RNA–Protein interactions for RNA: ENST00000575770.5

ABR-232, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 5

Gene ABR, Length 618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-232ENST00000575770 ATF3P18847 181 aa9.39□□□□□ -0.91
ABR-232ENST00000575770 CADPS2Q86UW7 1296 aa9.39□□□□□ -0.91
ABR-232ENST00000575770 TRAK1Q9UPV9 953 aa9.39□□□□□ -0.91
ABR-232ENST00000575770 SLC24A1O60721 1099 aa9.38□□□□□ -0.91
ABR-232ENST00000575770 NBPF8Q3BBV2 869 aa9.38□□□□□ -0.91
ABR-232ENST00000575770 PRAM1Q96QH2 718 aa9.38□□□□□ -0.91
ABR-232ENST00000575770 CENPJQ9HC77 1338 aaPredicted RBP9.37□□□□□ -0.91
ABR-232ENST00000575770 ZEB1P37275 1124 aaPredicted RBP9.37□□□□□ -0.91
ABR-232ENST00000575770 NBPF1Q3BBV0 1214 aa9.37□□□□□ -0.91
ABR-232ENST00000575770 ITSN1Q15811 1721 aa9.36□□□□□ -0.91
ABR-232ENST00000575770 UBAP1LF5GYI3 381 aa9.36□□□□□ -0.91
ABR-232ENST00000575770 FMN2Q9NZ56 1722 aa9.36□□□□□ -0.91
ABR-232ENST00000575770 SAFB2Q14151 953 aaKnown RBP eCLIP9.35□□□□□ -0.91
ABR-232ENST00000575770 WAPLQ7Z5K2 1190 aa9.35□□□□□ -0.91
ABR-232ENST00000575770 USP47Q96K76 1375 aa9.35□□□□□ -0.91
ABR-232ENST00000575770 SBNO2Q9Y2G9 1366 aa9.35□□□□□ -0.91
ABR-232ENST00000575770 RBM33Q96EV2 1170 aaKnown RBP9.34□□□□□ -0.91
ABR-232ENST00000575770 PLEKHH1Q9ULM0 1364 aa9.34□□□□□ -0.91
ABR-232ENST00000575770 MINK1Q8N4C8 1332 aaPredicted RBP9.33□□□□□ -0.92
ABR-232ENST00000575770 SCAF1Q9H7N4 1312 aaKnown RBP9.33□□□□□ -0.92
ABR-232ENST00000575770 KIF1AQ12756 1690 aa9.33□□□□□ -0.92
ABR-232ENST00000575770 ANKARQ7Z5J8 1434 aa9.33□□□□□ -0.92
ABR-232ENST00000575770 FBXO41Q8TF61 875 aa9.33□□□□□ -0.92
ABR-232ENST00000575770 ROBO1Q9Y6N7 1651 aa9.32□□□□□ -0.92
ABR-232ENST00000575770 EVC2Q86UK5 1308 aa9.32□□□□□ -0.92
ABR-232ENST00000575770 TULP4Q9NRJ4 1543 aa9.32□□□□□ -0.92
ABR-232ENST00000575770 SLAIN2Q9P270 581 aa9.32□□□□□ -0.92
ABR-232ENST00000575770 MST1RQ04912 1400 aa9.31□□□□□ -0.92
ABR-232ENST00000575770 EIF4G2P78344 907 aaKnown RBP eCLIP9.31□□□□□ -0.92
ABR-232ENST00000575770 RGPD8O14715 1765 aaPredicted RBP9.3□□□□□ -0.92
ABR-232ENST00000575770 C1orf167Q5SNV9 1468 aa9.3□□□□□ -0.92
ABR-232ENST00000575770 WASLO00401 505 aaPredicted RBP9.3□□□□□ -0.92
ABR-232ENST00000575770 PIP4K2BP78356 416 aa9.3□□□□□ -0.92
ABR-232ENST00000575770 CDCA8Q53HL2 280 aa9.3□□□□□ -0.92
ABR-232ENST00000575770 HIRIP3Q9BW71 556 aaPredicted RBP9.3□□□□□ -0.92
ABR-232ENST00000575770 ATAD2Q6PL18 1390 aa9.29□□□□□ -0.92
ABR-232ENST00000575770 PHLPP1O60346 1717 aa9.29□□□□□ -0.92
ABR-232ENST00000575770 SRPK2P78362 688 aaKnown RBP9.29□□□□□ -0.92
ABR-232ENST00000575770 TOPAZ1Q8N9V7 1692 aa9.29□□□□□ -0.92
ABR-232ENST00000575770 NHSL1Q5SYE7 1610 aa9.28□□□□□ -0.92
ABR-232ENST00000575770 AHDC1Q5TGY3 1603 aaPredicted RBP9.28□□□□□ -0.92
ABR-232ENST00000575770 ST20-MTHFSA0A0A6YYL1 179 aa9.28□□□□□ -0.92
ABR-232ENST00000575770 TMF1P82094 1093 aa9.28□□□□□ -0.92
ABR-232ENST00000575770 ATP7BP35670 1465 aa9.28□□□□□ -0.92
ABR-232ENST00000575770 USP32Q8NFA0 1604 aa9.27□□□□□ -0.92
ABR-232ENST00000575770 NINLQ9Y2I6 1382 aa9.27□□□□□ -0.93
ABR-232ENST00000575770 ESCO1Q5FWF5 840 aa9.27□□□□□ -0.93
ABR-232ENST00000575770 PUS7Q96PZ0 661 aaKnown RBP9.27□□□□□ -0.93
ABR-232ENST00000575770 CDK19Q9BWU1 502 aa9.27□□□□□ -0.93
ABR-232ENST00000575770 NPHP3Q7Z494 1330 aa9.27□□□□□ -0.93
ABR-232ENST00000575770 BRINP3Q76B58 766 aa9.26□□□□□ -0.93
ABR-232ENST00000575770 CCDC61Q9Y6R9 512 aa9.26□□□□□ -0.93
ABR-232ENST00000575770 NUTM2FA1L443 756 aa9.25□□□□□ -0.93
ABR-232ENST00000575770 NUDT16Q96DE0 195 aaKnown RBP9.25□□□□□ -0.93
ABR-232ENST00000575770 PHF8Q9UPP1 1060 aa9.25□□□□□ -0.93
ABR-232ENST00000575770 PPIP5K1Q6PFW1 1433 aa9.24□□□□□ -0.93
ABR-232ENST00000575770 HSPA5P11021 654 aaKnown RBP9.24□□□□□ -0.93
ABR-232ENST00000575770 NGDNQ8NEJ9 315 aaKnown RBP9.24□□□□□ -0.93
ABR-232ENST00000575770 TESK2Q96S53 571 aa9.24□□□□□ -0.93
ABR-232ENST00000575770 COL16A1Q07092 1604 aaPredicted RBP9.23□□□□□ -0.93
ABR-232ENST00000575770 AKAP12Q02952 1782 aa9.23□□□□□ -0.93
ABR-232ENST00000575770 PSME1Q06323 249 aa9.23□□□□□ -0.93
ABR-232ENST00000575770 ORAI2Q96SN7 254 aa9.23□□□□□ -0.93
ABR-232ENST00000575770 CABP2Q9NPB3 220 aa9.23□□□□□ -0.93
ABR-232ENST00000575770 BRD4O60885 1362 aaPredicted RBP9.23□□□□□ -0.93
ABR-232ENST00000575770 PRR36Q9H6K5 1346 aa9.22□□□□□ -0.93
ABR-232ENST00000575770 SHPRHQ149N8 1683 aa9.22□□□□□ -0.93
ABR-232ENST00000575770 POLR3AO14802 1390 aaPredicted RBP9.22□□□□□ -0.93
ABR-232ENST00000575770 PLEKHG3A1L390 1219 aa9.21□□□□□ -0.94
ABR-232ENST00000575770 FOXO3O43524 673 aa9.21□□□□□ -0.94
ABR-232ENST00000575770 HDGFL2Q7Z4V5 671 aaPredicted RBP9.21□□□□□ -0.94
ABR-232ENST00000575770 LRRC59Q96AG4 307 aaKnown RBP9.21□□□□□ -0.94
ABR-232ENST00000575770 TERF2IPQ9NYB0 399 aa9.21□□□□□ -0.94
ABR-232ENST00000575770 ARHGEF10O15013 1369 aa9.21□□□□□ -0.94
ABR-232ENST00000575770 DISP3Q9P2K9 1392 aa9.21□□□□□ -0.94
ABR-232ENST00000575770 PXDNQ92626 1479 aa9.21□□□□□ -0.94
ABR-232ENST00000575770 MON2Q7Z3U7 1717 aa9.2□□□□□ -0.94
ABR-232ENST00000575770 HSPA1LP34931 641 aa9.2□□□□□ -0.94
ABR-232ENST00000575770 PMFBP1Q8TBY8 1022 aa9.2□□□□□ -0.94
ABR-232ENST00000575770 TMC1Q8TDI8 760 aa9.2□□□□□ -0.94
ABR-232ENST00000575770 ZNF692Q9BU19 519 aaPredicted RBP9.2□□□□□ -0.94
ABR-232ENST00000575770 SOS2Q07890 1332 aaPredicted RBP9.2□□□□□ -0.94
ABR-232ENST00000575770 SBNO1A3KN83 1393 aa9.2□□□□□ -0.94
ABR-232ENST00000575770 JCADQ9P266 1359 aa9.2□□□□□ -0.94
ABR-232ENST00000575770 MYOM1P52179 1685 aa9.2□□□□□ -0.94
ABR-232ENST00000575770 TRPM3Q9HCF6 1732 aaPredicted RBP9.19□□□□□ -0.94
ABR-232ENST00000575770 KRT28Q7Z3Y7 464 aa9.19□□□□□ -0.94
ABR-232ENST00000575770 ILDR1Q86SU0 546 aaPredicted RBP9.19□□□□□ -0.94
ABR-232ENST00000575770 CABP1Q9NZU7 370 aa9.19□□□□□ -0.94
ABR-232ENST00000575770 ACEP12821 1306 aa9.19□□□□□ -0.94
ABR-232ENST00000575770 TNS3Q68CZ2 1445 aa9.19□□□□□ -0.94
ABR-232ENST00000575770 USP6P35125 1406 aa9.18□□□□□ -0.94
ABR-232ENST00000575770 KTN1Q86UP2 1357 aaKnown RBP9.18□□□□□ -0.94
ABR-232ENST00000575770 ANKRD36BQ8N2N9 1353 aa9.18□□□□□ -0.94
ABR-232ENST00000575770 COL22A1Q8NFW1 1626 aaPredicted RBP9.18□□□□□ -0.94
ABR-232ENST00000575770 ALS2Q96Q42 1657 aa9.18□□□□□ -0.94
ABR-232ENST00000575770 POLR3GLQ9BT43 218 aa9.18□□□□□ -0.94
ABR-232ENST00000575770 NRKQ7Z2Y5 1582 aa9.17□□□□□ -0.94
ABR-232ENST00000575770 CPSF1Q10570 1443 aaKnown RBP9.17□□□□□ -0.94
ABR-232ENST00000575770 EDC4Q6P2E9 1401 aaKnown RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms