RNA–Protein interactions for RNA: ENST00000577706.1

TOP2A-203, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-203ENST00000577706 PRDM9Q9NQV7 894 aa9.12□□□□□ -0.95
TOP2A-203ENST00000577706 TULP1O00294 542 aaPredicted RBP9.11□□□□□ -0.95
TOP2A-203ENST00000577706 TTC24A2A3L6 582 aaPredicted RBP9.1□□□□□ -0.95
TOP2A-203ENST00000577706 GRIPAP1Q4V328 841 aa9.1□□□□□ -0.95
TOP2A-203ENST00000577706 PHOX2BQ99453 314 aa9.1□□□□□ -0.95
TOP2A-203ENST00000577706 C11orf95C9JLR9 678 aaPredicted RBP9.09□□□□□ -0.95
TOP2A-203ENST00000577706 MSS51Q4VC12 460 aa9.09□□□□□ -0.95
TOP2A-203ENST00000577706 GMPR2Q9P2T1 348 aaKnown RBP9.09□□□□□ -0.95
TOP2A-203ENST00000577706 SMCPP49901 116 aaPredicted RBP9.08□□□□□ -0.96
TOP2A-203ENST00000577706 RNF19BQ6ZMZ0 732 aa9.08□□□□□ -0.96
TOP2A-203ENST00000577706 WNT7AO00755 349 aa9.05□□□□□ -0.96
TOP2A-203ENST00000577706 WFS1O76024 890 aa9.05□□□□□ -0.96
TOP2A-203ENST00000577706 Q3C1V9 767 aa9.05□□□□□ -0.96
TOP2A-203ENST00000577706 SNIP1Q8TAD8 396 aaKnown RBP9.04□□□□□ -0.96
TOP2A-203ENST00000577706 TRIM32Q13049 653 aa9.03□□□□□ -0.96
TOP2A-203ENST00000577706 SMPD1P17405 629 aa9.02□□□□□ -0.97
TOP2A-203ENST00000577706 MMP16P51512 607 aa9.02□□□□□ -0.97
TOP2A-203ENST00000577706 STK17AQ9UEE5 414 aa9.01□□□□□ -0.97
TOP2A-203ENST00000577706 WIPF1O43516 503 aa9□□□□□ -0.97
TOP2A-203ENST00000577706 CD46P15529 392 aa9□□□□□ -0.97
TOP2A-203ENST00000577706 INSM1Q01101 510 aaPredicted RBP9□□□□□ -0.97
TOP2A-203ENST00000577706 NFX1Q12986 1120 aaKnown RBP9□□□□□ -0.97
TOP2A-203ENST00000577706 MRGPRX2Q96LB1 330 aa9□□□□□ -0.97
TOP2A-203ENST00000577706 USB1Q9BQ65 265 aaKnown RBP9□□□□□ -0.97
TOP2A-203ENST00000577706 J3QL48 77 aa8.99□□□□□ -0.97
TOP2A-203ENST00000577706 ATP13A2Q9NQ11 1180 aa8.99□□□□□ -0.97
TOP2A-203ENST00000577706 KDM4AO75164 1064 aa8.98□□□□□ -0.97
TOP2A-203ENST00000577706 DXOO77932 396 aaKnown RBP8.98□□□□□ -0.97
TOP2A-203ENST00000577706 ZC3H15Q8WU90 426 aaKnown RBP8.98□□□□□ -0.97
TOP2A-203ENST00000577706 REPIN1Q9BWE0 567 aaKnown RBP8.98□□□□□ -0.97
TOP2A-203ENST00000577706 IRF6O14896 467 aa8.97□□□□□ -0.97
TOP2A-203ENST00000577706 MAP2K5Q13163 448 aa8.97□□□□□ -0.97
TOP2A-203ENST00000577706 CCDC24Q8N4L8 307 aa8.97□□□□□ -0.97
TOP2A-203ENST00000577706 SENP2Q9HC62 589 aa8.97□□□□□ -0.97
TOP2A-203ENST00000577706 BCANQ96GW7 911 aa8.96□□□□□ -0.98
TOP2A-203ENST00000577706 ZMYND10O75800 440 aa8.95□□□□□ -0.98
TOP2A-203ENST00000577706 SNRPBP14678 240 aaKnown RBP8.95□□□□□ -0.98
TOP2A-203ENST00000577706 USP46P62068 366 aa8.95□□□□□ -0.98
TOP2A-203ENST00000577706 HPS1Q92902 700 aa8.95□□□□□ -0.98
TOP2A-203ENST00000577706 TRIM47Q96LD4 638 aa8.95□□□□□ -0.98
TOP2A-203ENST00000577706 MINK1Q8N4C8 1332 aaPredicted RBP8.95□□□□□ -0.98
TOP2A-203ENST00000577706 RC3H1Q5TC82 1133 aaKnown RBP8.94□□□□□ -0.98
TOP2A-203ENST00000577706 BARGINQ6ZT62 677 aa8.94□□□□□ -0.98
TOP2A-203ENST00000577706 WNT7BP56706 349 aa8.93□□□□□ -0.98
TOP2A-203ENST00000577706 KRI1Q8N9T8 703 aaKnown RBP8.93□□□□□ -0.98
TOP2A-203ENST00000577706 HLA-CQ95604 372 aa8.93□□□□□ -0.98
TOP2A-203ENST00000577706 TERTO14746 1132 aaKnown RBP8.92□□□□□ -0.98
TOP2A-203ENST00000577706 SKOR1P84550 965 aa8.92□□□□□ -0.98
TOP2A-203ENST00000577706 MDM2Q00987 491 aaPredicted RBP8.92□□□□□ -0.98
TOP2A-203ENST00000577706 CCDC102AQ96A19 550 aa8.92□□□□□ -0.98
TOP2A-203ENST00000577706 KIFC2Q96AC6 838 aa8.92□□□□□ -0.98
TOP2A-203ENST00000577706 HOXA2O43364 376 aa8.91□□□□□ -0.98
TOP2A-203ENST00000577706 ALDH1A1P00352 501 aa8.88□□□□□ -0.99
TOP2A-203ENST00000577706 JUNDP17535 347 aa8.88□□□□□ -0.99
TOP2A-203ENST00000577706 GUCA2AQ02747 115 aa8.88□□□□□ -0.99
TOP2A-203ENST00000577706 LCE2CQ5TA81 110 aa8.87□□□□□ -0.99
TOP2A-203ENST00000577706 SYMPKQ92797 1274 aaKnown RBP8.87□□□□□ -0.99
TOP2A-203ENST00000577706 FAM181BA6NEQ2 426 aa8.85□□□□□ -0.99
TOP2A-203ENST00000577706 NUDT12Q9BQG2 462 aa8.85□□□□□ -0.99
TOP2A-203ENST00000577706 GPCPD1Q9NPB8 672 aa8.85□□□□□ -0.99
TOP2A-203ENST00000577706 CLCN1P35523 988 aa8.84□□□□□ -0.99
TOP2A-203ENST00000577706 PTCRAQ6ISU1 281 aaPredicted RBP8.84□□□□□ -0.99
TOP2A-203ENST00000577706 RETREG3Q86VR2 466 aa8.84□□□□□ -0.99
TOP2A-203ENST00000577706 NUTM1Q86Y26 1132 aa8.84□□□□□ -0.99
TOP2A-203ENST00000577706 EHBP1Q8NDI1 1231 aa8.84□□□□□ -0.99
TOP2A-203ENST00000577706 SLC16A10Q8TF71 515 aa8.84□□□□□ -0.99
TOP2A-203ENST00000577706 FAM217BQ9NTX9 383 aaPredicted RBP8.84□□□□□ -0.99
TOP2A-203ENST00000577706 SIAH2O43255 324 aa8.83□□□□□ -1
TOP2A-203ENST00000577706 WASF2Q9Y6W5 498 aa8.82□□□□□ -1
TOP2A-203ENST00000577706 CAPN5O15484 640 aaPredicted RBP8.81□□□□□ -1
TOP2A-203ENST00000577706 SLC24A3Q9HC58 644 aa8.81□□□□□ -1
TOP2A-203ENST00000577706 NXF1Q9UBU9 619 aaKnown RBP8.81□□□□□ -1
TOP2A-203ENST00000577706 TRIM66O15016 1216 aa8.8□□□□□ -1
TOP2A-203ENST00000577706 NPAS3Q8IXF0 933 aa8.8□□□□□ -1
TOP2A-203ENST00000577706 AK7Q96M32 723 aa8.8□□□□□ -1
TOP2A-203ENST00000577706 C6orf229H3BNL8 230 aa8.79□□□□□ -1
TOP2A-203ENST00000577706 FDX1P10109 184 aa8.79□□□□□ -1
TOP2A-203ENST00000577706 MS4A1P11836 297 aa8.79□□□□□ -1
TOP2A-203ENST00000577706 BMP1P13497 986 aa8.79□□□□□ -1
TOP2A-203ENST00000577706 SH3BP2P78314 561 aa8.79□□□□□ -1
TOP2A-203ENST00000577706 CCNYL3P0C7X3 344 aa8.78□□□□□ -1
TOP2A-203ENST00000577706 TRIM46Q7Z4K8 759 aa8.78□□□□□ -1
TOP2A-203ENST00000577706 PCDHGC3Q9UN70 934 aa8.78□□□□□ -1
TOP2A-203ENST00000577706 AMHR2Q16671 573 aa8.77□□□□□ -1.01
TOP2A-203ENST00000577706 IRF7Q92985 503 aa8.76□□□□□ -1.01
TOP2A-203ENST00000577706 SSTR3P32745 418 aaPredicted RBP8.75□□□□□ -1.01
TOP2A-203ENST00000577706 GMPRP36959 345 aa8.75□□□□□ -1.01
TOP2A-203ENST00000577706 PTPRNQ16849 979 aa8.75□□□□□ -1.01
TOP2A-203ENST00000577706 EVA1BQ9NVM1 165 aa8.75□□□□□ -1.01
TOP2A-203ENST00000577706 TTLL12Q14166 644 aaPredicted RBP8.74□□□□□ -1.01
TOP2A-203ENST00000577706 UNC93B1Q9H1C4 597 aa8.74□□□□□ -1.01
TOP2A-203ENST00000577706 LINC01559Q495D7 138 aa8.73□□□□□ -1.01
TOP2A-203ENST00000577706 GIGYF2Q6Y7W6 1299 aaKnown RBP8.73□□□□□ -1.01
TOP2A-203ENST00000577706 SPIRE2Q8WWL2 714 aa8.73□□□□□ -1.01
TOP2A-203ENST00000577706 BAP1Q92560 729 aa8.73□□□□□ -1.01
TOP2A-203ENST00000577706 PLEKHG3A1L390 1219 aa8.72□□□□□ -1.01
TOP2A-203ENST00000577706 VEGFBP49765 207 aa8.72□□□□□ -1.01
TOP2A-203ENST00000577706 KCNH2Q12809 1159 aa8.72□□□□□ -1.01
TOP2A-203ENST00000577706 PARP9Q8IXQ6 854 aa8.72□□□□□ -1.01
TOP2A-203ENST00000577706 ZSCAN1Q8NBB4 408 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 316 ms