RNA–Protein interactions for RNA: ENST00000573667.1

ABR-222, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4

Gene ABR, Length 560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-222ENST00000573667 FMN2Q9NZ56 1722 aa17.4■□□□□ 0.38
ABR-222ENST00000573667 RGPD8O14715 1765 aaPredicted RBP17.39■□□□□ 0.37
ABR-222ENST00000573667 WAPLQ7Z5K2 1190 aa17.39■□□□□ 0.37
ABR-222ENST00000573667 SPATA31A6Q5VVP1 1343 aa17.38■□□□□ 0.37
ABR-222ENST00000573667 LRRC59Q96AG4 307 aaKnown RBP17.36■□□□□ 0.37
ABR-222ENST00000573667 SIRT1Q96EB6 747 aa17.36■□□□□ 0.37
ABR-222ENST00000573667 PLEKHH1Q9ULM0 1364 aa17.36■□□□□ 0.37
ABR-222ENST00000573667 DLC1Q96QB1 1528 aa17.36■□□□□ 0.37
ABR-222ENST00000573667 KIAA1210Q9ULL0 1709 aa17.35■□□□□ 0.37
ABR-222ENST00000573667 SOCS7O14512 581 aa17.35■□□□□ 0.37
ABR-222ENST00000573667 ADGRB1O14514 1584 aa17.35■□□□□ 0.37
ABR-222ENST00000573667 KIF1AQ12756 1690 aa17.35■□□□□ 0.37
ABR-222ENST00000573667 MEX3CQ5U5Q3 659 aaKnown RBP17.34■□□□□ 0.37
ABR-222ENST00000573667 ORAI2Q96SN7 254 aa17.34■□□□□ 0.37
ABR-222ENST00000573667 ARHGEF28Q8N1W1 1705 aaKnown RBP17.33■□□□□ 0.37
ABR-222ENST00000573667 ESCO1Q5FWF5 840 aa17.33■□□□□ 0.36
ABR-222ENST00000573667 DDX17Q92841 729 aaKnown RBP17.33■□□□□ 0.36
ABR-222ENST00000573667 POGKQ9P215 609 aa17.33■□□□□ 0.36
ABR-222ENST00000573667 PRAM1Q96QH2 718 aa17.32■□□□□ 0.36
ABR-222ENST00000573667 LRP6O75581 1613 aa17.32■□□□□ 0.36
ABR-222ENST00000573667 NUTM2FA1L443 756 aa17.31■□□□□ 0.36
ABR-222ENST00000573667 TRAK1Q9UPV9 953 aa17.31■□□□□ 0.36
ABR-222ENST00000573667 SAFB2Q14151 953 aaKnown RBP eCLIP17.3■□□□□ 0.36
ABR-222ENST00000573667 ADGRB2O60241 1585 aa17.3■□□□□ 0.36
ABR-222ENST00000573667 NPHP3Q7Z494 1330 aa17.29■□□□□ 0.36
ABR-222ENST00000573667 NUTM2BA6NNL0 878 aaPredicted RBP17.29■□□□□ 0.36
ABR-222ENST00000573667 NUTM2EB1AL46 878 aaPredicted RBP17.29■□□□□ 0.36
ABR-222ENST00000573667 NUTM2AQ8IVF1 878 aaPredicted RBP17.29■□□□□ 0.36
ABR-222ENST00000573667 RGS17Q9UGC6 210 aaPredicted RBP17.29■□□□□ 0.36
ABR-222ENST00000573667 SOS2Q07890 1332 aaPredicted RBP17.28■□□□□ 0.36
ABR-222ENST00000573667 PNPLA6Q8IY17 1366 aa17.28■□□□□ 0.36
ABR-222ENST00000573667 COL22A1Q8NFW1 1626 aaPredicted RBP17.27■□□□□ 0.36
ABR-222ENST00000573667 TRIM26Q12899 539 aaPredicted RBP17.26■□□□□ 0.35
ABR-222ENST00000573667 ITSN1Q15811 1721 aa17.26■□□□□ 0.35
ABR-222ENST00000573667 MARF1Q9Y4F3 1742 aaKnown RBP17.26■□□□□ 0.35
ABR-222ENST00000573667 FOXO3O43524 673 aa17.25■□□□□ 0.35
ABR-222ENST00000573667 USP32Q8NFA0 1604 aa17.25■□□□□ 0.35
ABR-222ENST00000573667 PXDNQ92626 1479 aa17.24■□□□□ 0.35
ABR-222ENST00000573667 ZNF772Q68DY9 489 aaPredicted RBP17.23■□□□□ 0.35
ABR-222ENST00000573667 EIF3AQ14152 1382 aaKnown RBP17.23■□□□□ 0.35
ABR-222ENST00000573667 MINK1Q8N4C8 1332 aaPredicted RBP17.22■□□□□ 0.35
ABR-222ENST00000573667 ANKARQ7Z5J8 1434 aa17.22■□□□□ 0.35
ABR-222ENST00000573667 NEUROD1Q13562 356 aa17.22■□□□□ 0.35
ABR-222ENST00000573667 POTEAQ6S8J7 498 aa17.22■□□□□ 0.35
ABR-222ENST00000573667 SIN3AQ96ST3 1273 aa17.22■□□□□ 0.35
ABR-222ENST00000573667 HIRIP3Q9BW71 556 aaPredicted RBP17.22■□□□□ 0.35
ABR-222ENST00000573667 XPCQ01831 940 aaPredicted RBP17.21■□□□□ 0.35
ABR-222ENST00000573667 PHF8Q9UPP1 1060 aa17.21■□□□□ 0.35
ABR-222ENST00000573667 TRPM1Q7Z4N2 1603 aa17.21■□□□□ 0.35
ABR-222ENST00000573667 TULP4Q9NRJ4 1543 aa17.21■□□□□ 0.34
ABR-222ENST00000573667 L3MBTL2Q969R5 705 aa17.19■□□□□ 0.34
ABR-222ENST00000573667 C8orf37Q96NL8 207 aa17.19■□□□□ 0.34
ABR-222ENST00000573667 QRICH2Q9H0J4 1663 aa17.19■□□□□ 0.34
ABR-222ENST00000573667 ADAMTS2O95450 1211 aa17.18■□□□□ 0.34
ABR-222ENST00000573667 PSME1Q06323 249 aa17.18■□□□□ 0.34
ABR-222ENST00000573667 AFF2P51816 1311 aa17.18■□□□□ 0.34
ABR-222ENST00000573667 WASLO00401 505 aaPredicted RBP17.17■□□□□ 0.34
ABR-222ENST00000573667 KRT28Q7Z3Y7 464 aa17.17■□□□□ 0.34
ABR-222ENST00000573667 NBPF1Q3BBV0 1214 aa17.16■□□□□ 0.34
ABR-222ENST00000573667 PMFBP1Q8TBY8 1022 aa17.15■□□□□ 0.34
ABR-222ENST00000573667 NGLY1Q96IV0 654 aa17.15■□□□□ 0.34
ABR-222ENST00000573667 SPATA31A3Q5VYP0 1347 aa17.15■□□□□ 0.34
ABR-222ENST00000573667 ABCA3Q99758 1704 aa17.14■□□□□ 0.33
ABR-222ENST00000573667 TRPM3Q9HCF6 1732 aaPredicted RBP17.14■□□□□ 0.33
ABR-222ENST00000573667 TOPAZ1Q8N9V7 1692 aa17.13■□□□□ 0.33
ABR-222ENST00000573667 TNS3Q68CZ2 1445 aa17.13■□□□□ 0.33
ABR-222ENST00000573667 RXRBP28702 533 aa17.12■□□□□ 0.33
ABR-222ENST00000573667 SBNO1A3KN83 1393 aa17.12■□□□□ 0.33
ABR-222ENST00000573667 GPRASP1Q5JY77 1395 aa17.12■□□□□ 0.33
ABR-222ENST00000573667 ALS2Q96Q42 1657 aa17.11■□□□□ 0.33
ABR-222ENST00000573667 HAP1P54257 671 aaPredicted RBP17.11■□□□□ 0.33
ABR-222ENST00000573667 LMOD2Q6P5Q4 547 aa17.11■□□□□ 0.33
ABR-222ENST00000573667 PRR36Q9H6K5 1346 aa17.11■□□□□ 0.33
ABR-222ENST00000573667 TONSLQ96HA7 1378 aa17.11■□□□□ 0.33
ABR-222ENST00000573667 ATP7BP35670 1465 aa17.11■□□□□ 0.33
ABR-222ENST00000573667 NGDNQ8NEJ9 315 aaKnown RBP17.1■□□□□ 0.33
ABR-222ENST00000573667 CDK19Q9BWU1 502 aa17.1■□□□□ 0.33
ABR-222ENST00000573667 CENPJQ9HC77 1338 aaPredicted RBP17.1■□□□□ 0.33
ABR-222ENST00000573667 ARHGEF10O15013 1369 aa17.1■□□□□ 0.33
ABR-222ENST00000573667 ROCK2O75116 1388 aaKnown RBP17.1■□□□□ 0.33
ABR-222ENST00000573667 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.1■□□□□ 0.33
ABR-222ENST00000573667 NUDT16Q96DE0 195 aaKnown RBP17.09■□□□□ 0.33
ABR-222ENST00000573667 USP21Q9UK80 565 aa17.09■□□□□ 0.33
ABR-222ENST00000573667 QTRT2Q9H974 415 aaKnown RBP17.08■□□□□ 0.32
ABR-222ENST00000573667 PLCH1Q4KWH8 1693 aa17.07■□□□□ 0.32
ABR-222ENST00000573667 CDK12Q9NYV4 1490 aaPredicted RBP17.07■□□□□ 0.32
ABR-222ENST00000573667 PLEKHG5O94827 1062 aa17.06■□□□□ 0.32
ABR-222ENST00000573667 RBM6P78332 1123 aaKnown RBP17.06■□□□□ 0.32
ABR-222ENST00000573667 SRPK2P78362 688 aaKnown RBP17.06■□□□□ 0.32
ABR-222ENST00000573667 NWD2Q9ULI1 1742 aa17.06■□□□□ 0.32
ABR-222ENST00000573667 PAK3O75914 559 aaPredicted RBP17.05■□□□□ 0.32
ABR-222ENST00000573667 FNBP4Q8N3X1 1017 aaPredicted RBP17.05■□□□□ 0.32
ABR-222ENST00000573667 TRPC5Q9UL62 973 aaPredicted RBP17.05■□□□□ 0.32
ABR-222ENST00000573667 CCDC61Q9Y6R9 512 aa17.05■□□□□ 0.32
ABR-222ENST00000573667 CRYBG1Q9Y4K1 1723 aa17.04■□□□□ 0.32
ABR-222ENST00000573667 CABLES1Q8TDN4 633 aa17.03■□□□□ 0.32
ABR-222ENST00000573667 NBPF8Q3BBV2 869 aa17.02■□□□□ 0.32
ABR-222ENST00000573667 PHRF1Q9P1Y6 1649 aaKnown RBP17.01■□□□□ 0.31
ABR-222ENST00000573667 ATRNO75882 1429 aa17.01■□□□□ 0.31
ABR-222ENST00000573667 PPIP5K1Q6PFW1 1433 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms