RNA–Protein interactions for RNA: ENST00000572383.1

PFN1-202, Transcript of profilin 1, humanhuman

TSL 3

Gene PFN1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-202ENST00000572383 CCER1Q8TC90 406 aaPredicted RBP26.08■■□□□ 1.77
PFN1-202ENST00000572383 ADGRB1O14514 1584 aa26.07■■□□□ 1.76
PFN1-202ENST00000572383 CLSPNQ9HAW4 1339 aa26.07■■□□□ 1.76
PFN1-202ENST00000572383 MST1RQ04912 1400 aa26.06■■□□□ 1.76
PFN1-202ENST00000572383 ABCC11Q96J66 1382 aa26.06■■□□□ 1.76
PFN1-202ENST00000572383 TECPR2O15040 1411 aa26.05■■□□□ 1.76
PFN1-202ENST00000572383 KNDC1Q76NI1 1749 aa26.05■■□□□ 1.76
PFN1-202ENST00000572383 JCADQ9P266 1359 aa26.04■■□□□ 1.76
PFN1-202ENST00000572383 BRINP3Q76B58 766 aa26.03■■□□□ 1.76
PFN1-202ENST00000572383 KIAA1210Q9ULL0 1709 aa26.02■■□□□ 1.76
PFN1-202ENST00000572383 LRP6O75581 1613 aa26■■□□□ 1.75
PFN1-202ENST00000572383 NBPF1Q3BBV0 1214 aa26■■□□□ 1.75
PFN1-202ENST00000572383 WAPLQ7Z5K2 1190 aa26■■□□□ 1.75
PFN1-202ENST00000572383 PLEKHH1Q9ULM0 1364 aa25.98■■□□□ 1.75
PFN1-202ENST00000572383 NBPF8Q3BBV2 869 aa25.98■■□□□ 1.75
PFN1-202ENST00000572383 TRAK1Q9UPV9 953 aa25.98■■□□□ 1.75
PFN1-202ENST00000572383 TRPM1Q7Z4N2 1603 aa25.96■■□□□ 1.75
PFN1-202ENST00000572383 SIRT1Q96EB6 747 aa25.96■■□□□ 1.75
PFN1-202ENST00000572383 DLC1Q96QB1 1528 aa25.95■■□□□ 1.74
PFN1-202ENST00000572383 C1orf167Q5SNV9 1468 aa25.93■■□□□ 1.74
PFN1-202ENST00000572383 POTEAQ6S8J7 498 aa25.93■■□□□ 1.74
PFN1-202ENST00000572383 PRAM1Q96QH2 718 aa25.93■■□□□ 1.74
PFN1-202ENST00000572383 CDC42BPGQ6DT37 1551 aa25.92■■□□□ 1.74
PFN1-202ENST00000572383 SPATA31A6Q5VVP1 1343 aa25.91■■□□□ 1.74
PFN1-202ENST00000572383 SAFB2Q14151 953 aaKnown RBP eCLIP25.9■■□□□ 1.74
PFN1-202ENST00000572383 POGKQ9P215 609 aa25.9■■□□□ 1.74
PFN1-202ENST00000572383 ARHGEF28Q8N1W1 1705 aaKnown RBP25.88■■□□□ 1.73
PFN1-202ENST00000572383 RGPD8O14715 1765 aaPredicted RBP25.88■■□□□ 1.73
PFN1-202ENST00000572383 ROCK2O75116 1388 aaKnown RBP25.88■■□□□ 1.73
PFN1-202ENST00000572383 TIMELESSQ9UNS1 1208 aa25.88■■□□□ 1.73
PFN1-202ENST00000572383 DDX17Q92841 729 aaKnown RBP25.87■■□□□ 1.73
PFN1-202ENST00000572383 LRRC59Q96AG4 307 aaKnown RBP25.85■■□□□ 1.73
PFN1-202ENST00000572383 FMN2Q9NZ56 1722 aa25.85■■□□□ 1.73
PFN1-202ENST00000572383 RALGAPBQ86X10 1494 aa25.84■■□□□ 1.73
PFN1-202ENST00000572383 ORAI2Q96SN7 254 aa25.82■■□□□ 1.72
PFN1-202ENST00000572383 GPRASP1Q5JY77 1395 aa25.82■■□□□ 1.72
PFN1-202ENST00000572383 MINK1Q8N4C8 1332 aaPredicted RBP25.8■■□□□ 1.72
PFN1-202ENST00000572383 HIRIP3Q9BW71 556 aaPredicted RBP25.79■■□□□ 1.72
PFN1-202ENST00000572383 CARD11Q9BXL7 1154 aa25.78■■□□□ 1.72
PFN1-202ENST00000572383 PNPLA6Q8IY17 1366 aa25.78■■□□□ 1.72
PFN1-202ENST00000572383 COL22A1Q8NFW1 1626 aaPredicted RBP25.77■■□□□ 1.72
PFN1-202ENST00000572383 MARF1Q9Y4F3 1742 aaKnown RBP25.77■■□□□ 1.72
PFN1-202ENST00000572383 NUTM2FA1L443 756 aa25.77■■□□□ 1.72
PFN1-202ENST00000572383 MEX3CQ5U5Q3 659 aaKnown RBP25.77■■□□□ 1.72
PFN1-202ENST00000572383 SOS2Q07890 1332 aaPredicted RBP25.77■■□□□ 1.72
PFN1-202ENST00000572383 ADGRB2O60241 1585 aa25.77■■□□□ 1.72
PFN1-202ENST00000572383 CENPJQ9HC77 1338 aaPredicted RBP25.75■■□□□ 1.71
PFN1-202ENST00000572383 NUTM2BA6NNL0 878 aaPredicted RBP25.75■■□□□ 1.71
PFN1-202ENST00000572383 NUTM2EB1AL46 878 aaPredicted RBP25.75■■□□□ 1.71
PFN1-202ENST00000572383 ESCO1Q5FWF5 840 aa25.75■■□□□ 1.71
PFN1-202ENST00000572383 NUTM2AQ8IVF1 878 aaPredicted RBP25.75■■□□□ 1.71
PFN1-202ENST00000572383 NPHP3Q7Z494 1330 aa25.72■■□□□ 1.71
PFN1-202ENST00000572383 KIF1AQ12756 1690 aa25.71■■□□□ 1.71
PFN1-202ENST00000572383 QRICH2Q9H0J4 1663 aa25.71■■□□□ 1.71
PFN1-202ENST00000572383 PXDNQ92626 1479 aa25.71■■□□□ 1.71
PFN1-202ENST00000572383 EIF3AQ14152 1382 aaKnown RBP25.7■■□□□ 1.71
PFN1-202ENST00000572383 WASLO00401 505 aaPredicted RBP25.7■■□□□ 1.7
PFN1-202ENST00000572383 ZNF772Q68DY9 489 aaPredicted RBP25.69■■□□□ 1.7
PFN1-202ENST00000572383 USP32Q8NFA0 1604 aa25.66■■□□□ 1.7
PFN1-202ENST00000572383 FOXO3O43524 673 aa25.66■■□□□ 1.7
PFN1-202ENST00000572383 AFF2P51816 1311 aa25.65■■□□□ 1.7
PFN1-202ENST00000572383 CDK19Q9BWU1 502 aa25.65■■□□□ 1.7
PFN1-202ENST00000572383 TULP4Q9NRJ4 1543 aa25.64■■□□□ 1.7
PFN1-202ENST00000572383 PRR36Q9H6K5 1346 aa25.63■■□□□ 1.69
PFN1-202ENST00000572383 ANKARQ7Z5J8 1434 aa25.63■■□□□ 1.69
PFN1-202ENST00000572383 C8orf37Q96NL8 207 aa25.6■■□□□ 1.69
PFN1-202ENST00000572383 PHF8Q9UPP1 1060 aa25.59■■□□□ 1.69
PFN1-202ENST00000572383 ATP7BP35670 1465 aa25.59■■□□□ 1.69
PFN1-202ENST00000572383 ABCA3Q99758 1704 aa25.58■■□□□ 1.69
PFN1-202ENST00000572383 XPCQ01831 940 aaPredicted RBP25.58■■□□□ 1.69
PFN1-202ENST00000572383 NUDT16Q96DE0 195 aaKnown RBP25.58■■□□□ 1.69
PFN1-202ENST00000572383 CDK12Q9NYV4 1490 aaPredicted RBP25.58■■□□□ 1.69
PFN1-202ENST00000572383 USP47Q96K76 1375 aa25.57■■□□□ 1.68
PFN1-202ENST00000572383 ST20-MTHFSA0A0A6YYL1 179 aa25.57■■□□□ 1.68
PFN1-202ENST00000572383 ADAMTS2O95450 1211 aa25.57■■□□□ 1.68
PFN1-202ENST00000572383 SRPK2P78362 688 aaKnown RBP25.57■■□□□ 1.68
PFN1-202ENST00000572383 CABP2Q9NPB3 220 aa25.57■■□□□ 1.68
PFN1-202ENST00000572383 SBNO2Q9Y2G9 1366 aa25.56■■□□□ 1.68
PFN1-202ENST00000572383 PMFBP1Q8TBY8 1022 aa25.56■■□□□ 1.68
PFN1-202ENST00000572383 EVC2Q86UK5 1308 aa25.56■■□□□ 1.68
PFN1-202ENST00000572383 RXRBP28702 533 aa25.55■■□□□ 1.68
PFN1-202ENST00000572383 KRT28Q7Z3Y7 464 aa25.54■■□□□ 1.68
PFN1-202ENST00000572383 NGLY1Q96IV0 654 aa25.53■■□□□ 1.68
PFN1-202ENST00000572383 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.53■■□□□ 1.68
PFN1-202ENST00000572383 SPATA31A3Q5VYP0 1347 aa25.53■■□□□ 1.68
PFN1-202ENST00000572383 ITSN1Q15811 1721 aa25.52■■□□□ 1.68
PFN1-202ENST00000572383 TRPM3Q9HCF6 1732 aaPredicted RBP25.52■■□□□ 1.68
PFN1-202ENST00000572383 PSME1Q06323 249 aa25.52■■□□□ 1.68
PFN1-202ENST00000572383 TOPAZ1Q8N9V7 1692 aa25.52■■□□□ 1.68
PFN1-202ENST00000572383 TESK2Q96S53 571 aa25.51■■□□□ 1.67
PFN1-202ENST00000572383 CCDC61Q9Y6R9 512 aa25.51■■□□□ 1.67
PFN1-202ENST00000572383 RGS12O14924 1447 aa25.5■■□□□ 1.67
PFN1-202ENST00000572383 QTRT2Q9H974 415 aaKnown RBP25.5■■□□□ 1.67
PFN1-202ENST00000572383 TNS3Q68CZ2 1445 aa25.49■■□□□ 1.67
PFN1-202ENST00000572383 SBNO1A3KN83 1393 aa25.49■■□□□ 1.67
PFN1-202ENST00000572383 PPIP5K1Q6PFW1 1433 aa25.47■■□□□ 1.67
PFN1-202ENST00000572383 ALS2Q96Q42 1657 aa25.47■■□□□ 1.67
PFN1-202ENST00000572383 PLCH1Q4KWH8 1693 aa25.46■■□□□ 1.67
PFN1-202ENST00000572383 FNBP4Q8N3X1 1017 aaPredicted RBP25.46■■□□□ 1.67
PFN1-202ENST00000572383 NGDNQ8NEJ9 315 aaKnown RBP25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms