RNA–Protein interactions for RNA: ENST00000578412.1

TOP2A-204, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 882 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-204ENST00000578412 AMHR2Q16671 573 aa8.68□□□□□ -1.02
TOP2A-204ENST00000578412 ZNF598Q86UK7 904 aaKnown RBP8.68□□□□□ -1.02
TOP2A-204ENST00000578412 SYMPKQ92797 1274 aaKnown RBP8.68□□□□□ -1.02
TOP2A-204ENST00000578412 AK7Q96M32 723 aa8.68□□□□□ -1.02
TOP2A-204ENST00000578412 MSS51Q4VC12 460 aa8.67□□□□□ -1.02
TOP2A-204ENST00000578412 USB1Q9BQ65 265 aaKnown RBP8.67□□□□□ -1.02
TOP2A-204ENST00000578412 TNFRSF10AO00220 468 aa8.66□□□□□ -1.02
TOP2A-204ENST00000578412 TRIM67Q6ZTA4 783 aa8.66□□□□□ -1.02
TOP2A-204ENST00000578412 SLC24A3Q9HC58 644 aa8.66□□□□□ -1.02
TOP2A-204ENST00000578412 NDUFV2P19404 249 aa8.65□□□□□ -1.02
TOP2A-204ENST00000578412 FOXC1Q12948 553 aa8.65□□□□□ -1.02
TOP2A-204ENST00000578412 PARP9Q8IXQ6 854 aa8.65□□□□□ -1.02
TOP2A-204ENST00000578412 SPIRE2Q8WWL2 714 aa8.65□□□□□ -1.02
TOP2A-204ENST00000578412 BEGAINQ9BUH8 593 aa8.65□□□□□ -1.02
TOP2A-204ENST00000578412 FDX1P10109 184 aa8.64□□□□□ -1.03
TOP2A-204ENST00000578412 C6orf229H3BNL8 230 aa8.63□□□□□ -1.03
TOP2A-204ENST00000578412 ZBTB24O43167 697 aaPredicted RBP8.63□□□□□ -1.03
TOP2A-204ENST00000578412 CCDC24Q8N4L8 307 aa8.63□□□□□ -1.03
TOP2A-204ENST00000578412 MOXD2PA6NHM9 499 aa8.62□□□□□ -1.03
TOP2A-204ENST00000578412 CD2BP2O95400 341 aaKnown RBP8.62□□□□□ -1.03
TOP2A-204ENST00000578412 BCANQ96GW7 911 aa8.62□□□□□ -1.03
TOP2A-204ENST00000578412 PCDHGC3Q9UN70 934 aa8.62□□□□□ -1.03
TOP2A-204ENST00000578412 MS4A1P11836 297 aa8.61□□□□□ -1.03
TOP2A-204ENST00000578412 RPIAP49247 311 aa8.61□□□□□ -1.03
TOP2A-204ENST00000578412 MMP16P51512 607 aa8.61□□□□□ -1.03
TOP2A-204ENST00000578412 PDE4DQ08499 809 aa8.61□□□□□ -1.03
TOP2A-204ENST00000578412 GDF9O60383 454 aa8.6□□□□□ -1.03
TOP2A-204ENST00000578412 DXOO77932 396 aaKnown RBP8.6□□□□□ -1.03
TOP2A-204ENST00000578412 PRR20EP86478 221 aa8.59□□□□□ -1.03
TOP2A-204ENST00000578412 PRR20CP86479 221 aa8.59□□□□□ -1.03
TOP2A-204ENST00000578412 PRR20DP86480 221 aa8.59□□□□□ -1.03
TOP2A-204ENST00000578412 PRR20BP86481 221 aa8.59□□□□□ -1.03
TOP2A-204ENST00000578412 PRR20AP86496 221 aa8.59□□□□□ -1.03
TOP2A-204ENST00000578412 TBC1D2Q9BYX2 928 aa8.59□□□□□ -1.03
TOP2A-204ENST00000578412 PKDCCQ504Y2 493 aa8.58□□□□□ -1.04
TOP2A-204ENST00000578412 RETREG3Q86VR2 466 aa8.58□□□□□ -1.04
TOP2A-204ENST00000578412 PKD2L1Q9P0L9 805 aa8.58□□□□□ -1.04
TOP2A-204ENST00000578412 FAM187AA6NFU0 413 aa8.57□□□□□ -1.04
TOP2A-204ENST00000578412 JUNDP17535 347 aa8.57□□□□□ -1.04
TOP2A-204ENST00000578412 TRIM32Q13049 653 aa8.56□□□□□ -1.04
TOP2A-204ENST00000578412 MTMR2Q13614 643 aa8.54□□□□□ -1.04
TOP2A-204ENST00000578412 CSPP1Q1MSJ5 1256 aa8.54□□□□□ -1.04
TOP2A-204ENST00000578412 RSBN1LQ6PCB5 846 aaPredicted RBP8.54□□□□□ -1.04
TOP2A-204ENST00000578412 PRR7Q8TB68 274 aa8.54□□□□□ -1.04
TOP2A-204ENST00000578412 PCDHB15Q9Y5E8 787 aa8.54□□□□□ -1.04
TOP2A-204ENST00000578412 DGAT1O75907 488 aa8.53□□□□□ -1.04
TOP2A-204ENST00000578412 DIXDC1Q155Q3 683 aa8.53□□□□□ -1.04
TOP2A-204ENST00000578412 ZNF787Q6DD87 383 aa8.53□□□□□ -1.04
TOP2A-204ENST00000578412 CYP4X1Q8N118 509 aa8.53□□□□□ -1.04
TOP2A-204ENST00000578412 NUDT12Q9BQG2 462 aa8.53□□□□□ -1.04
TOP2A-204ENST00000578412 PTCRAQ6ISU1 281 aaPredicted RBP8.52□□□□□ -1.05
TOP2A-204ENST00000578412 RIC3Q7Z5B4 369 aa8.52□□□□□ -1.05
TOP2A-204ENST00000578412 MYT1Q01538 1121 aa8.51□□□□□ -1.05
TOP2A-204ENST00000578412 ZNF775Q96BV0 537 aaPredicted RBP8.51□□□□□ -1.05
TOP2A-204ENST00000578412 TTC24A2A3L6 582 aaPredicted RBP8.5□□□□□ -1.05
TOP2A-204ENST00000578412 SPTLC1O15269 473 aa8.5□□□□□ -1.05
TOP2A-204ENST00000578412 CABLES1Q8TDN4 633 aa8.5□□□□□ -1.05
TOP2A-204ENST00000578412 SPDYE5A6NIY4 337 aa8.49□□□□□ -1.05
TOP2A-204ENST00000578412 WNT7AO00755 349 aa8.49□□□□□ -1.05
TOP2A-204ENST00000578412 CCNYL3P0C7X3 344 aa8.49□□□□□ -1.05
TOP2A-204ENST00000578412 MRGPRX2Q96LB1 330 aa8.49□□□□□ -1.05
TOP2A-204ENST00000578412 TOR4AQ9NXH8 423 aa8.49□□□□□ -1.05
TOP2A-204ENST00000578412 POTECB2RU33 542 aa8.48□□□□□ -1.05
TOP2A-204ENST00000578412 ST8SIA5O15466 376 aa8.48□□□□□ -1.05
TOP2A-204ENST00000578412 HRCP23327 699 aa8.48□□□□□ -1.05
TOP2A-204ENST00000578412 GJA5P36382 358 aa8.48□□□□□ -1.05
TOP2A-204ENST00000578412 MYSM1Q5VVJ2 828 aa8.48□□□□□ -1.05
TOP2A-204ENST00000578412 LIMD1Q9UGP4 676 aa8.48□□□□□ -1.05
TOP2A-204ENST00000578412 NUTM2BA6NNL0 878 aaPredicted RBP8.47□□□□□ -1.05
TOP2A-204ENST00000578412 NUTM2EB1AL46 878 aaPredicted RBP8.47□□□□□ -1.05
TOP2A-204ENST00000578412 CFAP99D6REC4 459 aa8.47□□□□□ -1.05
TOP2A-204ENST00000578412 SKOR1P84550 965 aa8.47□□□□□ -1.05
TOP2A-204ENST00000578412 PTPRNQ16849 979 aa8.47□□□□□ -1.05
TOP2A-204ENST00000578412 RC3H1Q5TC82 1133 aaKnown RBP8.47□□□□□ -1.05
TOP2A-204ENST00000578412 NUTM2DQ5VT03 806 aaPredicted RBP8.47□□□□□ -1.05
TOP2A-204ENST00000578412 NUTM2AQ8IVF1 878 aaPredicted RBP8.47□□□□□ -1.05
TOP2A-204ENST00000578412 TSC1Q92574 1164 aa8.47□□□□□ -1.05
TOP2A-204ENST00000578412 ZBTB3Q9H5J0 574 aa8.47□□□□□ -1.05
TOP2A-204ENST00000578412 GPBP1L1Q9HC44 474 aaPredicted RBP8.47□□□□□ -1.05
TOP2A-204ENST00000578412 CCDC180Q9P1Z9 1646 aa8.47□□□□□ -1.05
TOP2A-204ENST00000578412 POLR3EQ9NVU0 708 aa8.46□□□□□ -1.06
TOP2A-204ENST00000578412 CTHP32929 405 aa8.45□□□□□ -1.06
TOP2A-204ENST00000578412 QPCTQ16769 361 aa8.45□□□□□ -1.06
TOP2A-204ENST00000578412 LINC01559Q495D7 138 aa8.45□□□□□ -1.06
TOP2A-204ENST00000578412 SNIP1Q8TAD8 396 aaKnown RBP8.45□□□□□ -1.06
TOP2A-204ENST00000578412 EVA1BQ9NVM1 165 aa8.45□□□□□ -1.06
TOP2A-204ENST00000578412 J3QL48 77 aa8.44□□□□□ -1.06
TOP2A-204ENST00000578412 WNT7BP56706 349 aa8.44□□□□□ -1.06
TOP2A-204ENST00000578412 KCNH2Q12809 1159 aa8.44□□□□□ -1.06
TOP2A-204ENST00000578412 DESI1Q6ICB0 168 aa8.44□□□□□ -1.06
TOP2A-204ENST00000578412 UNC93B1Q9H1C4 597 aa8.44□□□□□ -1.06
TOP2A-204ENST00000578412 AAASQ9NRG9 546 aa8.44□□□□□ -1.06
TOP2A-204ENST00000578412 ATP1B4Q9UN42 357 aaPredicted RBP8.44□□□□□ -1.06
TOP2A-204ENST00000578412 SMPD1P17405 629 aa8.43□□□□□ -1.06
TOP2A-204ENST00000578412 PRPF38BQ5VTL8 546 aaKnown RBP8.43□□□□□ -1.06
TOP2A-204ENST00000578412 EHBP1Q8NDI1 1231 aa8.43□□□□□ -1.06
TOP2A-204ENST00000578412 BAP1Q92560 729 aa8.43□□□□□ -1.06
TOP2A-204ENST00000578412 KDM4CQ9H3R0 1056 aa8.43□□□□□ -1.06
TOP2A-204ENST00000578412 CLK2P49760 499 aaKnown RBP8.42□□□□□ -1.06
TOP2A-204ENST00000578412 SH3BP2P78314 561 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 284 ms