 GRIN2BQ13224 1484 aa11.96□□□□□ -0.49
PPP4R1-216ENST00000580283 MTRQ99707 1265 aa11.96□□□□□ -0.49
PPP4R1-216ENST00000580283 IL21Q9HBE4 155 aa11.96□□□□□ -0.49
PPP4R1-216ENST00000580283 PBRM1Q86U86 1689 aa11.96□□□□□ -0.5
PPP4R1-216ENST00000580283 COPS2P61201 443 aa11.95□□□□□ -0.5
PPP4R1-216ENST00000580283 FAM217BQ9NTX9 383 aaPredicted RBP11.95□□□□□ -0.5
PPP4R1-216ENST00000580283 CD46P15529 392 aa11.94□□□□□ -0.5
PPP4R1-216ENST00000580283 GCGRP47871 477 aa11.94□□□□□ -0.5
PPP4R1-216ENST00000580283 TMUB1Q9BVT8 246 aa11.94□□□□□ -0.5
PPP4R1-216ENST00000580283 CUX1P39880 1505 aa11.94□□□□□ -0.5
PPP4R1-216ENST00000580283 TPRNQ4KMQ1 711 aa11.93□□□□□ -0.5
PPP4R1-216ENST00000580283 TJAP1Q5JTD0 557 aa11.93□□□□□ -0.5
PPP4R1-216ENST00000580283 REPIN1Q9BWE0 567 aaKnown RBP11.93□□□□□ -0.5
PPP4R1-216ENST00000580283 SSTR3P32745 418 aaPredicted RBP11.92□□□□□ -0.5
PPP4R1-216ENST00000580283 PDE4DQ08499 809 aa11.92□□□□□ -0.5
PPP4R1-216ENST00000580283 GIGYF2Q6Y7W6 1299 aaKnown RBP11.92□□□□□ -0.5
PPP4R1-216ENST00000580283 IFFO2Q5TF58 517 aa11.91□□□□□ -0.5
PPP4R1-216ENST00000580283 BLOC1S3Q6QNY0 202 aa11.91□□□□□ -0.5
PPP4R1-216ENST00000580283 PARP9Q8IXQ6 854 aa11.91□□□□□ -0.5
PPP4R1-216ENST00000580283 NR1I2O75469 434 aa11.89□□□□□ -0.51
PPP4R1-216ENST00000580283 FUT2Q10981 343 aa11.89□□□□□ -0.51
PPP4R1-216ENST00000580283 GRIPAP1Q4V328 841 aa11.89□□□□□ -0.51
PPP4R1-216ENST00000580283 CEP170Q5SW79 1584 aa11.88□□□□□ -0.51
PPP4R1-216ENST00000580283 ATP6V1AP38606 617 aa11.88□□□□□ -0.51
PPP4R1-216ENST00000580283 PUS10Q3MIT2 529 aaKnown RBP11.88□□□□□ -0.51
PPP4R1-216ENST00000580283 ZNF516Q92618 1163 aa11.88□□□□□ -0.51
PPP4R1-216ENST00000580283 KDM4AO75164 1064 aa11.87□□□□□ -0.51
PPP4R1-216ENST00000580283 ZPR1O75312 459 aa11.87□□□□□ -0.51
PPP4R1-216ENST00000580283 NUTM1Q86Y26 1132 aa11.87□□□□□ -0.51
PPP4R1-216ENST00000580283 SHROOM2Q13796 1616 aa11.86□□□□□ -0.51
PPP4R1-216ENST00000580283 ABCA5Q8WWZ7 1642 aa11.86□□□□□ -0.51
PPP4R1-216ENST00000580283 USP46P62068 366 aa11.84□□□□□ -0.51
PPP4R1-216ENST00000580283 MORN1Q5T089 497 aa11.83□□□□□ -0.52
PPP4R1-216ENST00000580283 BEGAINQ9BUH8 593 aa11.83□□□□□ -0.52
PPP4R1-216ENST00000580283 GRIN2AQ12879 1464 aa11.83□□□□□ -0.52
PPP4R1-216ENST00000580283 A0A0G2JS52 829 aa11.82□□□□□ -0.52
PPP4R1-216ENST00000580283 SCUBE3Q8IX30 993 aa11.82□□□□□ -0.52
PPP4R1-216ENST00000580283 NUP160Q12769 1436 aa11.82□□□□□ -0.52
PPP4R1-216ENST00000580283 ABCA10Q8WWZ4 1543 aa11.81□□□□□ -0.52
PPP4R1-216ENST00000580283 MS4A1P11836 297 aa11.81□□□□□ -0.52
PPP4R1-216ENST00000580283 NKX2-3Q8TAU0 364 aa11.8□□□□□ -0.52
PPP4R1-216ENST00000580283 TLL1O43897 1013 aa11.79□□□□□ -0.52
PPP4R1-216ENST00000580283 SLC27A5Q9Y2P5 690 aa11.79□□□□□ -0.52
PPP4R1-216ENST00000580283 HOXA2O43364 376 aa11.78□□□□□ -0.52
PPP4R1-216ENST00000580283 ABCC10Q5T3U5 1492 aa11.77□□□□□ -0.52
PPP4R1-216ENST00000580283 ADAMTS12P58397 1594 aa11.77□□□□□ -0.53
PPP4R1-216ENST00000580283 ADH1BP00325 375 aa11.77□□□□□ -0.53
PPP4R1-216ENST00000580283 GGCXP38435 758 aa11.77□□□□□ -0.53
PPP4R1-216ENST00000580283 FAM69CQ0P6D2 419 aa11.77□□□□□ -0.53
PPP4R1-216ENST00000580283 DIXDC1Q155Q3 683 aa11.77□□□□□ -0.53
PPP4R1-216ENST00000580283 TSPOAP1O95153 1857 aa11.76□□□□□ -0.53
PPP4R1-216ENST00000580283 FMNL1O95466 1100 aaPredicted RBP11.76□□□□□ -0.53
PPP4R1-216ENST00000580283 Q3C1V9 767 aa11.76□□□□□ -0.53
PPP4R1-216ENST00000580283 SPIRE2Q8WWL2 714 aa11.76□□□□□ -0.53
PPP4R1-216ENST00000580283 GPBP1L1Q9HC44 474 aaPredicted RBP11.76□□□□□ -0.53
PPP4R1-216ENST00000580283 SPSB2Q99619 263 aa11.75□□□□□ -0.53
PPP4R1-216ENST00000580283 DIP2BQ9P265 1576 aa11.75□□□□□ -0.53
PPP4R1-216ENST00000580283 KDM4CQ9H3R0 1056 aa11.74□□□□□ -0.53
PPP4R1-216ENST00000580283 PPP1R18Q6NYC8 613 aa11.73□□□□□ -0.53
PPP4R1-216ENST00000580283 PRG4Q92954 1404 aaPredicted RBP11.73□□□□□ -0.53
PPP4R1-216ENST00000580283 HLA-CQ95604 372 aa11.73□□□□□ -0.53
PPP4R1-216ENST00000580283 TBC1D2Q9BYX2 928 aa11.73□□□□□ -0.53
PPP4R1-216ENST00000580283 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.73□□□□□ -0.53
PPP4R1-216ENST00000580283 SALL2Q9Y467 1007 aaPredicted RBP11.73□□□□□ -0.53
PPP4R1-216ENST00000580283 KDM6BO15054 1643 aa11.72□□□□□ -0.53
PPP4R1-216ENST00000580283 NEUROD2Q15784 382 aa11.72□□□□□ -0.53
PPP4R1-216ENST00000580283 ADCY10Q96PN6 1610 aa11.71□□□□□ -0.53
PPP4R1-216ENST00000580283 MAPKBP1O60336 1514 aa11.71□□□□□ -0.53
PPP4R1-216ENST00000580283 FDX1P10109 184 aa11.71□□□□□ -0.53
PPP4R1-216ENST00000580283 PRKCSHP14314 528 aaPredicted RBP11.71□□□□□ -0.53
PPP4R1-216ENST00000580283 GUCA2AQ02747 115 aa11.71□□□□□ -0.53
PPP4R1-216ENST00000580283 SLC6A16Q9GZN6 736 aa11.71□□□□□ -0.53
PPP4R1-216ENST00000580283 MOXD2PA6NHM9 499 aa11.7□□□□□ -0.54
PPP4R1-216ENST00000580283 BRICD5Q6PL45 260 aa11.7□□□□□ -0.54
PPP4R1-216ENST00000580283 RNF19BQ6ZMZ0 732 aa11.7□□□□□ -0.54
PPP4R1-216ENST00000580283 THAP11Q96EK4 314 aa11.7□□□□□ -0.54
PPP4R1-216ENST00000580283 FHAD1B1AJZ9 1412 aa11.69□□□□□ -0.54
PPP4R1-216ENST00000580283 S1PR4O95977 384 aa11.69□□□□□ -0.54
PPP4R1-216ENST00000580283 NDUFV2P19404 249 aa11.69□□□□□ -0.54
PPP4R1-216ENST00000580283 DDRGK1Q96HY6 314 aa11.68□□□□□ -0.54
PPP4R1-216ENST00000580283 RGS20O76081 388 aa11.67□□□□□ -0.54
PPP4R1-216ENST00000580283 USB1Q9BQ65 265 aaKnown RBP11.66□□□□□ -0.54
PPP4R1-216ENST00000580283 RSPH6AQ9H0K4 717 aa11.66□□□□□ -0.54
PPP4R1-216ENST00000580283 C6orf229H3BNL8 230 aa11.65□□□□□ -0.54
PPP4R1-216ENST00000580283 RSBN1LQ6PCB5 846 aaPredicted RBP11.65□□□□□ -0.54
PPP4R1-216ENST00000580283 FAM117AQ9C073 453 aa11.65□□□□□ -0.54
PPP4R1-216ENST00000580283 ERICH3Q5RHP9 1530 aa11.65□□□□□ -0.55
PPP4R1-216ENST00000580283 PPRC1Q5VV67 1664 aaKnown RBP11.65□□□□□ -0.55
PPP4R1-216ENST00000580283 WRNQ14191 1432 aaPredicted RBP eCLIP11.64□□□□□ -0.55
PPP4R1-216ENST00000580283 RNF223E7ERA6 249 aa11.64□□□□□ -0.55
PPP4R1-216ENST00000580283 GJA5P36382 358 aa11.64□□□□□ -0.55
PPP4R1-216ENST00000580283 MSS51Q4VC12 460 aa11.64□□□□□ -0.55
PPP4R1-216ENST00000580283 RIC3Q7Z5B4 369 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms