RNA–Protein interactions for RNA: ENST00000574728.1

PRPF8-211, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-211ENST00000574728 POLR3EQ9NVU0 708 aa8.44□□□□□ -1.06
PRPF8-211ENST00000574728 TSR3Q9UJK0 312 aaKnown RBP8.44□□□□□ -1.06
PRPF8-211ENST00000574728 HPS5Q9UPZ3 1129 aa8.44□□□□□ -1.06
PRPF8-211ENST00000574728 POLA1P09884 1462 aaPredicted RBP8.44□□□□□ -1.06
PRPF8-211ENST00000574728 IFT140Q96RY7 1462 aa8.44□□□□□ -1.06
PRPF8-211ENST00000574728 GRIPAP1Q4V328 841 aa8.43□□□□□ -1.06
PRPF8-211ENST00000574728 PCDH10Q9P2E7 1040 aa8.43□□□□□ -1.06
PRPF8-211ENST00000574728 RIC3Q7Z5B4 369 aa8.42□□□□□ -1.06
PRPF8-211ENST00000574728 KCTD12Q96CX2 325 aaKnown RBP8.42□□□□□ -1.06
PRPF8-211ENST00000574728 TARBP1Q13395 1621 aaKnown RBP8.42□□□□□ -1.06
PRPF8-211ENST00000574728 MOXD2PA6NHM9 499 aa8.41□□□□□ -1.06
PRPF8-211ENST00000574728 HOXA2O43364 376 aa8.41□□□□□ -1.06
PRPF8-211ENST00000574728 GJA5P36382 358 aa8.41□□□□□ -1.06
PRPF8-211ENST00000574728 RSBN1LQ6PCB5 846 aaPredicted RBP8.41□□□□□ -1.06
PRPF8-211ENST00000574728 THSD4Q6ZMP0 1018 aa8.41□□□□□ -1.06
PRPF8-211ENST00000574728 RAD54L2Q9Y4B4 1467 aa8.4□□□□□ -1.06
PRPF8-211ENST00000574728 SPTLC1O15269 473 aa8.4□□□□□ -1.06
PRPF8-211ENST00000574728 ACTN4O43707 911 aaKnown RBP8.4□□□□□ -1.06
PRPF8-211ENST00000574728 FUT2Q10981 343 aa8.4□□□□□ -1.06
PRPF8-211ENST00000574728 FGD5Q6ZNL6 1462 aa8.39□□□□□ -1.07
PRPF8-211ENST00000574728 NDUFV2P19404 249 aa8.39□□□□□ -1.07
PRPF8-211ENST00000574728 ATP6V1AP38606 617 aa8.39□□□□□ -1.07
PRPF8-211ENST00000574728 TUSC1Q2TAM9 212 aa8.39□□□□□ -1.07
PRPF8-211ENST00000574728 PROCA1Q8NCQ7 364 aaPredicted RBP8.39□□□□□ -1.07
PRPF8-211ENST00000574728 LIMD1Q9UGP4 676 aa8.39□□□□□ -1.07
PRPF8-211ENST00000574728 FDX1P10109 184 aa8.38□□□□□ -1.07
PRPF8-211ENST00000574728 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.38□□□□□ -1.07
PRPF8-211ENST00000574728 WBP1LQ9NX94 342 aa8.38□□□□□ -1.07
PRPF8-211ENST00000574728 MYT1LQ9UL68 1186 aa8.38□□□□□ -1.07
PRPF8-211ENST00000574728 AQRO60306 1485 aaKnown RBP eCLIP8.38□□□□□ -1.07
PRPF8-211ENST00000574728 SOGA1O94964 1423 aa8.37□□□□□ -1.07
PRPF8-211ENST00000574728 APLP1P51693 650 aa8.36□□□□□ -1.07
PRPF8-211ENST00000574728 CSPP1Q1MSJ5 1256 aa8.36□□□□□ -1.07
PRPF8-211ENST00000574728 NYAP1Q6ZVC0 841 aa8.36□□□□□ -1.07
PRPF8-211ENST00000574728 EIF4G3O43432 1585 aaKnown RBP8.35□□□□□ -1.07
PRPF8-211ENST00000574728 PRPF38BQ5VTL8 546 aaKnown RBP8.35□□□□□ -1.07
PRPF8-211ENST00000574728 PCDHB3Q9Y5E6 796 aa8.35□□□□□ -1.07
PRPF8-211ENST00000574728 SYNJ1O43426 1573 aa8.35□□□□□ -1.07
PRPF8-211ENST00000574728 TDRD9Q8NDG6 1382 aaKnown RBP8.35□□□□□ -1.07
PRPF8-211ENST00000574728 PTPN5P54829 565 aa8.34□□□□□ -1.07
PRPF8-211ENST00000574728 GUCA2AQ02747 115 aa8.34□□□□□ -1.07
PRPF8-211ENST00000574728 PUS10Q3MIT2 529 aaKnown RBP8.34□□□□□ -1.07
PRPF8-211ENST00000574728 MORN1Q5T089 497 aa8.34□□□□□ -1.07
PRPF8-211ENST00000574728 HLA-CQ95604 372 aa8.34□□□□□ -1.07
PRPF8-211ENST00000574728 PCDHB15Q9Y5E8 787 aa8.34□□□□□ -1.07
PRPF8-211ENST00000574728 LILRB3O75022 631 aa8.33□□□□□ -1.08
PRPF8-211ENST00000574728 WRNQ14191 1432 aaPredicted RBP eCLIP8.33□□□□□ -1.08
PRPF8-211ENST00000574728 PPP2R2DQ66LE6 453 aa8.33□□□□□ -1.08
PRPF8-211ENST00000574728 ERICH6Q7L0X2 663 aa8.33□□□□□ -1.08
PRPF8-211ENST00000574728 ZBTB3Q9H5J0 574 aa8.33□□□□□ -1.08
PRPF8-211ENST00000574728 ABCA10Q8WWZ4 1543 aa8.33□□□□□ -1.08
PRPF8-211ENST00000574728 TOP2BQ02880 1626 aa8.32□□□□□ -1.08
PRPF8-211ENST00000574728 NUTM2BA6NNL0 878 aaPredicted RBP8.32□□□□□ -1.08
PRPF8-211ENST00000574728 NUTM2EB1AL46 878 aaPredicted RBP8.32□□□□□ -1.08
PRPF8-211ENST00000574728 Q3C1V9 767 aa8.32□□□□□ -1.08
PRPF8-211ENST00000574728 NUTM2DQ5VT03 806 aaPredicted RBP8.32□□□□□ -1.08
PRPF8-211ENST00000574728 NUTM2AQ8IVF1 878 aaPredicted RBP8.32□□□□□ -1.08
PRPF8-211ENST00000574728 PCDHGC3Q9UN70 934 aa8.32□□□□□ -1.08
PRPF8-211ENST00000574728 WDR97A6NE52 1622 aa8.32□□□□□ -1.08
PRPF8-211ENST00000574728 BIVM-ERCC5R4GMW8 1640 aa8.32□□□□□ -1.08
PRPF8-211ENST00000574728 SPDYE5A6NIY4 337 aa8.31□□□□□ -1.08
PRPF8-211ENST00000574728 NR1I2O75469 434 aa8.31□□□□□ -1.08
PRPF8-211ENST00000574728 RFC5P40937 340 aa8.31□□□□□ -1.08
PRPF8-211ENST00000574728 MTMR2Q13614 643 aa8.31□□□□□ -1.08
PRPF8-211ENST00000574728 QPCTQ16769 361 aa8.31□□□□□ -1.08
PRPF8-211ENST00000574728 SPNS2Q8IVW8 549 aa8.31□□□□□ -1.08
PRPF8-211ENST00000574728 SLC27A5Q9Y2P5 690 aa8.31□□□□□ -1.08
PRPF8-211ENST00000574728 C6orf229H3BNL8 230 aa8.3□□□□□ -1.08
PRPF8-211ENST00000574728 HRCP23327 699 aa8.3□□□□□ -1.08
PRPF8-211ENST00000574728 CABLES1Q8TDN4 633 aa8.3□□□□□ -1.08
PRPF8-211ENST00000574728 RNF166Q96A37 237 aaPredicted RBP8.3□□□□□ -1.08
PRPF8-211ENST00000574728 FLIIQ13045 1269 aa8.29□□□□□ -1.08
PRPF8-211ENST00000574728 TMEM259Q4ZIN3 620 aa8.29□□□□□ -1.08
PRPF8-211ENST00000574728 BLOC1S3Q6QNY0 202 aa8.29□□□□□ -1.08
PRPF8-211ENST00000574728 ABCA5Q8WWZ7 1642 aa8.29□□□□□ -1.08
PRPF8-211ENST00000574728 RTL5Q5HYW3 569 aaPredicted RBP8.28□□□□□ -1.08
PRPF8-211ENST00000574728 SCUBE3Q8IX30 993 aa8.28□□□□□ -1.08
PRPF8-211ENST00000574728 SALL2Q9Y467 1007 aaPredicted RBP8.28□□□□□ -1.08
PRPF8-211ENST00000574728 GRIN2BQ13224 1484 aa8.27□□□□□ -1.09
PRPF8-211ENST00000574728 SNAPC4Q5SXM2 1469 aa8.27□□□□□ -1.09
PRPF8-211ENST00000574728 COPS2P61201 443 aa8.27□□□□□ -1.09
PRPF8-211ENST00000574728 FBXO31Q5XUX0 539 aaPredicted RBP8.27□□□□□ -1.09
PRPF8-211ENST00000574728 HCSTQ9UBK5 93 aa8.27□□□□□ -1.09
PRPF8-211ENST00000574728 GAPVD1Q14C86 1478 aa8.26□□□□□ -1.09
PRPF8-211ENST00000574728 FMNL1O95466 1100 aaPredicted RBP8.26□□□□□ -1.09
PRPF8-211ENST00000574728 C14orf37Q86TY3 774 aa8.26□□□□□ -1.09
PRPF8-211ENST00000574728 RETREG3Q86VR2 466 aa8.26□□□□□ -1.09
PRPF8-211ENST00000574728 BANK1Q8NDB2 785 aa8.26□□□□□ -1.09
PRPF8-211ENST00000574728 SYMPKQ92797 1274 aaKnown RBP8.26□□□□□ -1.09
PRPF8-211ENST00000574728 MAGI1Q96QZ7 1491 aaPredicted RBP8.26□□□□□ -1.09
PRPF8-211ENST00000574728 AP1G2O75843 785 aa8.25□□□□□ -1.09
PRPF8-211ENST00000574728 BRICD5Q6PL45 260 aa8.25□□□□□ -1.09
PRPF8-211ENST00000574728 RNF19BQ6ZMZ0 732 aa8.25□□□□□ -1.09
PRPF8-211ENST00000574728 HELBQ8NG08 1087 aaPredicted RBP8.25□□□□□ -1.09
PRPF8-211ENST00000574728 MTRQ99707 1265 aa8.25□□□□□ -1.09
PRPF8-211ENST00000574728 PLSCR2Q9NRY7 297 aa8.25□□□□□ -1.09
PRPF8-211ENST00000574728 PRR7Q8TB68 274 aa8.24□□□□□ -1.09
PRPF8-211ENST00000574728 USB1Q9BQ65 265 aaKnown RBP8.24□□□□□ -1.09
PRPF8-211ENST00000574728 IL21Q9HBE4 155 aa8.24□□□□□ -1.09
PRPF8-211ENST00000574728 ZPR1O75312 459 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms