RNA–Protein interactions for RNA: ENST00000578122.5

IFT20-206, Transcript of intraflagellar transport 20, humanhuman

TSL 2 BASIC

Gene IFT20, Length 834 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-206ENST00000578122 NBPF1Q3BBV0 1214 aa22.05■■□□□ 1.12
IFT20-206ENST00000578122 C19orf44Q9H6X5 657 aa22.05■■□□□ 1.12
IFT20-206ENST00000578122 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.05■■□□□ 1.12
IFT20-206ENST00000578122 TRPM1Q7Z4N2 1603 aa22.05■■□□□ 1.12
IFT20-206ENST00000578122 NBPF8Q3BBV2 869 aa22.04■■□□□ 1.12
IFT20-206ENST00000578122 WAPLQ7Z5K2 1190 aa22.04■■□□□ 1.12
IFT20-206ENST00000578122 SIRT1Q96EB6 747 aa22.04■■□□□ 1.12
IFT20-206ENST00000578122 TRAK1Q9UPV9 953 aa22.03■■□□□ 1.12
IFT20-206ENST00000578122 NALCNQ8IZF0 1738 aa22.03■■□□□ 1.12
IFT20-206ENST00000578122 DLC1Q96QB1 1528 aa22.02■■□□□ 1.12
IFT20-206ENST00000578122 TIMELESSQ9UNS1 1208 aa22.02■■□□□ 1.12
IFT20-206ENST00000578122 FAM135BQ49AJ0 1406 aa22.02■■□□□ 1.12
IFT20-206ENST00000578122 ADGRL3Q9HAR2 1447 aa22.02■■□□□ 1.12
IFT20-206ENST00000578122 PLEKHH1Q9ULM0 1364 aa22■■□□□ 1.11
IFT20-206ENST00000578122 ATF3P18847 181 aa22■■□□□ 1.11
IFT20-206ENST00000578122 PIP4K2BP78356 416 aa21.99■■□□□ 1.11
IFT20-206ENST00000578122 ILDR1Q86SU0 546 aaPredicted RBP21.99■■□□□ 1.11
IFT20-206ENST00000578122 CADPS2Q86UW7 1296 aa21.99■■□□□ 1.11
IFT20-206ENST00000578122 PRAM1Q96QH2 718 aa21.99■■□□□ 1.11
IFT20-206ENST00000578122 POGKQ9P215 609 aa21.99■■□□□ 1.11
IFT20-206ENST00000578122 U3KPZ7 1027 aaPredicted RBP21.99■■□□□ 1.11
IFT20-206ENST00000578122 DCCP43146 1447 aa21.97■■□□□ 1.11
IFT20-206ENST00000578122 ARHGEF28Q8N1W1 1705 aaKnown RBP21.97■■□□□ 1.11
IFT20-206ENST00000578122 ROCK2O75116 1388 aaKnown RBP21.97■■□□□ 1.11
IFT20-206ENST00000578122 SAFB2Q14151 953 aaKnown RBP eCLIP21.95■■□□□ 1.1
IFT20-206ENST00000578122 SLAIN2Q9P270 581 aa21.95■■□□□ 1.1
IFT20-206ENST00000578122 RALGAPBQ86X10 1494 aa21.94■■□□□ 1.1
IFT20-206ENST00000578122 GPRASP1Q5JY77 1395 aa21.92■■□□□ 1.1
IFT20-206ENST00000578122 CDC42BPGQ6DT37 1551 aa21.91■■□□□ 1.1
IFT20-206ENST00000578122 MST1RQ04912 1400 aa21.89■■□□□ 1.1
IFT20-206ENST00000578122 CARD11Q9BXL7 1154 aa21.89■■□□□ 1.09
IFT20-206ENST00000578122 ROBO1Q9Y6N7 1651 aa21.88■■□□□ 1.09
IFT20-206ENST00000578122 MINK1Q8N4C8 1332 aaPredicted RBP21.88■■□□□ 1.09
IFT20-206ENST00000578122 FMN2Q9NZ56 1722 aa21.86■■□□□ 1.09
IFT20-206ENST00000578122 SLC4A2P04920 1241 aa21.86■■□□□ 1.09
IFT20-206ENST00000578122 ADGRB2O60241 1585 aa21.86■■□□□ 1.09
IFT20-206ENST00000578122 CENPJQ9HC77 1338 aaPredicted RBP21.85■■□□□ 1.09
IFT20-206ENST00000578122 HIRIP3Q9BW71 556 aaPredicted RBP21.85■■□□□ 1.09
IFT20-206ENST00000578122 C1orf167Q5SNV9 1468 aa21.84■■□□□ 1.09
IFT20-206ENST00000578122 QRICH2Q9H0J4 1663 aa21.84■■□□□ 1.09
IFT20-206ENST00000578122 EIF3AQ14152 1382 aaKnown RBP21.84■■□□□ 1.09
IFT20-206ENST00000578122 NUTM2FA1L443 756 aa21.82■■□□□ 1.08
IFT20-206ENST00000578122 HSPA1LP34931 641 aa21.81■■□□□ 1.08
IFT20-206ENST00000578122 BRINP3Q76B58 766 aa21.81■■□□□ 1.08
IFT20-206ENST00000578122 RGPD8O14715 1765 aaPredicted RBP21.8■■□□□ 1.08
IFT20-206ENST00000578122 WASLO00401 505 aaPredicted RBP21.8■■□□□ 1.08
IFT20-206ENST00000578122 ORAI2Q96SN7 254 aa21.78■■□□□ 1.08
IFT20-206ENST00000578122 ESCO1Q5FWF5 840 aa21.77■■□□□ 1.08
IFT20-206ENST00000578122 PHLPP1O60346 1717 aa21.76■■□□□ 1.07
IFT20-206ENST00000578122 CDK19Q9BWU1 502 aa21.76■■□□□ 1.07
IFT20-206ENST00000578122 ANKARQ7Z5J8 1434 aa21.75■■□□□ 1.07
IFT20-206ENST00000578122 USP32Q8NFA0 1604 aa21.75■■□□□ 1.07
IFT20-206ENST00000578122 TULP4Q9NRJ4 1543 aa21.75■■□□□ 1.07
IFT20-206ENST00000578122 AHDC1Q5TGY3 1603 aaPredicted RBP21.74■■□□□ 1.07
IFT20-206ENST00000578122 NHSL1Q5SYE7 1610 aa21.73■■□□□ 1.07
IFT20-206ENST00000578122 USP47Q96K76 1375 aa21.73■■□□□ 1.07
IFT20-206ENST00000578122 PRR36Q9H6K5 1346 aa21.72■■□□□ 1.07
IFT20-206ENST00000578122 KIF1AQ12756 1690 aa21.72■■□□□ 1.07
IFT20-206ENST00000578122 NUDT16Q96DE0 195 aaKnown RBP21.71■■□□□ 1.07
IFT20-206ENST00000578122 EVC2Q86UK5 1308 aa21.71■■□□□ 1.07
IFT20-206ENST00000578122 ST20-MTHFSA0A0A6YYL1 179 aa21.7■■□□□ 1.06
IFT20-206ENST00000578122 SRPK2P78362 688 aaKnown RBP21.7■■□□□ 1.06
IFT20-206ENST00000578122 DDX17Q92841 729 aaKnown RBP21.7■■□□□ 1.06
IFT20-206ENST00000578122 PHF8Q9UPP1 1060 aa21.7■■□□□ 1.06
IFT20-206ENST00000578122 SBNO2Q9Y2G9 1366 aa21.7■■□□□ 1.06
IFT20-206ENST00000578122 COL16A1Q07092 1604 aaPredicted RBP21.69■■□□□ 1.06
IFT20-206ENST00000578122 ITSN1Q15811 1721 aa21.69■■□□□ 1.06
IFT20-206ENST00000578122 CABP2Q9NPB3 220 aa21.68■■□□□ 1.06
IFT20-206ENST00000578122 ATP7BP35670 1465 aa21.68■■□□□ 1.06
IFT20-206ENST00000578122 FOXO3O43524 673 aa21.67■■□□□ 1.06
IFT20-206ENST00000578122 NPHP3Q7Z494 1330 aa21.66■■□□□ 1.06
IFT20-206ENST00000578122 PMFBP1Q8TBY8 1022 aa21.66■■□□□ 1.06
IFT20-206ENST00000578122 TESK2Q96S53 571 aa21.65■■□□□ 1.06
IFT20-206ENST00000578122 SPINK5Q9NQ38 1064 aaPredicted RBP21.65■■□□□ 1.06
IFT20-206ENST00000578122 CCDC61Q9Y6R9 512 aa21.65■■□□□ 1.06
IFT20-206ENST00000578122 TOPAZ1Q8N9V7 1692 aa21.65■■□□□ 1.06
IFT20-206ENST00000578122 CAPN15O75808 1086 aa21.64■■□□□ 1.05
IFT20-206ENST00000578122 SOS2Q07890 1332 aaPredicted RBP21.63■■□□□ 1.05
IFT20-206ENST00000578122 SLC24A1O60721 1099 aa21.63■■□□□ 1.05
IFT20-206ENST00000578122 XPCQ01831 940 aaPredicted RBP21.62■■□□□ 1.05
IFT20-206ENST00000578122 PXDNQ92626 1479 aa21.61■■□□□ 1.05
IFT20-206ENST00000578122 EIF4G2P78344 907 aaKnown RBP eCLIP21.61■■□□□ 1.05
IFT20-206ENST00000578122 NGDNQ8NEJ9 315 aaKnown RBP21.61■■□□□ 1.05
IFT20-206ENST00000578122 LRRC59Q96AG4 307 aaKnown RBP21.61■■□□□ 1.05
IFT20-206ENST00000578122 JCADQ9P266 1359 aa21.61■■□□□ 1.05
IFT20-206ENST00000578122 PLEKHG3A1L390 1219 aa21.6■■□□□ 1.05
IFT20-206ENST00000578122 PSME1Q06323 249 aa21.6■■□□□ 1.05
IFT20-206ENST00000578122 KRT28Q7Z3Y7 464 aa21.6■■□□□ 1.05
IFT20-206ENST00000578122 PPIP5K1Q6PFW1 1433 aa21.59■■□□□ 1.05
IFT20-206ENST00000578122 HSPA5P11021 654 aaKnown RBP21.58■■□□□ 1.05
IFT20-206ENST00000578122 ATAD2Q6PL18 1390 aa21.58■■□□□ 1.04
IFT20-206ENST00000578122 SHPRHQ149N8 1683 aa21.57■■□□□ 1.04
IFT20-206ENST00000578122 TMF1P82094 1093 aa21.57■■□□□ 1.04
IFT20-206ENST00000578122 PUS7Q96PZ0 661 aaKnown RBP21.57■■□□□ 1.04
IFT20-206ENST00000578122 ACEP12821 1306 aa21.56■■□□□ 1.04
IFT20-206ENST00000578122 CABP1Q9NZU7 370 aa21.56■■□□□ 1.04
IFT20-206ENST00000578122 POLR3AO14802 1390 aaPredicted RBP21.55■■□□□ 1.04
IFT20-206ENST00000578122 DISP3Q9P2K9 1392 aa21.54■■□□□ 1.04
IFT20-206ENST00000578122 SBNO1A3KN83 1393 aa21.53■■□□□ 1.04
IFT20-206ENST00000578122 PNPLA6Q8IY17 1366 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms