RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 POGKQ9P215 609 aa15.89■□□□□ 0.13
CDK5RAP3-210ENST00000578733 PROSER2Q86WR7 435 aaPredicted RBP15.88■□□□□ 0.13
CDK5RAP3-210ENST00000578733 USP47Q96K76 1375 aa15.87■□□□□ 0.13
CDK5RAP3-210ENST00000578733 NCOA3Q9Y6Q9 1424 aa15.87■□□□□ 0.13
CDK5RAP3-210ENST00000578733 SLC24A1O60721 1099 aa15.87■□□□□ 0.13
CDK5RAP3-210ENST00000578733 NALCNQ8IZF0 1738 aa15.87■□□□□ 0.13
CDK5RAP3-210ENST00000578733 EIF4G2P78344 907 aaKnown RBP eCLIP15.86■□□□□ 0.13
CDK5RAP3-210ENST00000578733 CENPJQ9HC77 1338 aaPredicted RBP15.86■□□□□ 0.13
CDK5RAP3-210ENST00000578733 ROBO2Q9HCK4 1378 aa15.86■□□□□ 0.13
CDK5RAP3-210ENST00000578733 C14orf37Q86TY3 774 aa15.85■□□□□ 0.13
CDK5RAP3-210ENST00000578733 PRAM1Q96QH2 718 aa15.85■□□□□ 0.13
CDK5RAP3-210ENST00000578733 RGS17Q9UGC6 210 aaPredicted RBP15.85■□□□□ 0.13
CDK5RAP3-210ENST00000578733 ADGRB2O60241 1585 aa15.84■□□□□ 0.13
CDK5RAP3-210ENST00000578733 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.84■□□□□ 0.13
CDK5RAP3-210ENST00000578733 TMEM94Q12767 1356 aa15.82■□□□□ 0.12
CDK5RAP3-210ENST00000578733 CDC42BPGQ6DT37 1551 aa15.82■□□□□ 0.12
CDK5RAP3-210ENST00000578733 ITSN1Q15811 1721 aa15.82■□□□□ 0.12
CDK5RAP3-210ENST00000578733 MSH6P52701 1360 aa15.81■□□□□ 0.12
CDK5RAP3-210ENST00000578733 WAPLQ7Z5K2 1190 aa15.81■□□□□ 0.12
CDK5RAP3-210ENST00000578733 ADGRL3Q9HAR2 1447 aa15.81■□□□□ 0.12
CDK5RAP3-210ENST00000578733 FMN2Q9NZ56 1722 aa15.8■□□□□ 0.12
CDK5RAP3-210ENST00000578733 SBNO2Q9Y2G9 1366 aa15.8■□□□□ 0.12
CDK5RAP3-210ENST00000578733 SAFB2Q14151 953 aaKnown RBP eCLIP15.8■□□□□ 0.12
CDK5RAP3-210ENST00000578733 PLEKHH1Q9ULM0 1364 aa15.79■□□□□ 0.12
CDK5RAP3-210ENST00000578733 ST20-MTHFSA0A0A6YYL1 179 aa15.79■□□□□ 0.12
CDK5RAP3-210ENST00000578733 DCCP43146 1447 aa15.78■□□□□ 0.12
CDK5RAP3-210ENST00000578733 C19orf44Q9H6X5 657 aa15.78■□□□□ 0.12
CDK5RAP3-210ENST00000578733 MINK1Q8N4C8 1332 aaPredicted RBP15.77■□□□□ 0.12
CDK5RAP3-210ENST00000578733 HSPA5P11021 654 aaKnown RBP15.77■□□□□ 0.12
CDK5RAP3-210ENST00000578733 RGPD8O14715 1765 aaPredicted RBP15.77■□□□□ 0.11
CDK5RAP3-210ENST00000578733 EVC2Q86UK5 1308 aa15.76■□□□□ 0.11
CDK5RAP3-210ENST00000578733 TMF1P82094 1093 aa15.76■□□□□ 0.11
CDK5RAP3-210ENST00000578733 ATF3P18847 181 aa15.75■□□□□ 0.11
CDK5RAP3-210ENST00000578733 CDCA8Q53HL2 280 aa15.75■□□□□ 0.11
CDK5RAP3-210ENST00000578733 POTEAQ6S8J7 498 aa15.75■□□□□ 0.11
CDK5RAP3-210ENST00000578733 CADPS2Q86UW7 1296 aa15.74■□□□□ 0.11
CDK5RAP3-210ENST00000578733 RBM33Q96EV2 1170 aaKnown RBP15.74■□□□□ 0.11
CDK5RAP3-210ENST00000578733 HIRIP3Q9BW71 556 aaPredicted RBP15.73■□□□□ 0.11
CDK5RAP3-210ENST00000578733 TULP4Q9NRJ4 1543 aa15.73■□□□□ 0.11
CDK5RAP3-210ENST00000578733 WASLO00401 505 aaPredicted RBP15.72■□□□□ 0.11
CDK5RAP3-210ENST00000578733 KIF1AQ12756 1690 aa15.72■□□□□ 0.11
CDK5RAP3-210ENST00000578733 ROBO1Q9Y6N7 1651 aa15.72■□□□□ 0.11
CDK5RAP3-210ENST00000578733 ANKARQ7Z5J8 1434 aa15.71■□□□□ 0.11
CDK5RAP3-210ENST00000578733 TOPAZ1Q8N9V7 1692 aa15.71■□□□□ 0.11
CDK5RAP3-210ENST00000578733 SRPK2P78362 688 aaKnown RBP15.71■□□□□ 0.11
CDK5RAP3-210ENST00000578733 TESK2Q96S53 571 aa15.71■□□□□ 0.11
CDK5RAP3-210ENST00000578733 CDK19Q9BWU1 502 aa15.7■□□□□ 0.1
CDK5RAP3-210ENST00000578733 USP32Q8NFA0 1604 aa15.69■□□□□ 0.1
CDK5RAP3-210ENST00000578733 PUS7Q96PZ0 661 aaKnown RBP15.69■□□□□ 0.1
CDK5RAP3-210ENST00000578733 ATAD2Q6PL18 1390 aa15.69■□□□□ 0.1
CDK5RAP3-210ENST00000578733 MST1RQ04912 1400 aa15.66■□□□□ 0.1
CDK5RAP3-210ENST00000578733 ATP7BP35670 1465 aa15.65■□□□□ 0.1
CDK5RAP3-210ENST00000578733 JCADQ9P266 1359 aa15.65■□□□□ 0.1
CDK5RAP3-210ENST00000578733 NINLQ9Y2I6 1382 aa15.65■□□□□ 0.1
CDK5RAP3-210ENST00000578733 AKAP12Q02952 1782 aa15.65■□□□□ 0.1
CDK5RAP3-210ENST00000578733 MYOM1P52179 1685 aa15.65■□□□□ 0.1
CDK5RAP3-210ENST00000578733 CABP2Q9NPB3 220 aa15.65■□□□□ 0.1
CDK5RAP3-210ENST00000578733 PHLPP1O60346 1717 aa15.64■□□□□ 0.09
CDK5RAP3-210ENST00000578733 NUDT16Q96DE0 195 aaKnown RBP15.64■□□□□ 0.09
CDK5RAP3-210ENST00000578733 POLR3GLQ9BT43 218 aa15.64■□□□□ 0.09
CDK5RAP3-210ENST00000578733 C1orf167Q5SNV9 1468 aa15.64■□□□□ 0.09
CDK5RAP3-210ENST00000578733 PPIP5K1Q6PFW1 1433 aa15.63■□□□□ 0.09
CDK5RAP3-210ENST00000578733 NUTM2FA1L443 756 aa15.63■□□□□ 0.09
CDK5RAP3-210ENST00000578733 SLAIN2Q9P270 581 aa15.63■□□□□ 0.09
CDK5RAP3-210ENST00000578733 CCDC61Q9Y6R9 512 aa15.63■□□□□ 0.09
CDK5RAP3-210ENST00000578733 ESCO1Q5FWF5 840 aa15.62■□□□□ 0.09
CDK5RAP3-210ENST00000578733 NHSL1Q5SYE7 1610 aa15.61■□□□□ 0.09
CDK5RAP3-210ENST00000578733 MON2Q7Z3U7 1717 aa15.61■□□□□ 0.09
CDK5RAP3-210ENST00000578733 TMC1Q8TDI8 760 aa15.61■□□□□ 0.09
CDK5RAP3-210ENST00000578733 ZNF316A6NFI3 1004 aaPredicted RBP15.6■□□□□ 0.09
CDK5RAP3-210ENST00000578733 CCDC7Q96M83 1385 aa15.6■□□□□ 0.09
CDK5RAP3-210ENST00000578733 ZNF772Q68DY9 489 aaPredicted RBP15.59■□□□□ 0.09
CDK5RAP3-210ENST00000578733 PHF8Q9UPP1 1060 aa15.59■□□□□ 0.09
CDK5RAP3-210ENST00000578733 KIF7Q2M1P5 1343 aa15.59■□□□□ 0.09
CDK5RAP3-210ENST00000578733 SPATA31A6Q5VVP1 1343 aa15.59■□□□□ 0.09
CDK5RAP3-210ENST00000578733 PRR36Q9H6K5 1346 aa15.59■□□□□ 0.09
CDK5RAP3-210ENST00000578733 HDGFL2Q7Z4V5 671 aaPredicted RBP15.58■□□□□ 0.08
CDK5RAP3-210ENST00000578733 NGDNQ8NEJ9 315 aaKnown RBP15.58■□□□□ 0.08
CDK5RAP3-210ENST00000578733 TERF2IPQ9NYB0 399 aa15.58■□□□□ 0.08
CDK5RAP3-210ENST00000578733 COL16A1Q07092 1604 aaPredicted RBP15.57■□□□□ 0.08
CDK5RAP3-210ENST00000578733 UPF1Q92900 1129 aaKnown RBP eCLIP15.57■□□□□ 0.08
CDK5RAP3-210ENST00000578733 PLEKHG3A1L390 1219 aa15.56■□□□□ 0.08
CDK5RAP3-210ENST00000578733 ORAI2Q96SN7 254 aa15.56■□□□□ 0.08
CDK5RAP3-210ENST00000578733 ZNF692Q9BU19 519 aaPredicted RBP15.56■□□□□ 0.08
CDK5RAP3-210ENST00000578733 CABP1Q9NZU7 370 aa15.56■□□□□ 0.08
CDK5RAP3-210ENST00000578733 WASHC2AQ641Q2 1341 aa15.56■□□□□ 0.08
CDK5RAP3-210ENST00000578733 AHDC1Q5TGY3 1603 aaPredicted RBP15.56■□□□□ 0.08
CDK5RAP3-210ENST00000578733 KIF20BQ96Q89 1820 aa15.56■□□□□ 0.08
CDK5RAP3-210ENST00000578733 NPHP3Q7Z494 1330 aa15.55■□□□□ 0.08
CDK5RAP3-210ENST00000578733 C11orf95C9JLR9 678 aaPredicted RBP15.55■□□□□ 0.08
CDK5RAP3-210ENST00000578733 MEX3CQ5U5Q3 659 aaKnown RBP15.55■□□□□ 0.08
CDK5RAP3-210ENST00000578733 BRINP3Q76B58 766 aa15.55■□□□□ 0.08
CDK5RAP3-210ENST00000578733 PMFBP1Q8TBY8 1022 aa15.55■□□□□ 0.08
CDK5RAP3-210ENST00000578733 POLR3AO14802 1390 aaPredicted RBP15.54■□□□□ 0.08
CDK5RAP3-210ENST00000578733 BRD4O60885 1362 aaPredicted RBP15.54■□□□□ 0.08
CDK5RAP3-210ENST00000578733 ANKRD36BQ8N2N9 1353 aa15.54■□□□□ 0.08
CDK5RAP3-210ENST00000578733 ACEP12821 1306 aa15.53■□□□□ 0.08
CDK5RAP3-210ENST00000578733 PSME1Q06323 249 aa15.53■□□□□ 0.08
CDK5RAP3-210ENST00000578733 NRKQ7Z2Y5 1582 aa15.53■□□□□ 0.08
CDK5RAP3-210ENST00000578733 KTN1Q86UP2 1357 aaKnown RBP15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms